RNA–Protein interactions for RNA: ENST00000553065.1

DDX23-217, Transcript of DEAD-box helicase 23, humanhuman

TSL 2

Gene DDX23, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-217ENST00000553065 EPC1Q9H2F5 836 aa11.3□□□□□ -0.6
DDX23-217ENST00000553065 EBF3Q9H4W6 596 aa11.3□□□□□ -0.6
DDX23-217ENST00000553065 KIAA1586Q9HCI6 787 aa11.3□□□□□ -0.6
DDX23-217ENST00000553065 PARD6AQ9NPB6 346 aa11.3□□□□□ -0.6
DDX23-217ENST00000553065 TDP1Q9NUW8 608 aa11.3□□□□□ -0.6
DDX23-217ENST00000553065 PCDHGA2Q9Y5H1 932 aa11.3□□□□□ -0.6
DDX23-217ENST00000553065 ANAPC1Q9H1A4 1944 aa11.3□□□□□ -0.6
DDX23-217ENST00000553065 ATG2BQ96BY7 2078 aa11.29□□□□□ -0.6
DDX23-217ENST00000553065 LRRIQ3A6PVS8 624 aaPredicted RBP11.29□□□□□ -0.6
DDX23-217ENST00000553065 SOBPA7XYQ1 873 aa11.29□□□□□ -0.6
DDX23-217ENST00000553065 CLDN5O00501 218 aa11.29□□□□□ -0.6
DDX23-217ENST00000553065 STAU1O95793 577 aaKnown RBP11.29□□□□□ -0.6
DDX23-217ENST00000553065 TNNC2P02585 160 aa11.29□□□□□ -0.6
DDX23-217ENST00000553065 FAM163BP0C2L3 166 aa11.29□□□□□ -0.6
DDX23-217ENST00000553065 PFKFB1P16118 471 aa11.29□□□□□ -0.6
DDX23-217ENST00000553065 PTPN1P18031 435 aaKnown RBP11.29□□□□□ -0.6
DDX23-217ENST00000553065 TNNI1P19237 187 aa11.29□□□□□ -0.6
DDX23-217ENST00000553065 GNL1P36915 607 aaPredicted RBP11.29□□□□□ -0.6
DDX23-217ENST00000553065 CXCL12P48061 93 aa11.29□□□□□ -0.6
DDX23-217ENST00000553065 PGFP49763 221 aa11.29□□□□□ -0.6
DDX23-217ENST00000553065 GALK1P51570 392 aa11.29□□□□□ -0.6
DDX23-217ENST00000553065 KPNA1P52294 538 aaPredicted RBP11.29□□□□□ -0.6
DDX23-217ENST00000553065 MCCD1P59942 119 aaPredicted RBP11.29□□□□□ -0.6
DDX23-217ENST00000553065 SNRPFP62306 86 aaKnown RBP11.29□□□□□ -0.6
DDX23-217ENST00000553065 RUNX3Q13761 415 aa11.29□□□□□ -0.6
DDX23-217ENST00000553065 ZNF268Q14587 947 aaPredicted RBP11.29□□□□□ -0.6
DDX23-217ENST00000553065 VEPH1Q14D04 833 aa11.29□□□□□ -0.6
DDX23-217ENST00000553065 ZNF77Q15935 545 aa11.29□□□□□ -0.6
DDX23-217ENST00000553065 ARHGAP15Q53QZ3 475 aa11.29□□□□□ -0.6
DDX23-217ENST00000553065 TMEM196Q5HYL7 178 aa11.29□□□□□ -0.6
DDX23-217ENST00000553065 TDRD10Q5VZ19 366 aaKnown RBP11.29□□□□□ -0.6
DDX23-217ENST00000553065 HSCBQ8IWL3 235 aa11.29□□□□□ -0.6
DDX23-217ENST00000553065 SCN4BQ8IWT1 228 aa11.29□□□□□ -0.6
DDX23-217ENST00000553065 YAF2Q8IY57 180 aa11.29□□□□□ -0.6
DDX23-217ENST00000553065 SPEM1Q8N4L4 309 aa11.29□□□□□ -0.6
DDX23-217ENST00000553065 ARL14EPQ8N8R7 260 aaPredicted RBP11.29□□□□□ -0.6
DDX23-217ENST00000553065 MYCBPAPQ8TBZ2 947 aa11.29□□□□□ -0.6
DDX23-217ENST00000553065 RUBCNQ92622 972 aa11.29□□□□□ -0.6
DDX23-217ENST00000553065 FUBP3Q96I24 572 aaKnown RBP eCLIP11.29□□□□□ -0.6
DDX23-217ENST00000553065 SPATA17Q96L03 361 aa11.29□□□□□ -0.6
DDX23-217ENST00000553065 TTLL2Q9BWV7 592 aa11.29□□□□□ -0.6
DDX23-217ENST00000553065 B3GNT5Q9BYG0 378 aa11.29□□□□□ -0.6
DDX23-217ENST00000553065 MAGEC2Q9UBF1 373 aaPredicted RBP11.29□□□□□ -0.6
DDX23-217ENST00000553065 CDH9Q9ULB4 789 aa11.29□□□□□ -0.6
DDX23-217ENST00000553065 CHURC1-FNTBB4DL54 471 aa11.28□□□□□ -0.6
DDX23-217ENST00000553065 DPYSL4O14531 572 aa11.28□□□□□ -0.6
DDX23-217ENST00000553065 TRDMT1O14717 391 aaKnown RBP11.28□□□□□ -0.6
DDX23-217ENST00000553065 KINO60870 393 aaKnown RBP11.28□□□□□ -0.6
DDX23-217ENST00000553065 PAPSS2O95340 614 aaPredicted RBP11.28□□□□□ -0.6
DDX23-217ENST00000553065 CHRM1P11229 460 aaPredicted RBP11.28□□□□□ -0.6
DDX23-217ENST00000553065 PDIA4P13667 645 aaKnown RBP11.28□□□□□ -0.6
DDX23-217ENST00000553065 PCSK1P29120 753 aa11.28□□□□□ -0.6
DDX23-217ENST00000553065 GJA4P35212 333 aa11.28□□□□□ -0.6
DDX23-217ENST00000553065 ID4P47928 161 aa11.28□□□□□ -0.6
DDX23-217ENST00000553065 FNTBP49356 437 aa11.28□□□□□ -0.6
DDX23-217ENST00000553065 NDUFA8P51970 172 aa11.28□□□□□ -0.6
DDX23-217ENST00000553065 RPL10AP62906 217 aaKnown RBP11.28□□□□□ -0.6
DDX23-217ENST00000553065 MYO1EQ12965 1108 aa11.28□□□□□ -0.6
DDX23-217ENST00000553065 EML3Q32P44 896 aa11.28□□□□□ -0.6
DDX23-217ENST00000553065 ITPRIPL2Q3MIP1 535 aa11.28□□□□□ -0.6
DDX23-217ENST00000553065 WDR72Q3MJ13 1102 aa11.28□□□□□ -0.6
DDX23-217ENST00000553065 MDH1BQ5I0G3 518 aa11.28□□□□□ -0.6
DDX23-217ENST00000553065 STXBP4Q6ZWJ1 553 aa11.28□□□□□ -0.6
DDX23-217ENST00000553065 SPATA2LQ8IUW3 424 aaPredicted RBP11.28□□□□□ -0.6
DDX23-217ENST00000553065 SLC9A9Q8IVB4 645 aa11.28□□□□□ -0.6
DDX23-217ENST00000553065 ATRIPQ8WXE1 791 aa11.28□□□□□ -0.6
DDX23-217ENST00000553065 KCNK16Q96T55 309 aa11.28□□□□□ -0.6
DDX23-217ENST00000553065 ZNF518BQ9C0D4 1074 aa11.28□□□□□ -0.6
DDX23-217ENST00000553065 GOLPH3LQ9H4A5 285 aa11.28□□□□□ -0.6
DDX23-217ENST00000553065 VRTNQ9H8Y1 702 aa11.28□□□□□ -0.6
DDX23-217ENST00000553065 MAGEF1Q9HAY2 307 aa11.28□□□□□ -0.6
DDX23-217ENST00000553065 FAM13BQ9NYF5 915 aa11.28□□□□□ -0.6
DDX23-217ENST00000553065 CFAP45Q9UL16 551 aa11.28□□□□□ -0.6
DDX23-217ENST00000553065 PTPRDP23468 1912 aa11.28□□□□□ -0.6
DDX23-217ENST00000553065 UBE4BO95155 1302 aa11.28□□□□□ -0.6
DDX23-217ENST00000553065 SDK1Q7Z5N4 2213 aa11.27□□□□□ -0.61
DDX23-217ENST00000553065 ZNF840PA6NDX5 716 aa11.27□□□□□ -0.61
DDX23-217ENST00000553065 F8VP50 259 aa11.27□□□□□ -0.61
DDX23-217ENST00000553065 TNFRSF10BO14763 440 aa11.27□□□□□ -0.61
DDX23-217ENST00000553065 EGFP01133 1207 aa11.27□□□□□ -0.61
DDX23-217ENST00000553065 DDX6P26196 483 aaKnown RBP eCLIP11.27□□□□□ -0.61
DDX23-217ENST00000553065 RAP1GAPP47736 663 aa11.27□□□□□ -0.61
DDX23-217ENST00000553065 PLCB2Q00722 1185 aa11.27□□□□□ -0.61
DDX23-217ENST00000553065 MESP2Q0VG99 397 aa11.27□□□□□ -0.61
DDX23-217ENST00000553065 DPYDQ12882 1025 aa11.27□□□□□ -0.61
DDX23-217ENST00000553065 TAF12Q16514 161 aa11.27□□□□□ -0.61
DDX23-217ENST00000553065 DGKKQ5KSL6 1271 aa11.27□□□□□ -0.61
DDX23-217ENST00000553065 ZC3H14Q6PJT7 736 aaKnown RBP11.27□□□□□ -0.61
DDX23-217ENST00000553065 VSTM1Q6UX27 236 aa11.27□□□□□ -0.61
DDX23-217ENST00000553065 ZMIZ2Q8NF64 920 aa11.27□□□□□ -0.61
DDX23-217ENST00000553065 MRPS31Q92665 395 aaKnown RBP11.27□□□□□ -0.61
DDX23-217ENST00000553065 WBP2Q969T9 261 aa11.27□□□□□ -0.61
DDX23-217ENST00000553065 C8orf48Q96LL4 319 aa11.27□□□□□ -0.61
DDX23-217ENST00000553065 MMS19Q96T76 1030 aa11.27□□□□□ -0.61
DDX23-217ENST00000553065 FAM126AQ9BYI3 521 aaPredicted RBP11.27□□□□□ -0.61
DDX23-217ENST00000553065 SMYD3Q9H7B4 428 aa11.27□□□□□ -0.61
DDX23-217ENST00000553065 ECT2Q9H8V3 914 aa11.27□□□□□ -0.61
DDX23-217ENST00000553065 DLL3Q9NYJ7 618 aa11.27□□□□□ -0.61
DDX23-217ENST00000553065 IL37Q9NZH6 218 aa11.27□□□□□ -0.61
DDX23-217ENST00000553065 PDXKO00764 312 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms