RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 L1RE1Q9UN81 338 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 GPR55Q9Y2T6 319 aaPredicted RBP4.24□□□□□ -1.73
RDH11-204ENST00000553578 PPP2R3BQ9Y5P8 575 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 ZNF536O15090 1300 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 MYPNQ86TC9 1320 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 DOCK1Q14185 1865 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 E7EVH7 732 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 TSPAN1O60635 241 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 CD9P21926 228 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 TKTP29401 623 aaKnown RBP4.24□□□□□ -1.73
RDH11-204ENST00000553578 GCH1P30793 250 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 PIP4K2AP48426 406 aaPredicted RBP4.24□□□□□ -1.73
RDH11-204ENST00000553578 MSLNQ13421 630 aaPredicted RBP4.24□□□□□ -1.73
RDH11-204ENST00000553578 DRP2Q13474 957 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 C15orf59Q2T9L4 293 aaPredicted RBP4.24□□□□□ -1.73
RDH11-204ENST00000553578 SLC10A6Q3KNW5 377 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 ISLR2Q6UXK2 745 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 ZNF804AQ7Z570 1209 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 FAM35AQ86V20 835 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 PLA2G4DQ86XP0 818 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 KSR1Q8IVT5 923 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 FAM20CQ8IXL6 584 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 FMR1NBQ8N0W7 255 aaPredicted RBP4.24□□□□□ -1.73
RDH11-204ENST00000553578 NUP93Q8N1F7 819 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 LILRB1Q8NHL6 650 aaPredicted RBP4.24□□□□□ -1.73
RDH11-204ENST00000553578 HDAC2Q92769 488 aaKnown RBP4.24□□□□□ -1.73
RDH11-204ENST00000553578 CEP95Q96GE4 821 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 HHIPQ96QV1 700 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 MPHOSPH8Q99549 860 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 HNRNPABQ99729 332 aaKnown RBP4.24□□□□□ -1.73
RDH11-204ENST00000553578 NAA15Q9BXJ9 866 aaKnown RBP4.24□□□□□ -1.73
RDH11-204ENST00000553578 QRSL1Q9H0R6 528 aaKnown RBP4.24□□□□□ -1.73
RDH11-204ENST00000553578 MS4A5Q9H3V2 200 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 PARVGQ9HBI0 331 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 DDX19AQ9NUU7 478 aaKnown RBP4.24□□□□□ -1.73
RDH11-204ENST00000553578 RMND1Q9NWS8 449 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 PCDHGB4Q9UN71 923 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 LTBP3Q9NS15 1303 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 COL4A5P29400 1685 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 SSU72P8A0A1W2PR75 194 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 ESYT2A0FGR8 921 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 SMIM23A6NLE4 172 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 NOTOA8MTQ0 251 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 SHISA8B8ZZ34 492 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 F8W031 263 aaPredicted RBP4.24□□□□□ -1.73
RDH11-204ENST00000553578 KLF4O43474 513 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 RGS9O75916 674 aaPredicted RBP4.24□□□□□ -1.73
RDH11-204ENST00000553578 FBXO21O94952 628 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 STT3AP46977 705 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 CCZ1BP86790 482 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 CCZ1P86791 482 aaPredicted RBP4.24□□□□□ -1.73
RDH11-204ENST00000553578 ADAM9Q13443 819 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 E4F1Q66K89 784 aaPredicted RBP4.24□□□□□ -1.73
RDH11-204ENST00000553578 HHIPL2Q6UWX4 724 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 RRAGAQ7L523 313 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 FGD2Q7Z6J4 655 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 TBC1D1Q86TI0 1168 aaPredicted RBP4.24□□□□□ -1.73
RDH11-204ENST00000553578 LINC00301Q8NCQ3 95 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 ATXN2LQ8WWM7 1075 aaKnown RBP4.24□□□□□ -1.73
RDH11-204ENST00000553578 SHISA4Q96DD7 197 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 PAWRQ96IZ0 340 aaKnown RBP4.24□□□□□ -1.73
RDH11-204ENST00000553578 MAML3Q96JK9 1138 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 PGBD1Q96JS3 809 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 CATSPER2Q96P56 530 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 CAMKK2Q96RR4 588 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 PHF20Q9BVI0 1012 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 MTMR12Q9C0I1 747 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 SNX25Q9H3E2 840 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 EBF2Q9HAK2 575 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 PLEKHA5Q9HAU0 1116 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 RIC8AQ9NPQ8 531 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 HPS4Q9NQG7 708 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 SEC31BQ9NQW1 1179 aa4.24□□□□□ -1.73
RDH11-204ENST00000553578 SBF1O95248 1867 aa4.23□□□□□ -1.73
RDH11-204ENST00000553578 GTPBP10A4D1E9 387 aaKnown RBP4.23□□□□□ -1.73
RDH11-204ENST00000553578 AKR1B15C9JRZ8 316 aaPredicted RBP4.23□□□□□ -1.73
RDH11-204ENST00000553578 WDR46O15213 610 aaKnown RBP4.23□□□□□ -1.73
RDH11-204ENST00000553578 SUSD5O60279 629 aa4.23□□□□□ -1.73
RDH11-204ENST00000553578 PLA2G6O60733 806 aa4.23□□□□□ -1.73
RDH11-204ENST00000553578 LILRB5O75023 590 aa4.23□□□□□ -1.73
RDH11-204ENST00000553578 PAGE1O75459 146 aa4.23□□□□□ -1.73
RDH11-204ENST00000553578 PDE5AO76074 875 aa4.23□□□□□ -1.73
RDH11-204ENST00000553578 KITP10721 976 aa4.23□□□□□ -1.73
RDH11-204ENST00000553578 IDO1P14902 403 aa4.23□□□□□ -1.73
RDH11-204ENST00000553578 CPB1P15086 417 aa4.23□□□□□ -1.73
RDH11-204ENST00000553578 HADHAP40939 763 aa4.23□□□□□ -1.73
RDH11-204ENST00000553578 ADARP55265 1226 aaKnown RBP4.23□□□□□ -1.73
RDH11-204ENST00000553578 GPSM2P81274 684 aa4.23□□□□□ -1.73
RDH11-204ENST00000553578 CETN1Q12798 172 aa4.23□□□□□ -1.73
RDH11-204ENST00000553578 ZNF174Q15697 407 aa4.23□□□□□ -1.73
RDH11-204ENST00000553578 PRSS53Q2L4Q9 553 aa4.23□□□□□ -1.73
RDH11-204ENST00000553578 PABPC1LQ4VXU2 614 aaKnown RBP4.23□□□□□ -1.73
RDH11-204ENST00000553578 TRAPPC3LQ5T215 181 aa4.23□□□□□ -1.73
RDH11-204ENST00000553578 C12orf60Q5U649 245 aa4.23□□□□□ -1.73
RDH11-204ENST00000553578 TWF2Q6IBS0 349 aaKnown RBP4.23□□□□□ -1.73
RDH11-204ENST00000553578 ERAP2Q6P179 960 aa4.23□□□□□ -1.73
RDH11-204ENST00000553578 EXOC3L1Q86VI1 746 aa4.23□□□□□ -1.73
RDH11-204ENST00000553578 MAP4K3Q8IVH8 894 aa4.23□□□□□ -1.73
RDH11-204ENST00000553578 CCDC117Q8IWD4 279 aaPredicted RBP4.23□□□□□ -1.73
RDH11-204ENST00000553578 DQX1Q8TE96 717 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms