RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 FAM35AQ86V20 835 aa24.73■■□□□ 1.55
NEK9-203ENST00000553945 TTC39CQ8N584 583 aa24.73■■□□□ 1.55
NEK9-203ENST00000553945 C12orf29Q8N999 325 aa24.73■■□□□ 1.55
NEK9-203ENST00000553945 SPATA17Q96L03 361 aa24.73■■□□□ 1.55
NEK9-203ENST00000553945 KXD1Q9BQD3 176 aa24.73■■□□□ 1.55
NEK9-203ENST00000553945 RPP25Q9BUL9 199 aaKnown RBP24.73■■□□□ 1.55
NEK9-203ENST00000553945 GPR88Q9GZN0 384 aa24.73■■□□□ 1.55
NEK9-203ENST00000553945 FAM49BQ9NUQ9 324 aa24.73■■□□□ 1.55
NEK9-203ENST00000553945 TMEM63CQ9P1W3 806 aa24.73■■□□□ 1.55
NEK9-203ENST00000553945 CYP4F8P98187 520 aa24.72■■□□□ 1.55
NEK9-203ENST00000553945 CUL2Q13617 745 aa24.72■■□□□ 1.55
NEK9-203ENST00000553945 FAM78AQ5JUQ0 283 aa24.72■■□□□ 1.55
NEK9-203ENST00000553945 STXBP5Q5T5C0 1151 aa24.72■■□□□ 1.55
NEK9-203ENST00000553945 GPR158Q5T848 1215 aa24.72■■□□□ 1.55
NEK9-203ENST00000553945 PAQR9Q6ZVX9 377 aa24.72■■□□□ 1.55
NEK9-203ENST00000553945 FAM114A1Q8IWE2 563 aa24.72■■□□□ 1.55
NEK9-203ENST00000553945 FUKQ8N0W3 1084 aa24.72■■□□□ 1.55
NEK9-203ENST00000553945 SLC2A14Q8TDB8 520 aa24.72■■□□□ 1.55
NEK9-203ENST00000553945 WHAMMQ8TF30 809 aa24.72■■□□□ 1.55
NEK9-203ENST00000553945 C8orf48Q96LL4 319 aa24.72■■□□□ 1.55
NEK9-203ENST00000553945 NT5C1BQ96P26 610 aa24.72■■□□□ 1.55
NEK9-203ENST00000553945 UXTQ9UBK9 157 aaPredicted RBP24.72■■□□□ 1.55
NEK9-203ENST00000553945 NARSO43776 548 aaKnown RBP24.71■■□□□ 1.55
NEK9-203ENST00000553945 HSP90AA4PQ58FG1 418 aa24.71■■□□□ 1.55
NEK9-203ENST00000553945 TRIM67Q6ZTA4 783 aa24.71■■□□□ 1.55
NEK9-203ENST00000553945 EHBP1Q8NDI1 1231 aa24.71■■□□□ 1.55
NEK9-203ENST00000553945 ZSCAN18Q8TBC5 510 aaPredicted RBP24.71■■□□□ 1.55
NEK9-203ENST00000553945 SMARCD2Q92925 531 aa24.71■■□□□ 1.55
NEK9-203ENST00000553945 TRMT2BQ96GJ1 504 aaKnown RBP24.71■■□□□ 1.55
NEK9-203ENST00000553945 SMARCD1Q96GM5 515 aa24.71■■□□□ 1.55
NEK9-203ENST00000553945 CEP295NLQ96MC4 621 aa24.71■■□□□ 1.55
NEK9-203ENST00000553945 ASB16Q96NS5 453 aa24.71■■□□□ 1.55
NEK9-203ENST00000553945 TMEM30AQ9NV96 361 aa24.71■■□□□ 1.55
NEK9-203ENST00000553945 ANO10Q9NW15 660 aa24.71■■□□□ 1.55
NEK9-203ENST00000553945 DUSP12Q9UNI6 340 aa24.71■■□□□ 1.55
NEK9-203ENST00000553945 AP1G2O75843 785 aa24.7■■□□□ 1.54
NEK9-203ENST00000553945 F11P03951 625 aa24.7■■□□□ 1.54
NEK9-203ENST00000553945 TBXAS1P24557 533 aaPredicted RBP24.7■■□□□ 1.54
NEK9-203ENST00000553945 SIGLEC14Q08ET2 396 aa24.7■■□□□ 1.54
NEK9-203ENST00000553945 STX1AQ16623 288 aa24.7■■□□□ 1.54
NEK9-203ENST00000553945 TMEM31Q5JXX7 168 aa24.7■■□□□ 1.54
NEK9-203ENST00000553945 TANGO2Q6ICL3 276 aa24.7■■□□□ 1.54
NEK9-203ENST00000553945 CAVIN1Q6NZI2 390 aaKnown RBP24.7■■□□□ 1.54
NEK9-203ENST00000553945 DENND5BQ6ZUT9 1274 aa24.7■■□□□ 1.54
NEK9-203ENST00000553945 PPM1KQ8N3J5 372 aa24.7■■□□□ 1.54
NEK9-203ENST00000553945 LMO3Q8TAP4 145 aa24.7■■□□□ 1.54
NEK9-203ENST00000553945 CYFIP2Q96F07 1278 aa24.7■■□□□ 1.54
NEK9-203ENST00000553945 MYRFLQ96LU7 910 aa24.7■■□□□ 1.54
NEK9-203ENST00000553945 INTS2Q9H0H0 1204 aaKnown RBP24.7■■□□□ 1.54
NEK9-203ENST00000553945 FAM124BQ9H5Z6 455 aaPredicted RBP24.7■■□□□ 1.54
NEK9-203ENST00000553945 C11orf16Q9NQ32 467 aa24.7■■□□□ 1.54
NEK9-203ENST00000553945 KRT82Q9NSB4 513 aa24.7■■□□□ 1.54
NEK9-203ENST00000553945 GREB1Q4ZG55 1949 aa24.69■■□□□ 1.54
NEK9-203ENST00000553945 TMEM221A6NGB7 291 aa24.69■■□□□ 1.54
NEK9-203ENST00000553945 M0R296 226 aa24.69■■□□□ 1.54
NEK9-203ENST00000553945 ECI2O75521 394 aa24.69■■□□□ 1.54
NEK9-203ENST00000553945 FCARP24071 287 aa24.69■■□□□ 1.54
NEK9-203ENST00000553945 ADORA2BP29275 332 aa24.69■■□□□ 1.54
NEK9-203ENST00000553945 YWHAEP62258 255 aaKnown RBP24.69■■□□□ 1.54
NEK9-203ENST00000553945 TMEM150AQ86TG1 271 aa24.69■■□□□ 1.54
NEK9-203ENST00000553945 ELSPBP1Q96BH3 223 aa24.69■■□□□ 1.54
NEK9-203ENST00000553945 TMEM176AQ96HP8 235 aa24.69■■□□□ 1.54
NEK9-203ENST00000553945 HEXIM2Q96MH2 286 aaKnown RBP24.69■■□□□ 1.54
NEK9-203ENST00000553945 KCNK16Q96T55 309 aa24.69■■□□□ 1.54
NEK9-203ENST00000553945 TASP1Q9H6P5 420 aa24.69■■□□□ 1.54
NEK9-203ENST00000553945 ZFP14Q9HCL3 533 aa24.69■■□□□ 1.54
NEK9-203ENST00000553945 DMAP1Q9NPF5 467 aaPredicted RBP24.69■■□□□ 1.54
NEK9-203ENST00000553945 GPR37L1O60883 481 aa24.68■■□□□ 1.54
NEK9-203ENST00000553945 RAD23BP54727 409 aa24.68■■□□□ 1.54
NEK9-203ENST00000553945 C11orf57Q6ZUT1 292 aaPredicted RBP24.68■■□□□ 1.54
NEK9-203ENST00000553945 GPIHBP1Q8IV16 184 aa24.68■■□□□ 1.54
NEK9-203ENST00000553945 SLC4A11Q8NBS3 891 aa24.68■■□□□ 1.54
NEK9-203ENST00000553945 ENOX1Q8TC92 643 aaKnown RBP24.68■■□□□ 1.54
NEK9-203ENST00000553945 MRPS31Q92665 395 aaKnown RBP24.68■■□□□ 1.54
NEK9-203ENST00000553945 HNRNPABQ99729 332 aaKnown RBP24.68■■□□□ 1.54
NEK9-203ENST00000553945 PLA2G2FQ9BZM2 168 aa24.68■■□□□ 1.54
NEK9-203ENST00000553945 SAMSN1Q9NSI8 373 aaKnown RBP24.68■■□□□ 1.54
NEK9-203ENST00000553945 EHD2Q9NZN4 543 aa24.68■■□□□ 1.54
NEK9-203ENST00000553945 GCNT4Q9P109 453 aa24.68■■□□□ 1.54
NEK9-203ENST00000553945 NFE2L3Q9Y4A8 694 aa24.68■■□□□ 1.54
NEK9-203ENST00000553945 OBSL1O75147 1896 aa24.68■■□□□ 1.54
NEK9-203ENST00000553945 SRFP11831 508 aa24.67■■□□□ 1.54
NEK9-203ENST00000553945 VIPR2P41587 438 aa24.67■■□□□ 1.54
NEK9-203ENST00000553945 USP46P62068 366 aa24.67■■□□□ 1.54
NEK9-203ENST00000553945 IFRD2Q12894 506 aaPredicted RBP24.67■■□□□ 1.54
NEK9-203ENST00000553945 MAN2A1Q16706 1144 aa24.67■■□□□ 1.54
NEK9-203ENST00000553945 RRAGAQ7L523 313 aa24.67■■□□□ 1.54
NEK9-203ENST00000553945 ARHGEF19Q8IW93 802 aa24.67■■□□□ 1.54
NEK9-203ENST00000553945 CRACR2AQ9BSW2 395 aa24.67■■□□□ 1.54
NEK9-203ENST00000553945 DENND4CQ5VZ89 1909 aa24.67■■□□□ 1.54
NEK9-203ENST00000553945 MYH10P35580 1976 aa24.66■■□□□ 1.54
NEK9-203ENST00000553945 KCNJ18B7U540 433 aa24.66■■□□□ 1.54
NEK9-203ENST00000553945 CFHP08603 1231 aa24.66■■□□□ 1.54
NEK9-203ENST00000553945 FAM200BP0CF97 657 aa24.66■■□□□ 1.54
NEK9-203ENST00000553945 PRKCSHP14314 528 aaPredicted RBP24.66■■□□□ 1.54
NEK9-203ENST00000553945 MAP3K7CLP57077 242 aa24.66■■□□□ 1.54
NEK9-203ENST00000553945 KCNJ12Q14500 433 aa24.66■■□□□ 1.54
NEK9-203ENST00000553945 ARID3BQ8IVW6 561 aaPredicted RBP24.66■■□□□ 1.54
NEK9-203ENST00000553945 NUP93Q8N1F7 819 aa24.66■■□□□ 1.54
NEK9-203ENST00000553945 MAB21L3Q8N8X9 362 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms