RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 LRIT3Q3SXY7 679 aa15.34■□□□□ 0.05
SHMT2-210ENST00000553950 CCDC122Q5T0U0 273 aa15.34■□□□□ 0.05
SHMT2-210ENST00000553950 NAA35Q5VZE5 725 aa15.34■□□□□ 0.05
SHMT2-210ENST00000553950 ACAD10Q6JQN1 1059 aa15.34■□□□□ 0.05
SHMT2-210ENST00000553950 PRSS55Q6UWB4 352 aaPredicted RBP15.34■□□□□ 0.05
SHMT2-210ENST00000553950 PHF13Q86YI8 300 aaPredicted RBP15.34■□□□□ 0.05
SHMT2-210ENST00000553950 PASD1Q8IV76 773 aa15.34■□□□□ 0.05
SHMT2-210ENST00000553950 C1orf131Q8NDD1 294 aaKnown RBP15.34■□□□□ 0.05
SHMT2-210ENST00000553950 PPP2R3CQ969Q6 453 aa15.34■□□□□ 0.05
SHMT2-210ENST00000553950 CALR3Q96L12 384 aaKnown RBP15.34■□□□□ 0.05
SHMT2-210ENST00000553950 B3GALT6Q96L58 329 aa15.34■□□□□ 0.05
SHMT2-210ENST00000553950 DUSP16Q9BY84 665 aa15.34■□□□□ 0.05
SHMT2-210ENST00000553950 SYNCQ9H7C4 482 aa15.34■□□□□ 0.05
SHMT2-210ENST00000553950 ABI2Q9NYB9 513 aaPredicted RBP15.34■□□□□ 0.05
SHMT2-210ENST00000553950 AFF4Q9UHB7 1163 aaKnown RBP15.34■□□□□ 0.05
SHMT2-210ENST00000553950 DPP7Q9UHL4 492 aa15.34■□□□□ 0.05
SHMT2-210ENST00000553950 NENFQ9UMX5 172 aa15.34■□□□□ 0.05
SHMT2-210ENST00000553950 ZKSCAN5Q9Y2L8 839 aa15.34■□□□□ 0.05
SHMT2-210ENST00000553950 MTMR11A4FU01 709 aa15.33■□□□□ 0.04
SHMT2-210ENST00000553950 ANKRD62A6NC57 917 aa15.33■□□□□ 0.04
SHMT2-210ENST00000553950 ATP2C2O75185 946 aa15.33■□□□□ 0.04
SHMT2-210ENST00000553950 H2AFZP0C0S5 128 aa15.33■□□□□ 0.04
SHMT2-210ENST00000553950 UNGP13051 313 aaPredicted RBP15.33■□□□□ 0.04
SHMT2-210ENST00000553950 PBX2P40425 430 aa15.33■□□□□ 0.04
SHMT2-210ENST00000553950 VAV2P52735 878 aa15.33■□□□□ 0.04
SHMT2-210ENST00000553950 RPL10AP62906 217 aaKnown RBP15.33■□□□□ 0.04
SHMT2-210ENST00000553950 PDCLQ13371 301 aa15.33■□□□□ 0.04
SHMT2-210ENST00000553950 PLD1Q13393 1074 aa15.33■□□□□ 0.04
SHMT2-210ENST00000553950 RAB33AQ14088 237 aa15.33■□□□□ 0.04
SHMT2-210ENST00000553950 PKDCCQ504Y2 493 aa15.33■□□□□ 0.04
SHMT2-210ENST00000553950 LIN9Q5TKA1 542 aa15.33■□□□□ 0.04
SHMT2-210ENST00000553950 H2AFVQ71UI9 128 aa15.33■□□□□ 0.04
SHMT2-210ENST00000553950 TAS1R1Q7RTX1 841 aa15.33■□□□□ 0.04
SHMT2-210ENST00000553950 TTC30AQ86WT1 665 aa15.33■□□□□ 0.04
SHMT2-210ENST00000553950 ZDHHC17Q8IUH5 632 aa15.33■□□□□ 0.04
SHMT2-210ENST00000553950 SPPL3Q8TCT6 385 aa15.33■□□□□ 0.04
SHMT2-210ENST00000553950 SECISBP2LQ93073 1101 aaKnown RBP15.33■□□□□ 0.04
SHMT2-210ENST00000553950 HSFY1Q96LI6 401 aa15.33■□□□□ 0.04
SHMT2-210ENST00000553950 ZSWIM1Q9BR11 485 aa15.33■□□□□ 0.04
SHMT2-210ENST00000553950 B3GNT5Q9BYG0 378 aa15.33■□□□□ 0.04
SHMT2-210ENST00000553950 UBXN6Q9BZV1 441 aa15.33■□□□□ 0.04
SHMT2-210ENST00000553950 ISCUQ9H1K1 167 aa15.33■□□□□ 0.04
SHMT2-210ENST00000553950 CSNK1G1Q9HCP0 422 aa15.33■□□□□ 0.04
SHMT2-210ENST00000553950 EHD2Q9NZN4 543 aa15.33■□□□□ 0.04
SHMT2-210ENST00000553950 WDR35Q9P2L0 1181 aa15.33■□□□□ 0.04
SHMT2-210ENST00000553950 MTUS1Q9ULD2 1270 aa15.33■□□□□ 0.04
SHMT2-210ENST00000553950 SCINQ9Y6U3 715 aa15.33■□□□□ 0.04
SHMT2-210ENST00000553950 GREB1Q4ZG55 1949 aa15.33■□□□□ 0.04
SHMT2-210ENST00000553950 FSCN2O14926 492 aa15.32■□□□□ 0.04
SHMT2-210ENST00000553950 SART1O43290 800 aaKnown RBP15.32■□□□□ 0.04
SHMT2-210ENST00000553950 KRT86O43790 486 aa15.32■□□□□ 0.04
SHMT2-210ENST00000553950 TMEM253P0C7T8 217 aa15.32■□□□□ 0.04
SHMT2-210ENST00000553950 MMP8P22894 467 aa15.32■□□□□ 0.04
SHMT2-210ENST00000553950 OR1D2P34982 312 aa15.32■□□□□ 0.04
SHMT2-210ENST00000553950 GPD2P43304 727 aa15.32■□□□□ 0.04
SHMT2-210ENST00000553950 MAGEA1P43355 309 aa15.32■□□□□ 0.04
SHMT2-210ENST00000553950 TUFMP49411 452 aaKnown RBP15.32■□□□□ 0.04
SHMT2-210ENST00000553950 ARPP19P56211 112 aa15.32■□□□□ 0.04
SHMT2-210ENST00000553950 GSCP56915 257 aaPredicted RBP15.32■□□□□ 0.04
SHMT2-210ENST00000553950 MTF1Q14872 753 aa15.32■□□□□ 0.04
SHMT2-210ENST00000553950 PRPF38BQ5VTL8 546 aaKnown RBP15.32■□□□□ 0.04
SHMT2-210ENST00000553950 PLPP4Q5VZY2 271 aa15.32■□□□□ 0.04
SHMT2-210ENST00000553950 DENND1BQ6P3S1 775 aa15.32■□□□□ 0.04
SHMT2-210ENST00000553950 ZNF662Q6ZS27 426 aa15.32■□□□□ 0.04
SHMT2-210ENST00000553950 CLEC20AQ6ZU45 233 aa15.32■□□□□ 0.04
SHMT2-210ENST00000553950 RTL10Q7L3V2 364 aa15.32■□□□□ 0.04
SHMT2-210ENST00000553950 ERICH1Q86X53 443 aa15.32■□□□□ 0.04
SHMT2-210ENST00000553950 ZNF461Q8TAF7 563 aa15.32■□□□□ 0.04
SHMT2-210ENST00000553950 OLIG1Q8TAK6 271 aa15.32■□□□□ 0.04
SHMT2-210ENST00000553950 TMEM209Q96SK2 561 aa15.32■□□□□ 0.04
SHMT2-210ENST00000553950 TRIM62Q9BVG3 475 aa15.32■□□□□ 0.04
SHMT2-210ENST00000553950 ALG13Q9NP73 1137 aaKnown RBP15.32■□□□□ 0.04
SHMT2-210ENST00000553950 LCMT1Q9UIC8 334 aa15.32■□□□□ 0.04
SHMT2-210ENST00000553950 PCDHA13Q9Y5I0 950 aa15.32■□□□□ 0.04
SHMT2-210ENST00000553950 ADGRG1Q9Y653 693 aa15.32■□□□□ 0.04
SHMT2-210ENST00000553950 ZNF638Q14966 1978 aaKnown RBP15.31■□□□□ 0.04
SHMT2-210ENST00000553950 WDR27A2RRH5 827 aa15.31■□□□□ 0.04
SHMT2-210ENST00000553950 LILRB3O75022 631 aa15.31■□□□□ 0.04
SHMT2-210ENST00000553950 FBXO21O94952 628 aa15.31■□□□□ 0.04
SHMT2-210ENST00000553950 CXCL14O95715 111 aa15.31■□□□□ 0.04
SHMT2-210ENST00000553950 OR4Q2P0C623 313 aa15.31■□□□□ 0.04
SHMT2-210ENST00000553950 ATF2P15336 505 aa15.31■□□□□ 0.04
SHMT2-210ENST00000553950 ELF1P32519 619 aa15.31■□□□□ 0.04
SHMT2-210ENST00000553950 SCNN1AP37088 669 aa15.31■□□□□ 0.04
SHMT2-210ENST00000553950 PDE4CQ08493 712 aa15.31■□□□□ 0.04
SHMT2-210ENST00000553950 KIF5AQ12840 1032 aa15.31■□□□□ 0.04
SHMT2-210ENST00000553950 IFI16Q16666 785 aaKnown RBP15.31■□□□□ 0.04
SHMT2-210ENST00000553950 CCDC149Q6ZUS6 474 aa15.31■□□□□ 0.04
SHMT2-210ENST00000553950 TOGARAM2Q6ZUX3 1019 aa15.31■□□□□ 0.04
SHMT2-210ENST00000553950 MON1BQ7L1V2 547 aa15.31■□□□□ 0.04
SHMT2-210ENST00000553950 RHOT2Q8IXI1 618 aa15.31■□□□□ 0.04
SHMT2-210ENST00000553950 ACRBPQ8NEB7 543 aa15.31■□□□□ 0.04
SHMT2-210ENST00000553950 SLC35F5Q8WV83 523 aa15.31■□□□□ 0.04
SHMT2-210ENST00000553950 ARNTL2Q8WYA1 636 aa15.31■□□□□ 0.04
SHMT2-210ENST00000553950 KCTD13Q8WZ19 329 aa15.31■□□□□ 0.04
SHMT2-210ENST00000553950 ZNF653Q96CK0 615 aa15.31■□□□□ 0.04
SHMT2-210ENST00000553950 PPP1R13BQ96KQ4 1090 aa15.31■□□□□ 0.04
SHMT2-210ENST00000553950 C8orf48Q96LL4 319 aa15.31■□□□□ 0.04
SHMT2-210ENST00000553950 ZNF830Q96NB3 372 aaPredicted RBP15.31■□□□□ 0.04
SHMT2-210ENST00000553950 PCDHB18PQ96TA0 734 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms