RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 TTC39CQ8N584 583 aa24.24■■□□□ 1.47
TDP1-206ENST00000553569 RSAD2Q8WXG1 361 aa24.24■■□□□ 1.47
TDP1-206ENST00000553569 KAT5Q92993 513 aa24.24■■□□□ 1.47
TDP1-206ENST00000553569 GCNAQ96QF7 691 aa24.24■■□□□ 1.47
TDP1-206ENST00000553569 TUBGCP2Q9BSJ2 902 aa24.24■■□□□ 1.47
TDP1-206ENST00000553569 DNAI2Q9GZS0 605 aa24.24■■□□□ 1.47
TDP1-206ENST00000553569 ATXN3LQ9H3M9 355 aa24.24■■□□□ 1.47
TDP1-206ENST00000553569 SLITRK6Q9H5Y7 841 aa24.24■■□□□ 1.47
TDP1-206ENST00000553569 GREB1Q4ZG55 1949 aa24.23■■□□□ 1.47
TDP1-206ENST00000553569 PES1O00541 588 aaKnown RBP24.23■■□□□ 1.47
TDP1-206ENST00000553569 AP1G2O75843 785 aa24.23■■□□□ 1.47
TDP1-206ENST00000553569 NOL4O94818 638 aa24.23■■□□□ 1.47
TDP1-206ENST00000553569 MICAL2O94851 1124 aa24.23■■□□□ 1.47
TDP1-206ENST00000553569 FGF19O95750 216 aa24.23■■□□□ 1.47
TDP1-206ENST00000553569 CYP4F8P98187 520 aa24.23■■□□□ 1.47
TDP1-206ENST00000553569 MYL5Q02045 173 aa24.23■■□□□ 1.47
TDP1-206ENST00000553569 POTEHQ6S545 545 aa24.23■■□□□ 1.47
TDP1-206ENST00000553569 PAQR9Q6ZVX9 377 aa24.23■■□□□ 1.47
TDP1-206ENST00000553569 RRAGAQ7L523 313 aa24.23■■□□□ 1.47
TDP1-206ENST00000553569 SMARCD1Q96GM5 515 aa24.23■■□□□ 1.47
TDP1-206ENST00000553569 C8orf48Q96LL4 319 aa24.23■■□□□ 1.47
TDP1-206ENST00000553569 KCNK12Q9HB15 430 aa24.23■■□□□ 1.47
TDP1-206ENST00000553569 IL21Q9HBE4 155 aa24.23■■□□□ 1.47
TDP1-206ENST00000553569 GDE1Q9NZC3 331 aa24.23■■□□□ 1.47
TDP1-206ENST00000553569 OBSL1O75147 1896 aa24.23■■□□□ 1.47
TDP1-206ENST00000553569 SYCE3A1L190 88 aa24.22■■□□□ 1.47
TDP1-206ENST00000553569 CDC25CP30307 473 aa24.22■■□□□ 1.47
TDP1-206ENST00000553569 RAD23BP54727 409 aa24.22■■□□□ 1.47
TDP1-206ENST00000553569 HTR4Q13639 388 aa24.22■■□□□ 1.47
TDP1-206ENST00000553569 VWA3BQ502W6 1294 aa24.22■■□□□ 1.47
TDP1-206ENST00000553569 TCP11X2Q5H9J9 407 aa24.22■■□□□ 1.47
TDP1-206ENST00000553569 STXBP5Q5T5C0 1151 aa24.22■■□□□ 1.47
TDP1-206ENST00000553569 PARM1Q6UWI2 310 aa24.22■■□□□ 1.47
TDP1-206ENST00000553569 GBP6Q6ZN66 633 aa24.22■■□□□ 1.47
TDP1-206ENST00000553569 SLC4A11Q8NBS3 891 aa24.22■■□□□ 1.47
TDP1-206ENST00000553569 TMEM176AQ96HP8 235 aa24.22■■□□□ 1.47
TDP1-206ENST00000553569 SPATA17Q96L03 361 aa24.22■■□□□ 1.47
TDP1-206ENST00000553569 HEXIM2Q96MH2 286 aaKnown RBP24.22■■□□□ 1.47
TDP1-206ENST00000553569 SMOC2Q9H3U7 446 aa24.22■■□□□ 1.47
TDP1-206ENST00000553569 EPHX3Q9H6B9 360 aa24.22■■□□□ 1.47
TDP1-206ENST00000553569 FANCLQ9NW38 375 aa24.22■■□□□ 1.47
TDP1-206ENST00000553569 TAB2Q9NYJ8 693 aa24.22■■□□□ 1.47
TDP1-206ENST00000553569 IGSF9Q9P2J2 1179 aa24.22■■□□□ 1.47
TDP1-206ENST00000553569 SORCS3Q9UPU3 1222 aa24.22■■□□□ 1.47
TDP1-206ENST00000553569 NUMBLQ9Y6R0 609 aa24.22■■□□□ 1.47
TDP1-206ENST00000553569 CUL9Q8IWT3 2517 aa24.21■■□□□ 1.47
TDP1-206ENST00000553569 ALADP13716 330 aa24.21■■□□□ 1.47
TDP1-206ENST00000553569 EEF1GP26641 437 aaKnown RBP24.21■■□□□ 1.47
TDP1-206ENST00000553569 ARHGAP15Q53QZ3 475 aa24.21■■□□□ 1.47
TDP1-206ENST00000553569 MIIPQ5JXC2 388 aa24.21■■□□□ 1.47
TDP1-206ENST00000553569 CDKAL1Q5VV42 579 aa24.21■■□□□ 1.47
TDP1-206ENST00000553569 MTSS1LQ765P7 747 aa24.21■■□□□ 1.47
TDP1-206ENST00000553569 AOPEPQ8N6M6 819 aa24.21■■□□□ 1.47
TDP1-206ENST00000553569 UBR7Q8N806 425 aa24.21■■□□□ 1.47
TDP1-206ENST00000553569 CYFIP2Q96F07 1278 aa24.21■■□□□ 1.47
TDP1-206ENST00000553569 ZSWIM3Q96MP5 696 aa24.21■■□□□ 1.47
TDP1-206ENST00000553569 NDST4Q9H3R1 872 aa24.21■■□□□ 1.47
TDP1-206ENST00000553569 FAM124BQ9H5Z6 455 aaPredicted RBP24.21■■□□□ 1.47
TDP1-206ENST00000553569 DMAP1Q9NPF5 467 aaPredicted RBP24.21■■□□□ 1.47
TDP1-206ENST00000553569 UXTQ9UBK9 157 aaPredicted RBP24.21■■□□□ 1.47
TDP1-206ENST00000553569 PCDHB4Q9Y5E5 795 aa24.21■■□□□ 1.47
TDP1-206ENST00000553569 DENND4CQ5VZ89 1909 aa24.2■■□□□ 1.46
TDP1-206ENST00000553569 ANHXE9PGG2 379 aa24.2■■□□□ 1.46
TDP1-206ENST00000553569 PI4K2BG5E9Z4 385 aa24.2■■□□□ 1.46
TDP1-206ENST00000553569 LETM1O95202 739 aaPredicted RBP24.2■■□□□ 1.46
TDP1-206ENST00000553569 FAM200BP0CF97 657 aa24.2■■□□□ 1.46
TDP1-206ENST00000553569 SLC9A1P19634 815 aa24.2■■□□□ 1.46
TDP1-206ENST00000553569 IFRD2Q12894 506 aaPredicted RBP24.2■■□□□ 1.46
TDP1-206ENST00000553569 EXOC3L4Q17RC7 722 aa24.2■■□□□ 1.46
TDP1-206ENST00000553569 GPR158Q5T848 1215 aa24.2■■□□□ 1.46
TDP1-206ENST00000553569 PHLDB3Q6NSJ2 640 aa24.2■■□□□ 1.46
TDP1-206ENST00000553569 TRIM65Q6PJ69 517 aa24.2■■□□□ 1.46
TDP1-206ENST00000553569 DENND5BQ6ZUT9 1274 aa24.2■■□□□ 1.46
TDP1-206ENST00000553569 FGF14Q92915 247 aa24.2■■□□□ 1.46
TDP1-206ENST00000553569 TRMT2BQ96GJ1 504 aaKnown RBP24.2■■□□□ 1.46
TDP1-206ENST00000553569 KCNK16Q96T55 309 aa24.2■■□□□ 1.46
TDP1-206ENST00000553569 KXD1Q9BQD3 176 aa24.2■■□□□ 1.46
TDP1-206ENST00000553569 NAT10Q9H0A0 1025 aaKnown RBP24.2■■□□□ 1.46
TDP1-206ENST00000553569 MAP3K7CLP57077 242 aa24.19■■□□□ 1.46
TDP1-206ENST00000553569 USP46P62068 366 aa24.19■■□□□ 1.46
TDP1-206ENST00000553569 APBA1Q02410 837 aa24.19■■□□□ 1.46
TDP1-206ENST00000553569 GCNT1Q02742 428 aa24.19■■□□□ 1.46
TDP1-206ENST00000553569 FAM78AQ5JUQ0 283 aa24.19■■□□□ 1.46
TDP1-206ENST00000553569 PPP1R26Q5T8A7 1209 aaPredicted RBP24.19■■□□□ 1.46
TDP1-206ENST00000553569 TMEM270Q6UE05 265 aa24.19■■□□□ 1.46
TDP1-206ENST00000553569 JAKMIP2Q96AA8 810 aa24.19■■□□□ 1.46
TDP1-206ENST00000553569 CEP295NLQ96MC4 621 aa24.19■■□□□ 1.46
TDP1-206ENST00000553569 KREMEN1Q96MU8 473 aa24.19■■□□□ 1.46
TDP1-206ENST00000553569 HNRNPABQ99729 332 aaKnown RBP24.19■■□□□ 1.46
TDP1-206ENST00000553569 SMOQ99835 787 aa24.19■■□□□ 1.46
TDP1-206ENST00000553569 RPP25Q9BUL9 199 aaKnown RBP24.19■■□□□ 1.46
TDP1-206ENST00000553569 BDP1A6H8Y1 2624 aa24.19■■□□□ 1.46
TDP1-206ENST00000553569 ZNF638Q14966 1978 aaKnown RBP24.18■■□□□ 1.46
TDP1-206ENST00000553569 GTPBP10A4D1E9 387 aaKnown RBP24.18■■□□□ 1.46
TDP1-206ENST00000553569 TADA3O75528 432 aa24.18■■□□□ 1.46
TDP1-206ENST00000553569 BEST1O76090 585 aa24.18■■□□□ 1.46
TDP1-206ENST00000553569 F11P03951 625 aa24.18■■□□□ 1.46
TDP1-206ENST00000553569 CD19P15391 556 aa24.18■■□□□ 1.46
TDP1-206ENST00000553569 ACO1P21399 889 aaKnown RBP24.18■■□□□ 1.46
TDP1-206ENST00000553569 ZXDAP98168 799 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms