RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 REPS1Q96D71 796 aa5□□□□□ -1.61
SCFD1-210ENST00000553693 TRIM54Q9BYV2 358 aa5□□□□□ -1.61
SCFD1-210ENST00000553693 NRIP3Q9NQ35 241 aa5□□□□□ -1.61
SCFD1-210ENST00000553693 TRMT13Q9NUP7 481 aaKnown RBP5□□□□□ -1.61
SCFD1-210ENST00000553693 STAP2Q9UGK3 403 aa5□□□□□ -1.61
SCFD1-210ENST00000553693 CCNL1Q9UK58 526 aaPredicted RBP5□□□□□ -1.61
SCFD1-210ENST00000553693 PAXBP1Q9Y5B6 917 aa5□□□□□ -1.61
SCFD1-210ENST00000553693 WDR91A4D1P6 747 aa4.99□□□□□ -1.61
SCFD1-210ENST00000553693 SMIM22K7EJ46 135 aa4.99□□□□□ -1.61
SCFD1-210ENST00000553693 ERC2O15083 957 aa4.99□□□□□ -1.61
SCFD1-210ENST00000553693 AKAP10O43572 662 aa4.99□□□□□ -1.61
SCFD1-210ENST00000553693 MARCH6O60337 910 aa4.99□□□□□ -1.61
SCFD1-210ENST00000553693 UBXN7O94888 489 aa4.99□□□□□ -1.61
SCFD1-210ENST00000553693 TJP3O95049 919 aa4.99□□□□□ -1.61
SCFD1-210ENST00000553693 LATS1O95835 1130 aa4.99□□□□□ -1.61
SCFD1-210ENST00000553693 EPHB2P29323 1055 aa4.99□□□□□ -1.61
SCFD1-210ENST00000553693 KRTAP10-6P60371 365 aaPredicted RBP4.99□□□□□ -1.61
SCFD1-210ENST00000553693 GPSM2P81274 684 aa4.99□□□□□ -1.61
SCFD1-210ENST00000553693 KRT17Q04695 432 aa4.99□□□□□ -1.61
SCFD1-210ENST00000553693 MYO1EQ12965 1108 aa4.99□□□□□ -1.61
SCFD1-210ENST00000553693 TBC1D25Q3MII6 688 aa4.99□□□□□ -1.61
SCFD1-210ENST00000553693 MTX3Q5HYI7 312 aa4.99□□□□□ -1.61
SCFD1-210ENST00000553693 EPHA10Q5JZY3 1008 aa4.99□□□□□ -1.61
SCFD1-210ENST00000553693 PRAMEF17Q5VTA0 474 aa4.99□□□□□ -1.61
SCFD1-210ENST00000553693 TRIM72Q6ZMU5 477 aa4.99□□□□□ -1.61
SCFD1-210ENST00000553693 GAS2L3Q86XJ1 694 aa4.99□□□□□ -1.61
SCFD1-210ENST00000553693 DNAJC5GQ8N7S2 189 aa4.99□□□□□ -1.61
SCFD1-210ENST00000553693 OR6B3Q8NGW1 331 aa4.99□□□□□ -1.61
SCFD1-210ENST00000553693 SCARB1Q8WTV0 552 aa4.99□□□□□ -1.61
SCFD1-210ENST00000553693 OSCP1Q8WVF1 389 aa4.99□□□□□ -1.61
SCFD1-210ENST00000553693 XAGE5Q8WWM1 108 aa4.99□□□□□ -1.61
SCFD1-210ENST00000553693 SOCS4Q8WXH5 440 aa4.99□□□□□ -1.61
SCFD1-210ENST00000553693 LRGUKQ96M69 825 aa4.99□□□□□ -1.61
SCFD1-210ENST00000553693 P2RX7Q99572 595 aaKnown RBP4.99□□□□□ -1.61
SCFD1-210ENST00000553693 GABBR1Q9UBS5 961 aa4.99□□□□□ -1.61
SCFD1-210ENST00000553693 A0A087WWL8 130 aa4.98□□□□□ -1.61
SCFD1-210ENST00000553693 PRKCBP05771 671 aa4.98□□□□□ -1.61
SCFD1-210ENST00000553693 PRR35P0CG20 571 aa4.98□□□□□ -1.61
SCFD1-210ENST00000553693 U2AF1L5P0DN76 240 aaPredicted RBP4.98□□□□□ -1.61
SCFD1-210ENST00000553693 KELP23276 732 aa4.98□□□□□ -1.61
SCFD1-210ENST00000553693 ARFIP2P53365 341 aa4.98□□□□□ -1.61
SCFD1-210ENST00000553693 HOXA4Q00056 320 aaPredicted RBP4.98□□□□□ -1.61
SCFD1-210ENST00000553693 U2AF1Q01081 240 aaKnown RBP eCLIP4.98□□□□□ -1.61
SCFD1-210ENST00000553693 SP2Q02086 613 aa4.98□□□□□ -1.61
SCFD1-210ENST00000553693 RAB32Q13637 225 aa4.98□□□□□ -1.61
SCFD1-210ENST00000553693 NAPRTQ6XQN6 538 aa4.98□□□□□ -1.61
SCFD1-210ENST00000553693 Q6ZWC4 215 aa4.98□□□□□ -1.61
SCFD1-210ENST00000553693 NEK8Q86SG6 692 aa4.98□□□□□ -1.61
SCFD1-210ENST00000553693 ABHD11Q8NFV4 315 aa4.98□□□□□ -1.61
SCFD1-210ENST00000553693 SLC35G2Q8TBE7 412 aa4.98□□□□□ -1.61
SCFD1-210ENST00000553693 STAG1Q8WVM7 1258 aa4.98□□□□□ -1.61
SCFD1-210ENST00000553693 DAZAP1Q96EP5 407 aaKnown RBP4.98□□□□□ -1.61
SCFD1-210ENST00000553693 ZNF778Q96MU6 729 aa4.98□□□□□ -1.61
SCFD1-210ENST00000553693 TAAR9Q96RI9 348 aa4.98□□□□□ -1.61
SCFD1-210ENST00000553693 MESP1Q9BRJ9 268 aa4.98□□□□□ -1.61
SCFD1-210ENST00000553693 RTFDC1Q9BY42 306 aaPredicted RBP4.98□□□□□ -1.61
SCFD1-210ENST00000553693 CDH19Q9H159 772 aa4.98□□□□□ -1.61
SCFD1-210ENST00000553693 CXorf36Q9H7Y0 433 aa4.98□□□□□ -1.61
SCFD1-210ENST00000553693 ZSCAN32Q9NX65 697 aa4.98□□□□□ -1.61
SCFD1-210ENST00000553693 TISP43B9A030 160 aa4.97□□□□□ -1.61
SCFD1-210ENST00000553693 H7C1Q1 480 aa4.97□□□□□ -1.61
SCFD1-210ENST00000553693 hCG_1984214I3L0E3 225 aa4.97□□□□□ -1.61
SCFD1-210ENST00000553693 MYO1FO00160 1098 aa4.97□□□□□ -1.61
SCFD1-210ENST00000553693 PHGDHO43175 533 aaKnown RBP4.97□□□□□ -1.61
SCFD1-210ENST00000553693 RFPL1O75677 317 aa4.97□□□□□ -1.61
SCFD1-210ENST00000553693 CSF1RP07333 972 aa4.97□□□□□ -1.61
SCFD1-210ENST00000553693 NPR1P16066 1061 aa4.97□□□□□ -1.61
SCFD1-210ENST00000553693 RAB27AP51159 221 aa4.97□□□□□ -1.61
SCFD1-210ENST00000553693 CYP4F2P78329 520 aa4.97□□□□□ -1.61
SCFD1-210ENST00000553693 ANO6Q4KMQ2 910 aa4.97□□□□□ -1.61
SCFD1-210ENST00000553693 DEPDC1Q5TB30 811 aa4.97□□□□□ -1.61
SCFD1-210ENST00000553693 MORN5Q5VZ52 161 aa4.97□□□□□ -1.61
SCFD1-210ENST00000553693 ZNF66Q6ZN08 573 aa4.97□□□□□ -1.61
SCFD1-210ENST00000553693 SLC15A4Q8N697 577 aa4.97□□□□□ -1.61
SCFD1-210ENST00000553693 ACO2Q99798 780 aaKnown RBP4.97□□□□□ -1.61
SCFD1-210ENST00000553693 GABRQQ9UN88 632 aa4.97□□□□□ -1.61
SCFD1-210ENST00000553693 MRPS17Q9Y2R5 130 aaKnown RBP4.97□□□□□ -1.61
SCFD1-210ENST00000553693 PRRT4C9JH25 899 aa4.96□□□□□ -1.62
SCFD1-210ENST00000553693 BTN3A1O00481 513 aa4.96□□□□□ -1.62
SCFD1-210ENST00000553693 PPP6CO00743 305 aa4.96□□□□□ -1.62
SCFD1-210ENST00000553693 TUBB4AP04350 444 aa4.96□□□□□ -1.62
SCFD1-210ENST00000553693 KCNA3P22001 575 aa4.96□□□□□ -1.62
SCFD1-210ENST00000553693 DGKEP52429 567 aa4.96□□□□□ -1.62
SCFD1-210ENST00000553693 AGFG1P52594 562 aaKnown RBP4.96□□□□□ -1.62
SCFD1-210ENST00000553693 PRKAG1P54619 331 aa4.96□□□□□ -1.62
SCFD1-210ENST00000553693 SSBP2P81877 361 aaPredicted RBP4.96□□□□□ -1.62
SCFD1-210ENST00000553693 CERKLQ49MI3 558 aaPredicted RBP4.96□□□□□ -1.62
SCFD1-210ENST00000553693 ZNF626Q68DY1 528 aa4.96□□□□□ -1.62
SCFD1-210ENST00000553693 B3GNT9Q6UX72 402 aa4.96□□□□□ -1.62
SCFD1-210ENST00000553693 YTHDF3Q7Z739 585 aaKnown RBP4.96□□□□□ -1.62
SCFD1-210ENST00000553693 TPH2Q8IWU9 490 aa4.96□□□□□ -1.62
SCFD1-210ENST00000553693 FAM177A1Q8N128 213 aaPredicted RBP4.96□□□□□ -1.62
SCFD1-210ENST00000553693 ZBTB34Q8NCN2 500 aa4.96□□□□□ -1.62
SCFD1-210ENST00000553693 PPP1R35Q8TAP8 253 aa4.96□□□□□ -1.62
SCFD1-210ENST00000553693 CYP2W1Q8TAV3 490 aa4.96□□□□□ -1.62
SCFD1-210ENST00000553693 DPCDQ9BVM2 203 aaPredicted RBP4.96□□□□□ -1.62
SCFD1-210ENST00000553693 DPH1Q9BZG8 443 aa4.96□□□□□ -1.62
SCFD1-210ENST00000553693 MS4A7Q9GZW8 240 aaPredicted RBP4.96□□□□□ -1.62
SCFD1-210ENST00000553693 ZIM2Q9NZV7 527 aa4.96□□□□□ -1.62
SCFD1-210ENST00000553693 TBC1D4O60343 1298 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms