RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 IPO8O15397 1037 aaKnown RBP3.72□□□□□ -1.81
SLIRP-202ENST00000553981 LINC01565O15544 149 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 GPAA1O43292 621 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 CLASP2O75122 1294 aaKnown RBP3.72□□□□□ -1.81
SLIRP-202ENST00000553981 CXCL10P02778 98 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 MYL3P08590 195 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 SRGAP2CP0DJJ0 459 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 TCF3P15923 654 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 MAKP20794 623 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 MEOX1P50221 254 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 TFAP4Q01664 338 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 GUCY1A3Q02108 690 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 NHLH1Q02575 133 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 CAMK1Q14012 370 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 RAB33AQ14088 237 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 TTF1Q15361 905 aaPredicted RBP3.72□□□□□ -1.81
SLIRP-202ENST00000553981 CRY1Q16526 586 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 LY6KQ17RY6 165 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 DUSP28Q4G0W2 176 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 IQSEC1Q6DN90 963 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 EP400NLQ6ZTU2 488 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 ZNF627Q7L945 461 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 SGMS1Q86VZ5 419 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 TMPRSS6Q8IU80 811 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 SCUBE1Q8IWY4 988 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 D2HGDHQ8N465 521 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 GMCL1P1Q8NEA9 526 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 PRSS33Q8NF86 280 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 OR14K1Q8NGZ2 314 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 NEK9Q8TD19 979 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 STAG1Q8WVM7 1258 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 ZNF669Q96BR6 464 aaPredicted RBP3.72□□□□□ -1.81
SLIRP-202ENST00000553981 KIF1BPQ96EK5 621 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 TMEM176AQ96HP8 235 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 SPATA9Q9BWV2 254 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 WDR11Q9BZH6 1224 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 RANBP17Q9H2T7 1088 aaKnown RBP3.72□□□□□ -1.81
SLIRP-202ENST00000553981 UBE2ZQ9H832 354 aaPredicted RBP3.72□□□□□ -1.81
SLIRP-202ENST00000553981 ACAD9Q9H845 621 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 AGO3Q9H9G7 860 aaKnown RBP3.72□□□□□ -1.81
SLIRP-202ENST00000553981 SMURF1Q9HCE7 757 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 UCKL1Q9NWZ5 548 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 FEM1BQ9UK73 627 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 MTUS1Q9ULD2 1270 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 HDAC5Q9UQL6 1122 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 GIT1Q9Y2X7 761 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 Q9Y3F1 56 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 PLXNA3P51805 1871 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 DOCK5Q9H7D0 1870 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 BRWD1Q9NSI6 2320 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 MYH7BA7E2Y1 1941 aa3.72□□□□□ -1.81
SLIRP-202ENST00000553981 MYO7AQ13402 2215 aa3.71□□□□□ -1.82
SLIRP-202ENST00000553981 NLRC5Q86WI3 1866 aa3.71□□□□□ -1.82
SLIRP-202ENST00000553981 KMT2EQ8IZD2 1858 aa3.71□□□□□ -1.82
SLIRP-202ENST00000553981 ZNF318Q5VUA4 2279 aa3.71□□□□□ -1.82
SLIRP-202ENST00000553981 PMS2P1A4D2B8 440 aa3.71□□□□□ -1.82
SLIRP-202ENST00000553981 CAPN14A8MX76 684 aa3.71□□□□□ -1.82
SLIRP-202ENST00000553981 HAS3O00219 553 aa3.71□□□□□ -1.82
SLIRP-202ENST00000553981 RNF113AO15541 343 aaKnown RBP3.71□□□□□ -1.82
SLIRP-202ENST00000553981 SLC26A4O43511 780 aa3.71□□□□□ -1.82
SLIRP-202ENST00000553981 ZBED4O75132 1171 aa3.71□□□□□ -1.82
SLIRP-202ENST00000553981 TTLL1O95922 423 aa3.71□□□□□ -1.82
SLIRP-202ENST00000553981 MMEP08473 750 aa3.71□□□□□ -1.82
SLIRP-202ENST00000553981 CKBP12277 381 aa3.71□□□□□ -1.82
SLIRP-202ENST00000553981 STAT5BP51692 787 aa3.71□□□□□ -1.82
SLIRP-202ENST00000553981 OAZ1P54368 228 aa3.71□□□□□ -1.82
SLIRP-202ENST00000553981 ERVK-21P61565 698 aa3.71□□□□□ -1.82
SLIRP-202ENST00000553981 SP2Q02086 613 aa3.71□□□□□ -1.82
SLIRP-202ENST00000553981 HHEXQ03014 270 aa3.71□□□□□ -1.82
SLIRP-202ENST00000553981 PPARAQ07869 468 aa3.71□□□□□ -1.82
SLIRP-202ENST00000553981 ARHGAP1Q07960 439 aa3.71□□□□□ -1.82
SLIRP-202ENST00000553981 TCF15Q12870 199 aa3.71□□□□□ -1.82
SLIRP-202ENST00000553981 SEC23AQ15436 765 aa3.71□□□□□ -1.82
SLIRP-202ENST00000553981 LEXMQ3ZCV2 418 aa3.71□□□□□ -1.82
SLIRP-202ENST00000553981 TCEAL5Q5H9L2 206 aa3.71□□□□□ -1.82
SLIRP-202ENST00000553981 ZNF618Q5T7W0 954 aa3.71□□□□□ -1.82
SLIRP-202ENST00000553981 FOXB2Q5VYV0 432 aa3.71□□□□□ -1.82
SLIRP-202ENST00000553981 GRAMD4Q6IC98 578 aa3.71□□□□□ -1.82
SLIRP-202ENST00000553981 PCSK4Q6UW60 755 aa3.71□□□□□ -1.82
SLIRP-202ENST00000553981 BTNL9Q6UXG8 535 aa3.71□□□□□ -1.82
SLIRP-202ENST00000553981 NOL8Q76FK4 1167 aaKnown RBP3.71□□□□□ -1.82
SLIRP-202ENST00000553981 SPATC1Q76KD6 591 aa3.71□□□□□ -1.82
SLIRP-202ENST00000553981 MRGPRGQ86SM5 289 aa3.71□□□□□ -1.82
SLIRP-202ENST00000553981 ADGRE4PQ86SQ3 457 aa3.71□□□□□ -1.82
SLIRP-202ENST00000553981 CERS3Q8IU89 383 aa3.71□□□□□ -1.82
SLIRP-202ENST00000553981 CLASRPQ8N2M8 674 aaKnown RBP3.71□□□□□ -1.82
SLIRP-202ENST00000553981 KBTBD3Q8NAB2 608 aa3.71□□□□□ -1.82
SLIRP-202ENST00000553981 OR6J1Q8NGC5 347 aa3.71□□□□□ -1.82
SLIRP-202ENST00000553981 AFG1LQ8WV93 481 aa3.71□□□□□ -1.82
SLIRP-202ENST00000553981 APPBP2Q92624 585 aa3.71□□□□□ -1.82
SLIRP-202ENST00000553981 ZBTB10Q96DT7 871 aa3.71□□□□□ -1.82
SLIRP-202ENST00000553981 CLIP3Q96DZ5 547 aa3.71□□□□□ -1.82
SLIRP-202ENST00000553981 TAAR1Q96RJ0 339 aa3.71□□□□□ -1.82
SLIRP-202ENST00000553981 AGAP2Q99490 1192 aa3.71□□□□□ -1.82
SLIRP-202ENST00000553981 C1QTNF1Q9BXJ1 281 aa3.71□□□□□ -1.82
SLIRP-202ENST00000553981 OR10A5Q9H207 317 aa3.71□□□□□ -1.82
SLIRP-202ENST00000553981 IL25Q9H293 177 aa3.71□□□□□ -1.82
SLIRP-202ENST00000553981 ARPP21Q9UBL0 812 aaPredicted RBP3.71□□□□□ -1.82
SLIRP-202ENST00000553981 HDAC6Q9UBN7 1215 aa3.71□□□□□ -1.82
SLIRP-202ENST00000553981 KIAA1671Q9BY89 1806 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms