RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 ACTR5Q9H9F9 607 aaPredicted RBP6.39□□□□□ -1.39
VPS33B-203ENST00000554264 KCNK12Q9HB15 430 aa6.39□□□□□ -1.39
VPS33B-203ENST00000554264 TNFRSF10DQ9UBN6 386 aa6.39□□□□□ -1.39
VPS33B-203ENST00000554264 RAPGEFL1Q9UHV5 662 aa6.39□□□□□ -1.39
VPS33B-203ENST00000554264 GPR55Q9Y2T6 319 aaPredicted RBP6.39□□□□□ -1.39
VPS33B-203ENST00000554264 BZW2Q9Y6E2 419 aaKnown RBP6.39□□□□□ -1.39
VPS33B-203ENST00000554264 SPTBN5Q9NRC6 3674 aaKnown RBP6.38□□□□□ -1.39
VPS33B-203ENST00000554264 CCDC188H7C350 402 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 STXBP3O00186 592 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 KLRC4O43908 158 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 AKR1B10O60218 316 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 FSBPO95073 299 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 KCNH1O95259 989 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 SLC25A27O95847 323 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 TIMP1P01033 207 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 OR52Z1P0C646 297 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 FCER1AP12319 257 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 AKR1A1P14550 325 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 RAC2P15153 192 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 MCM7P33993 719 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 KIF11P52732 1056 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 IFFO1Q0D2I5 559 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 GRB10Q13322 594 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 RAB30Q15771 203 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 SLC10A6Q3KNW5 377 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 SV2CQ496J9 727 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 PRAMEF19Q5SWL8 479 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 PPP4R3AQ6IN85 833 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 UNC13DQ70J99 1090 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 NLRX1Q86UT6 975 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 IRF2BP1Q8IU81 584 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 SPPL2CQ8IUH8 684 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 TEX2Q8IWB9 1127 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 CNPY4Q8N129 248 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 SLC44A5Q8NCS7 719 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 SPATA4Q8NEY3 305 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 BCAS4Q8TDM0 211 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 CABS1Q96KC9 395 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 CNOT6LQ96LI5 555 aaKnown RBP6.38□□□□□ -1.39
VPS33B-203ENST00000554264 JMJD8Q96S16 334 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 OSBPL9Q96SU4 736 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 CHP1Q99653 195 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 NCAPGQ9BPX3 1015 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 SPZ1Q9BXG8 430 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 KRTAP4-8Q9BYQ9 185 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 GLT8D2Q9H1C3 349 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 MTIF3Q9H2K0 278 aaKnown RBP6.38□□□□□ -1.39
VPS33B-203ENST00000554264 PRDM12Q9H4Q4 367 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 C6orf50Q9HD87 102 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 STARD7Q9NQZ5 370 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 CEP72Q9P209 647 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 MSRAQ9UJ68 235 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 RNF114Q9Y508 228 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 PCDHA13Q9Y5I0 950 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 FAM169AQ9Y6X4 670 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 MROH7Q68CQ1 1323 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 EYSQ5T1H1 3165 aa6.38□□□□□ -1.39
VPS33B-203ENST00000554264 MYH7BA7E2Y1 1941 aa6.37□□□□□ -1.39
VPS33B-203ENST00000554264 KDM3AQ9Y4C1 1321 aa6.37□□□□□ -1.39
VPS33B-203ENST00000554264 TSPY2A6NKD2 308 aa6.37□□□□□ -1.39
VPS33B-203ENST00000554264 B4DLN1 442 aa6.37□□□□□ -1.39
VPS33B-203ENST00000554264 ARNTLO00327 626 aa6.37□□□□□ -1.39
VPS33B-203ENST00000554264 PES1O00541 588 aaKnown RBP6.37□□□□□ -1.39
VPS33B-203ENST00000554264 NDUFAB1O14561 156 aa6.37□□□□□ -1.39
VPS33B-203ENST00000554264 MEFVO15553 781 aaPredicted RBP6.37□□□□□ -1.39
VPS33B-203ENST00000554264 KIF1CO43896 1103 aaKnown RBP6.37□□□□□ -1.39
VPS33B-203ENST00000554264 N4BP1O75113 896 aaKnown RBP6.37□□□□□ -1.39
VPS33B-203ENST00000554264 GFPT2O94808 682 aa6.37□□□□□ -1.39
VPS33B-203ENST00000554264 PLEKHA8P1O95397 391 aa6.37□□□□□ -1.39
VPS33B-203ENST00000554264 PGK1P00558 417 aa6.37□□□□□ -1.39
VPS33B-203ENST00000554264 SERPING1P05155 500 aa6.37□□□□□ -1.39
VPS33B-203ENST00000554264 SHMT1P34896 483 aa6.37□□□□□ -1.39
VPS33B-203ENST00000554264 COPB2P35606 906 aa6.37□□□□□ -1.39
VPS33B-203ENST00000554264 MAGEA1P43355 309 aa6.37□□□□□ -1.39
VPS33B-203ENST00000554264 DYNLL1P63167 89 aaKnown RBP6.37□□□□□ -1.39
VPS33B-203ENST00000554264 CHRNEQ04844 493 aa6.37□□□□□ -1.39
VPS33B-203ENST00000554264 PDIA5Q14554 519 aa6.37□□□□□ -1.39
VPS33B-203ENST00000554264 PLS1Q14651 629 aa6.37□□□□□ -1.39
VPS33B-203ENST00000554264 NONOQ15233 471 aaKnown RBP eCLIP6.37□□□□□ -1.39
VPS33B-203ENST00000554264 SF1Q15637 639 aaKnown RBP6.37□□□□□ -1.39
VPS33B-203ENST00000554264 AAK1Q2M2I8 961 aa6.37□□□□□ -1.39
VPS33B-203ENST00000554264 HSF5Q4G112 596 aaPredicted RBP6.37□□□□□ -1.39
VPS33B-203ENST00000554264 CENPPQ6IPU0 288 aa6.37□□□□□ -1.39
VPS33B-203ENST00000554264 MFSD5Q6N075 450 aa6.37□□□□□ -1.39
VPS33B-203ENST00000554264 PSRC1Q6PGN9 363 aaPredicted RBP6.37□□□□□ -1.39
VPS33B-203ENST00000554264 CACNA2D4Q7Z3S7 1137 aa6.37□□□□□ -1.39
VPS33B-203ENST00000554264 CABP7Q86V35 215 aa6.37□□□□□ -1.39
VPS33B-203ENST00000554264 ZNF227Q86WZ6 799 aa6.37□□□□□ -1.39
VPS33B-203ENST00000554264 TRIM59Q8IWR1 403 aa6.37□□□□□ -1.39
VPS33B-203ENST00000554264 TMEM199Q8N511 208 aa6.37□□□□□ -1.39
VPS33B-203ENST00000554264 SRBD1Q8N5C6 995 aaKnown RBP6.37□□□□□ -1.39
VPS33B-203ENST00000554264 OTUD6BQ8N6M0 293 aa6.37□□□□□ -1.39
VPS33B-203ENST00000554264 PRPF38AQ8NAV1 312 aaKnown RBP6.37□□□□□ -1.39
VPS33B-203ENST00000554264 MAGEC3Q8TD91 643 aa6.37□□□□□ -1.39
VPS33B-203ENST00000554264 LMBR1Q8WVP7 490 aa6.37□□□□□ -1.39
VPS33B-203ENST00000554264 PPP1R14AQ96A00 147 aa6.37□□□□□ -1.39
VPS33B-203ENST00000554264 PBKQ96KB5 322 aa6.37□□□□□ -1.39
VPS33B-203ENST00000554264 PTCHD1Q96NR3 888 aa6.37□□□□□ -1.39
VPS33B-203ENST00000554264 FAM129AQ9BZQ8 928 aa6.37□□□□□ -1.39
VPS33B-203ENST00000554264 TRIM9Q9C026 710 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms