RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 EPHA5P54756 1037 aa17.12■□□□□ 0.33
ACTN1-209ENST00000553659 TWF1Q12792 350 aa17.12■□□□□ 0.33
ACTN1-209ENST00000553659 RSPO4Q2I0M5 234 aaPredicted RBP17.12■□□□□ 0.33
ACTN1-209ENST00000553659 ARHGAP29Q52LW3 1261 aa17.12■□□□□ 0.33
ACTN1-209ENST00000553659 SEZ6Q53EL9 994 aa17.12■□□□□ 0.33
ACTN1-209ENST00000553659 VITQ6UXI7 678 aa17.12■□□□□ 0.33
ACTN1-209ENST00000553659 CACNA2D4Q7Z3S7 1137 aa17.12■□□□□ 0.33
ACTN1-209ENST00000553659 FMNL3Q8IVF7 1028 aa17.12■□□□□ 0.33
ACTN1-209ENST00000553659 C12orf56Q8IXR9 622 aa17.12■□□□□ 0.33
ACTN1-209ENST00000553659 EHBP1Q8NDI1 1231 aa17.12■□□□□ 0.33
ACTN1-209ENST00000553659 ACCSQ96QU6 501 aa17.12■□□□□ 0.33
ACTN1-209ENST00000553659 FIZ1Q96SL8 496 aa17.12■□□□□ 0.33
ACTN1-209ENST00000553659 STRA6Q9BX79 667 aa17.12■□□□□ 0.33
ACTN1-209ENST00000553659 CHRDQ9H2X0 955 aa17.12■□□□□ 0.33
ACTN1-209ENST00000553659 PLEKHA5Q9HAU0 1116 aa17.12■□□□□ 0.33
ACTN1-209ENST00000553659 NDRG2Q9UN36 371 aaKnown RBP17.12■□□□□ 0.33
ACTN1-209ENST00000553659 FRMD4BQ9Y2L6 1034 aa17.12■□□□□ 0.33
ACTN1-209ENST00000553659 WDR87Q6ZQQ6 2873 aa17.11■□□□□ 0.33
ACTN1-209ENST00000553659 EIF3CLB5ME19 914 aaKnown RBP17.11■□□□□ 0.33
ACTN1-209ENST00000553659 K7ENM7 598 aa17.11■□□□□ 0.33
ACTN1-209ENST00000553659 MYL4P12829 197 aa17.11■□□□□ 0.33
ACTN1-209ENST00000553659 SDHBP21912 280 aa17.11■□□□□ 0.33
ACTN1-209ENST00000553659 GDI1P31150 447 aa17.11■□□□□ 0.33
ACTN1-209ENST00000553659 TRIM65Q6PJ69 517 aa17.11■□□□□ 0.33
ACTN1-209ENST00000553659 ZPBP2Q6X784 338 aa17.11■□□□□ 0.33
ACTN1-209ENST00000553659 SYT10Q6XYQ8 523 aa17.11■□□□□ 0.33
ACTN1-209ENST00000553659 RNF19BQ6ZMZ0 732 aa17.11■□□□□ 0.33
ACTN1-209ENST00000553659 SYCP3Q8IZU3 236 aa17.11■□□□□ 0.33
ACTN1-209ENST00000553659 TMEM161BQ8NDZ6 487 aa17.11■□□□□ 0.33
ACTN1-209ENST00000553659 DEPDC1BQ8WUY9 529 aa17.11■□□□□ 0.33
ACTN1-209ENST00000553659 FAM3CQ92520 227 aa17.11■□□□□ 0.33
ACTN1-209ENST00000553659 EEF2KMTQ96G04 330 aa17.11■□□□□ 0.33
ACTN1-209ENST00000553659 EIF3CQ99613 913 aaKnown RBP17.11■□□□□ 0.33
ACTN1-209ENST00000553659 IER2Q9BTL4 223 aa17.11■□□□□ 0.33
ACTN1-209ENST00000553659 TSGA10Q9BZW7 698 aa17.11■□□□□ 0.33
ACTN1-209ENST00000553659 GPR88Q9GZN0 384 aa17.11■□□□□ 0.33
ACTN1-209ENST00000553659 HAUS4Q9H6D7 363 aa17.11■□□□□ 0.33
ACTN1-209ENST00000553659 L2HGDHQ9H9P8 463 aa17.11■□□□□ 0.33
ACTN1-209ENST00000553659 TRPV4Q9HBA0 871 aa17.11■□□□□ 0.33
ACTN1-209ENST00000553659 PLCB1Q9NQ66 1216 aa17.11■□□□□ 0.33
ACTN1-209ENST00000553659 ASAH2Q9NR71 780 aa17.11■□□□□ 0.33
ACTN1-209ENST00000553659 ANKFY1Q9P2R3 1169 aa17.11■□□□□ 0.33
ACTN1-209ENST00000553659 MYO6Q9UM54 1294 aa17.11■□□□□ 0.33
ACTN1-209ENST00000553659 SMG5Q9UPR3 1016 aaKnown RBP17.11■□□□□ 0.33
ACTN1-209ENST00000553659 CEP250Q9BV73 2442 aa17.11■□□□□ 0.33
ACTN1-209ENST00000553659 RALGAPA1Q6GYQ0 2036 aa17.11■□□□□ 0.33
ACTN1-209ENST00000553659 GPR179Q6PRD1 2367 aa17.1■□□□□ 0.33
ACTN1-209ENST00000553659 M0QZQ0 153 aa17.1■□□□□ 0.33
ACTN1-209ENST00000553659 MAPK13O15264 365 aa17.1■□□□□ 0.33
ACTN1-209ENST00000553659 CLDN3O15551 220 aa17.1■□□□□ 0.33
ACTN1-209ENST00000553659 TGFB1I1O43294 461 aa17.1■□□□□ 0.33
ACTN1-209ENST00000553659 CTIFO43310 598 aaKnown RBP17.1■□□□□ 0.33
ACTN1-209ENST00000553659 OAZ2O95190 189 aa17.1■□□□□ 0.33
ACTN1-209ENST00000553659 CPB1P15086 417 aa17.1■□□□□ 0.33
ACTN1-209ENST00000553659 NMT1P30419 496 aaKnown RBP17.1■□□□□ 0.33
ACTN1-209ENST00000553659 LRPAP1P30533 357 aa17.1■□□□□ 0.33
ACTN1-209ENST00000553659 CASQ1P31415 396 aa17.1■□□□□ 0.33
ACTN1-209ENST00000553659 HOXD13P35453 343 aa17.1■□□□□ 0.33
ACTN1-209ENST00000553659 VIPR2P41587 438 aa17.1■□□□□ 0.33
ACTN1-209ENST00000553659 GNG11P61952 73 aa17.1■□□□□ 0.33
ACTN1-209ENST00000553659 YWHAHQ04917 246 aaPredicted RBP17.1■□□□□ 0.33
ACTN1-209ENST00000553659 MCL1Q07820 350 aa17.1■□□□□ 0.33
ACTN1-209ENST00000553659 KCNH2Q12809 1159 aa17.1■□□□□ 0.33
ACTN1-209ENST00000553659 MFSD6LQ8IWD5 586 aa17.1■□□□□ 0.33
ACTN1-209ENST00000553659 BEST2Q8NFU1 509 aa17.1■□□□□ 0.33
ACTN1-209ENST00000553659 ZSCAN18Q8TBC5 510 aaPredicted RBP17.1■□□□□ 0.33
ACTN1-209ENST00000553659 OXCT2Q9BYC2 517 aaPredicted RBP17.1■□□□□ 0.33
ACTN1-209ENST00000553659 LMAN1LQ9HAT1 526 aa17.1■□□□□ 0.33
ACTN1-209ENST00000553659 DMAC2Q9NW81 257 aa17.1■□□□□ 0.33
ACTN1-209ENST00000553659 TUBGCP4Q9UGJ1 667 aa17.1■□□□□ 0.33
ACTN1-209ENST00000553659 DNAI1Q9UI46 699 aa17.1■□□□□ 0.33
ACTN1-209ENST00000553659 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.1■□□□□ 0.33
ACTN1-209ENST00000553659 SSU72P8A0A1W2PR75 194 aa17.09■□□□□ 0.33
ACTN1-209ENST00000553659 RNF225M0QZC1 329 aaPredicted RBP17.09■□□□□ 0.33
ACTN1-209ENST00000553659 ZNF263O14978 683 aa17.09■□□□□ 0.33
ACTN1-209ENST00000553659 CLTAP09496 248 aa17.09■□□□□ 0.33
ACTN1-209ENST00000553659 CXCL8P10145 99 aa17.09■□□□□ 0.33
ACTN1-209ENST00000553659 GJA1P17302 382 aa17.09■□□□□ 0.33
ACTN1-209ENST00000553659 NRLP54845 237 aa17.09■□□□□ 0.33
ACTN1-209ENST00000553659 NCKAP1LP55160 1127 aa17.09■□□□□ 0.33
ACTN1-209ENST00000553659 MLLT6P55198 1093 aaPredicted RBP17.09■□□□□ 0.33
ACTN1-209ENST00000553659 GTF2BQ00403 316 aa17.09■□□□□ 0.33
ACTN1-209ENST00000553659 PPP2R5DQ14738 602 aa17.09■□□□□ 0.33
ACTN1-209ENST00000553659 MTF1Q14872 753 aa17.09■□□□□ 0.33
ACTN1-209ENST00000553659 TEAD2Q15562 447 aa17.09■□□□□ 0.33
ACTN1-209ENST00000553659 ZBTB6Q15916 424 aa17.09■□□□□ 0.33
ACTN1-209ENST00000553659 FAM186BQ8IYM0 893 aa17.09■□□□□ 0.33
ACTN1-209ENST00000553659 E2F7Q96AV8 911 aa17.09■□□□□ 0.33
ACTN1-209ENST00000553659 CCDC42Q96M95 316 aa17.09■□□□□ 0.33
ACTN1-209ENST00000553659 DESI2Q9BSY9 194 aa17.09■□□□□ 0.33
ACTN1-209ENST00000553659 LUC7LQ9NQ29 371 aaKnown RBP17.09■□□□□ 0.33
ACTN1-209ENST00000553659 AGPAT3Q9NRZ7 376 aa17.09■□□□□ 0.33
ACTN1-209ENST00000553659 FAM207AQ9NSI2 230 aaPredicted RBP17.09■□□□□ 0.33
ACTN1-209ENST00000553659 PIAS3Q9Y6X2 628 aa17.09■□□□□ 0.33
ACTN1-209ENST00000553659 NUP210Q8TEM1 1887 aaPredicted RBP17.08■□□□□ 0.33
ACTN1-209ENST00000553659 PRR5-ARHGAP8B1AHC4 643 aa17.08■□□□□ 0.32
ACTN1-209ENST00000553659 AKAP3O75969 853 aa17.08■□□□□ 0.32
ACTN1-209ENST00000553659 SLU7O95391 586 aaKnown RBP17.08■□□□□ 0.32
ACTN1-209ENST00000553659 TDGF1P13385 188 aa17.08■□□□□ 0.32
ACTN1-209ENST00000553659 CYP3A5P20815 502 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms