RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 PSMD12O00232 456 aaPredicted RBP9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 PSTPIP1O43586 416 aa9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 PLATP00750 562 aa9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 DCAF6Q58WW2 860 aa9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 C6orf52Q5T4I8 152 aa9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 RAPH1Q70E73 1250 aa9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 RASGRP4Q8TDF6 673 aa9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 SCFD2Q8WU76 684 aa9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 CEP95Q96GE4 821 aa9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 SERPINI1Q99574 410 aa9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 TMEM246Q9BRR3 403 aa9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 MTG1Q9BT17 334 aaPredicted RBP9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 MCCC2Q9HCC0 563 aa9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 DBF4Q9UBU7 674 aaPredicted RBP9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 HAT1O14929 419 aa9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 SERPINB7O75635 380 aa9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 DNAJB5O75953 348 aa9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 ALOX5P09917 674 aa9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 CAMK2BQ13554 666 aa9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 WDR44Q5JSH3 913 aa9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 FOXB2Q5VYV0 432 aa9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 GRPEL2Q8TAA5 225 aa9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 PUS7LQ9H0K6 701 aaKnown RBP9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 RNF14Q9UBS8 474 aa9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 MYRFQ9Y2G1 1151 aa9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 TPST1O60507 370 aa9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 ABCB1P08183 1280 aaPredicted RBP9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 DLATP10515 647 aaKnown RBP9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 PPP1R3AQ16821 1122 aa9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 SWI5Q1ZZU3 235 aa9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 TBC1D9BQ66K14 1250 aa9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 PCGF5Q86SE9 256 aa9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 SSH3Q8TE77 659 aa9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 CA5BP1Q8WTZ4 195 aa9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 C1orf54Q8WWF1 131 aa9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 OSBPL8Q9BZF1 889 aa9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 ISCUQ9H1K1 167 aa9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 FANCEQ9HB96 536 aa9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 C20orf96Q9NUD7 363 aaPredicted RBP9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 H0Y626 953 aa9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 FOSP01100 380 aaPredicted RBP9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 POU2F1P14859 743 aa9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 ZNF362Q5T0B9 420 aaPredicted RBP9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 UNC5DQ6UXZ4 953 aa9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 METTL16Q86W50 562 aaKnown RBP9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 CIB1Q99828 191 aa9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 RNF41Q9H4P4 317 aaPredicted RBP9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 ARHGEF3Q9NR81 526 aa9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 MPP6Q9NZW5 540 aa9.34□□□□□ -0.91
GTF2A1-203ENST00000553612 MT-ND3P03897 115 aa9.34□□□□□ -0.92
GTF2A1-203ENST00000553612 IDUAP35475 653 aa9.34□□□□□ -0.92
GTF2A1-203ENST00000553612 EML3Q32P44 896 aa9.34□□□□□ -0.92
GTF2A1-203ENST00000553612 DNAL1Q4LDG9 190 aa9.34□□□□□ -0.92
GTF2A1-203ENST00000553612 RESP18Q5W5W9 173 aa9.34□□□□□ -0.92
GTF2A1-203ENST00000553612 LEMD2Q8NC56 503 aa9.34□□□□□ -0.92
GTF2A1-203ENST00000553612 GRK7Q8WTQ7 553 aa9.34□□□□□ -0.92
GTF2A1-203ENST00000553612 GLG1Q92896 1179 aa9.34□□□□□ -0.92
GTF2A1-203ENST00000553612 SCYL1Q96KG9 808 aa9.34□□□□□ -0.92
GTF2A1-203ENST00000553612 TAF6LQ9Y6J9 622 aa9.34□□□□□ -0.92
GTF2A1-203ENST00000553612 SGK1O00141 431 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 DDX3XO00571 662 aaKnown RBP eCLIP9.33□□□□□ -0.924e-8■■■■□ 24.9
GTF2A1-203ENST00000553612 ANGPT2O15123 496 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 CYP21A2P08686 494 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 CDC27P30260 824 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 ATXN1P54253 815 aaKnown RBP9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 MEI1Q5TIA1 1274 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 MMAAQ8IVH4 418 aaKnown RBP9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 SHCBP1Q8NEM2 672 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 SLC9A6Q92581 669 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 C9orf72Q96LT7 481 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 DCAF16Q9NXF7 216 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 CHKBQ9Y259 395 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 CSADQ9Y600 493 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 ADCY9O60503 1353 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 NSD2O96028 1365 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 ASTN2O75129 1339 aaPredicted RBP9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 NEMP1O14524 444 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 GNGT2O14610 69 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 FANCGO15287 622 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 PSKH1P11801 424 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 PRLRP16471 622 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 UQCRC1P31930 480 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 NAPAP54920 295 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 GABPAQ06546 454 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 PTGDRQ13258 359 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 SSX2Q16385 188 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 ETFRF1Q6IPR1 90 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 TNFRSF25Q93038 417 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 CGREF1Q99674 301 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 ZBTB3Q9H5J0 574 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 CAPN6Q9Y6Q1 641 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 E5RI56 91 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 AURKAO14965 403 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 AKAP10O43572 662 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 GTPBP6O43824 516 aaPredicted RBP9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 TBX10O75333 385 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 INHBAP08476 426 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 PRG2P13727 222 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 TECP42680 631 aa9.33□□□□□ -0.92
GTF2A1-203ENST00000553612 ATN1P54259 1190 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms