RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 SRRM3A6NNA2 597 aaPredicted RBP9.75□□□□□ -0.85
SYNE2-209ENST00000553308 IL18RAPO95256 599 aa9.75□□□□□ -0.85
SYNE2-209ENST00000553308 NFATC1O95644 943 aa9.75□□□□□ -0.85
SYNE2-209ENST00000553308 ITGB3P05106 788 aa9.75□□□□□ -0.85
SYNE2-209ENST00000553308 ADSSP30520 456 aa9.75□□□□□ -0.85
SYNE2-209ENST00000553308 PNPLA4P41247 253 aa9.75□□□□□ -0.85
SYNE2-209ENST00000553308 ZXDBP98169 803 aa9.75□□□□□ -0.85
SYNE2-209ENST00000553308 TFAMQ00059 246 aaKnown RBP9.75□□□□□ -0.85
SYNE2-209ENST00000553308 GRIN1Q05586 938 aa9.75□□□□□ -0.85
SYNE2-209ENST00000553308 MESP2Q0VG99 397 aa9.75□□□□□ -0.85
SYNE2-209ENST00000553308 NR1H3Q13133 447 aa9.75□□□□□ -0.85
SYNE2-209ENST00000553308 KCNB1Q14721 858 aa9.75□□□□□ -0.85
SYNE2-209ENST00000553308 CRY1Q16526 586 aa9.75□□□□□ -0.85
SYNE2-209ENST00000553308 TRIM61Q5EBN2 209 aa9.75□□□□□ -0.85
SYNE2-209ENST00000553308 TMEM92Q6UXU6 159 aa9.75□□□□□ -0.85
SYNE2-209ENST00000553308 ARMCX6Q7L4S7 300 aa9.75□□□□□ -0.85
SYNE2-209ENST00000553308 C11orf74Q86VG3 221 aa9.75□□□□□ -0.85
SYNE2-209ENST00000553308 SFR1Q86XK3 245 aa9.75□□□□□ -0.85
SYNE2-209ENST00000553308 SPATA2LQ8IUW3 424 aaPredicted RBP9.75□□□□□ -0.85
SYNE2-209ENST00000553308 SCN4BQ8IWT1 228 aa9.75□□□□□ -0.85
SYNE2-209ENST00000553308 FRMD1Q8N878 549 aa9.75□□□□□ -0.85
SYNE2-209ENST00000553308 C1orf127Q8N9H9 656 aa9.75□□□□□ -0.85
SYNE2-209ENST00000553308 ZSWIM2Q8NEG5 633 aa9.75□□□□□ -0.85
SYNE2-209ENST00000553308 RLN3Q8WXF3 142 aa9.75□□□□□ -0.85
SYNE2-209ENST00000553308 ZCCHC14Q8WYQ9 949 aaKnown RBP9.75□□□□□ -0.85
SYNE2-209ENST00000553308 POMGNT1Q8WZA1 660 aa9.75□□□□□ -0.85
SYNE2-209ENST00000553308 CALML4Q96GE6 196 aa9.75□□□□□ -0.85
SYNE2-209ENST00000553308 AK8Q96MA6 479 aa9.75□□□□□ -0.85
SYNE2-209ENST00000553308 KIF2CQ99661 725 aa9.75□□□□□ -0.85
SYNE2-209ENST00000553308 ACBD6Q9BR61 282 aa9.75□□□□□ -0.85
SYNE2-209ENST00000553308 CIZ1Q9ULV3 898 aaPredicted RBP9.75□□□□□ -0.85
SYNE2-209ENST00000553308 ARHGAP26Q9UNA1 814 aa9.75□□□□□ -0.85
SYNE2-209ENST00000553308 AGAP1Q9UPQ3 857 aa9.75□□□□□ -0.85
SYNE2-209ENST00000553308 ATXN2Q99700 1313 aaKnown RBP9.75□□□□□ -0.85
SYNE2-209ENST00000553308 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.74□□□□□ -0.85
SYNE2-209ENST00000553308 SCAMP3O14828 347 aaKnown RBP9.74□□□□□ -0.85
SYNE2-209ENST00000553308 SLC26A4O43511 780 aa9.74□□□□□ -0.85
SYNE2-209ENST00000553308 HYAL3O43820 417 aaPredicted RBP9.74□□□□□ -0.85
SYNE2-209ENST00000553308 HUS1O60921 280 aa9.74□□□□□ -0.85
SYNE2-209ENST00000553308 PPP1R37O75864 691 aa9.74□□□□□ -0.85
SYNE2-209ENST00000553308 CYP17A1P05093 508 aa9.74□□□□□ -0.85
SYNE2-209ENST00000553308 CHRM1P11229 460 aaPredicted RBP9.74□□□□□ -0.85
SYNE2-209ENST00000553308 TCF3P15923 654 aa9.74□□□□□ -0.85
SYNE2-209ENST00000553308 HDCP19113 662 aa9.74□□□□□ -0.85
SYNE2-209ENST00000553308 ABCD1P33897 745 aa9.74□□□□□ -0.85
SYNE2-209ENST00000553308 UBA7P41226 1012 aa9.74□□□□□ -0.85
SYNE2-209ENST00000553308 PTGER3P43115 390 aa9.74□□□□□ -0.85
SYNE2-209ENST00000553308 MAPK8P45983 427 aa9.74□□□□□ -0.85
SYNE2-209ENST00000553308 MYL7Q01449 175 aa9.74□□□□□ -0.85
SYNE2-209ENST00000553308 POU5F1Q01860 360 aaKnown RBP9.74□□□□□ -0.85
SYNE2-209ENST00000553308 KCNA1Q09470 495 aa9.74□□□□□ -0.85
SYNE2-209ENST00000553308 CFAP221Q4G0U5 840 aa9.74□□□□□ -0.85
SYNE2-209ENST00000553308 NT5DC4Q86YG4 428 aa9.74□□□□□ -0.85
SYNE2-209ENST00000553308 BRSK2Q8IWQ3 736 aa9.74□□□□□ -0.85
SYNE2-209ENST00000553308 TMEFF1Q8IYR6 380 aa9.74□□□□□ -0.85
SYNE2-209ENST00000553308 ADGRF2Q8IZF7 708 aa9.74□□□□□ -0.85
SYNE2-209ENST00000553308 TMEM86AQ8N2M4 240 aa9.74□□□□□ -0.85
SYNE2-209ENST00000553308 ALLCQ8N6M5 410 aa9.74□□□□□ -0.85
SYNE2-209ENST00000553308 FSIP1Q8NA03 581 aa9.74□□□□□ -0.85
SYNE2-209ENST00000553308 RASSF8Q8NHQ8 419 aa9.74□□□□□ -0.85
SYNE2-209ENST00000553308 CCDC26Q8TAB7 109 aa9.74□□□□□ -0.85
SYNE2-209ENST00000553308 OLIG1Q8TAK6 271 aa9.74□□□□□ -0.85
SYNE2-209ENST00000553308 CXorf38Q8TB03 319 aa9.74□□□□□ -0.85
SYNE2-209ENST00000553308 LARP4BQ92615 738 aaKnown RBP9.74□□□□□ -0.85
SYNE2-209ENST00000553308 SAAL1Q96ER3 474 aa9.74□□□□□ -0.85
SYNE2-209ENST00000553308 FNBP1Q96RU3 617 aa9.74□□□□□ -0.85
SYNE2-209ENST00000553308 FAM213AQ9BRX8 229 aa9.74□□□□□ -0.85
SYNE2-209ENST00000553308 ST6GALNAC4Q9H4F1 302 aa9.74□□□□□ -0.85
SYNE2-209ENST00000553308 FSCN3Q9NQT6 498 aa9.74□□□□□ -0.85
SYNE2-209ENST00000553308 TMEM74BQ9NUR3 256 aa9.74□□□□□ -0.85
SYNE2-209ENST00000553308 EVLQ9UI08 416 aaPredicted RBP9.74□□□□□ -0.85
SYNE2-209ENST00000553308 KLK13Q9UKR3 277 aa9.74□□□□□ -0.85
SYNE2-209ENST00000553308 SNX9Q9Y5X1 595 aa9.74□□□□□ -0.85
SYNE2-209ENST00000553308 CEP295Q9C0D2 2601 aa9.73□□□□□ -0.85
SYNE2-209ENST00000553308 BAHCC1Q9P281 2608 aa9.73□□□□□ -0.85
SYNE2-209ENST00000553308 SPAARA0A1B0GVQ0 90 aa9.73□□□□□ -0.85
SYNE2-209ENST00000553308 SGK1O00141 431 aa9.73□□□□□ -0.85
SYNE2-209ENST00000553308 LEFTY2O00292 366 aa9.73□□□□□ -0.85
SYNE2-209ENST00000553308 GABRDO14764 452 aa9.73□□□□□ -0.85
SYNE2-209ENST00000553308 ATP2C2O75185 946 aa9.73□□□□□ -0.85
SYNE2-209ENST00000553308 KLF8O95600 359 aaPredicted RBP9.73□□□□□ -0.85
SYNE2-209ENST00000553308 KRT19P08727 400 aa9.73□□□□□ -0.85
SYNE2-209ENST00000553308 ENGP17813 658 aa9.73□□□□□ -0.85
SYNE2-209ENST00000553308 TIE1P35590 1138 aa9.73□□□□□ -0.85
SYNE2-209ENST00000553308 P2RY2P41231 377 aa9.73□□□□□ -0.85
SYNE2-209ENST00000553308 SLC6A11P48066 632 aa9.73□□□□□ -0.85
SYNE2-209ENST00000553308 USP46P62068 366 aa9.73□□□□□ -0.85
SYNE2-209ENST00000553308 PSMC1P62191 440 aaKnown RBP9.73□□□□□ -0.85
SYNE2-209ENST00000553308 LPCAT2Q7L5N7 544 aa9.73□□□□□ -0.85
SYNE2-209ENST00000553308 DYMQ7RTS9 669 aa9.73□□□□□ -0.85
SYNE2-209ENST00000553308 ZNF720Q7Z2F6 126 aa9.73□□□□□ -0.85
SYNE2-209ENST00000553308 FILIP1Q7Z7B0 1213 aa9.73□□□□□ -0.85
SYNE2-209ENST00000553308 C12orf40Q86WS4 652 aa9.73□□□□□ -0.85
SYNE2-209ENST00000553308 CSGALNACT2Q8N6G5 542 aa9.73□□□□□ -0.85
SYNE2-209ENST00000553308 LRRC52Q8N7C0 313 aa9.73□□□□□ -0.85
SYNE2-209ENST00000553308 IL17RCQ8NAC3 791 aa9.73□□□□□ -0.85
SYNE2-209ENST00000553308 TXNDC5Q8NBS9 432 aaKnown RBP9.73□□□□□ -0.85
SYNE2-209ENST00000553308 HVCN1Q96D96 273 aa9.73□□□□□ -0.85
SYNE2-209ENST00000553308 FUBP3Q96I24 572 aaKnown RBP eCLIP9.73□□□□□ -0.85
SYNE2-209ENST00000553308 ZDHHC4Q9NPG8 344 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms