RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 MRPL45Q9BRJ2 306 aaKnown RBP12.28□□□□□ -0.44
NEK3-204ENST00000552973 LRRC27Q9C0I9 530 aa12.28□□□□□ -0.44
NEK3-204ENST00000552973 BLZF1Q9H2G9 400 aa12.28□□□□□ -0.44
NEK3-204ENST00000552973 ARRDC1-AS1Q9H2J1 176 aa12.28□□□□□ -0.44
NEK3-204ENST00000552973 LINC00597Q9H2U6 94 aa12.28□□□□□ -0.44
NEK3-204ENST00000552973 CRTAC1Q9NQ79 661 aa12.28□□□□□ -0.44
NEK3-204ENST00000552973 KBTBD4Q9NVX7 518 aa12.28□□□□□ -0.44
NEK3-204ENST00000552973 GCNT4Q9P109 453 aa12.28□□□□□ -0.44
NEK3-204ENST00000552973 CDH9Q9ULB4 789 aa12.28□□□□□ -0.44
NEK3-204ENST00000552973 NME7Q9Y5B8 376 aa12.28□□□□□ -0.44
NEK3-204ENST00000552973 MORC2Q9Y6X9 1032 aaPredicted RBP12.28□□□□□ -0.44
NEK3-204ENST00000552973 DCHS1Q96JQ0 3298 aa12.28□□□□□ -0.44
NEK3-204ENST00000552973 SCN1AP35498 2009 aa12.28□□□□□ -0.44
NEK3-204ENST00000552973 F5P12259 2224 aa12.27□□□□□ -0.44
NEK3-204ENST00000552973 OTOGLQ3ZCN5 2332 aa12.27□□□□□ -0.44
NEK3-204ENST00000552973 KIAA0391O15091 583 aaKnown RBP12.27□□□□□ -0.45
NEK3-204ENST00000552973 TGFB1I1O43294 461 aa12.27□□□□□ -0.45
NEK3-204ENST00000552973 ATG13O75143 517 aa12.27□□□□□ -0.45
NEK3-204ENST00000552973 PPP6R2O75170 966 aa12.27□□□□□ -0.45
NEK3-204ENST00000552973 CCDC192P0DO97 292 aa12.27□□□□□ -0.45
NEK3-204ENST00000552973 HDCP19113 662 aa12.27□□□□□ -0.45
NEK3-204ENST00000552973 TNNI1P19237 187 aa12.27□□□□□ -0.45
NEK3-204ENST00000552973 CYP2J2P51589 502 aa12.27□□□□□ -0.45
NEK3-204ENST00000552973 USP46P62068 366 aa12.27□□□□□ -0.45
NEK3-204ENST00000552973 AMPD2Q01433 879 aa12.27□□□□□ -0.45
NEK3-204ENST00000552973 SURF1Q15526 300 aa12.27□□□□□ -0.45
NEK3-204ENST00000552973 ZNF77Q15935 545 aa12.27□□□□□ -0.45
NEK3-204ENST00000552973 MDH1BQ5I0G3 518 aa12.27□□□□□ -0.45
NEK3-204ENST00000552973 C4orf50Q6ZRC1 276 aa12.27□□□□□ -0.45
NEK3-204ENST00000552973 DPH6Q7L8W6 267 aa12.27□□□□□ -0.45
NEK3-204ENST00000552973 HS2ST1Q7LGA3 356 aa12.27□□□□□ -0.45
NEK3-204ENST00000552973 TRAPPC11Q7Z392 1133 aa12.27□□□□□ -0.45
NEK3-204ENST00000552973 KBTBD6Q86V97 674 aa12.27□□□□□ -0.45
NEK3-204ENST00000552973 WDR49Q8IV35 697 aa12.27□□□□□ -0.45
NEK3-204ENST00000552973 CPA6Q8N4T0 437 aa12.27□□□□□ -0.45
NEK3-204ENST00000552973 FSIP1Q8NA03 581 aa12.27□□□□□ -0.45
NEK3-204ENST00000552973 OR6B3Q8NGW1 331 aa12.27□□□□□ -0.45
NEK3-204ENST00000552973 SPATA18Q8TC71 538 aa12.27□□□□□ -0.45
NEK3-204ENST00000552973 ZNF507Q8TCN5 953 aa12.27□□□□□ -0.45
NEK3-204ENST00000552973 CD101Q93033 1021 aa12.27□□□□□ -0.45
NEK3-204ENST00000552973 TRMT2BQ96GJ1 504 aaKnown RBP12.27□□□□□ -0.45
NEK3-204ENST00000552973 PCED1BQ96HM7 432 aa12.27□□□□□ -0.45
NEK3-204ENST00000552973 FUBP3Q96I24 572 aaKnown RBP eCLIP12.27□□□□□ -0.45
NEK3-204ENST00000552973 ZNF396Q96N95 335 aaPredicted RBP12.27□□□□□ -0.45
NEK3-204ENST00000552973 HHIPQ96QV1 700 aa12.27□□□□□ -0.45
NEK3-204ENST00000552973 TSC2P49815 1807 aa12.27□□□□□ -0.45
NEK3-204ENST00000552973 ANTXRLA6NF34 631 aa12.26□□□□□ -0.45
NEK3-204ENST00000552973 SOBPA7XYQ1 873 aa12.26□□□□□ -0.45
NEK3-204ENST00000552973 SCAMP3O14828 347 aaKnown RBP12.26□□□□□ -0.45
NEK3-204ENST00000552973 SLC30A4O14863 429 aa12.26□□□□□ -0.45
NEK3-204ENST00000552973 RPP40O75818 363 aaKnown RBP12.26□□□□□ -0.45
NEK3-204ENST00000552973 ABL1P00519 1130 aa12.26□□□□□ -0.45
NEK3-204ENST00000552973 DRD1P21728 446 aa12.26□□□□□ -0.45
NEK3-204ENST00000552973 WARSP23381 471 aaKnown RBP12.26□□□□□ -0.45
NEK3-204ENST00000552973 ANXA13P27216 316 aa12.26□□□□□ -0.45
NEK3-204ENST00000552973 HOXA6P31267 233 aa12.26□□□□□ -0.45
NEK3-204ENST00000552973 GNL1P36915 607 aaPredicted RBP12.26□□□□□ -0.45
NEK3-204ENST00000552973 MAGEA11P43364 429 aa12.26□□□□□ -0.45
NEK3-204ENST00000552973 ZXDBP98169 803 aa12.26□□□□□ -0.45
NEK3-204ENST00000552973 AMPD3Q01432 767 aa12.26□□□□□ -0.45
NEK3-204ENST00000552973 IFRD2Q12894 506 aaPredicted RBP12.26□□□□□ -0.45
NEK3-204ENST00000552973 KCNB1Q14721 858 aa12.26□□□□□ -0.45
NEK3-204ENST00000552973 SF3A2Q15428 464 aaKnown RBP12.26□□□□□ -0.45
NEK3-204ENST00000552973 SNRNP35Q16560 246 aaKnown RBP12.26□□□□□ -0.45
NEK3-204ENST00000552973 EML3Q32P44 896 aa12.26□□□□□ -0.45
NEK3-204ENST00000552973 FAM26FQ5R3K3 315 aa12.26□□□□□ -0.45
NEK3-204ENST00000552973 DENND5BQ6ZUT9 1274 aa12.26□□□□□ -0.45
NEK3-204ENST00000552973 EPM2AIP1Q7L775 607 aaPredicted RBP12.26□□□□□ -0.45
NEK3-204ENST00000552973 LIMS2Q7Z4I7 341 aa12.26□□□□□ -0.45
NEK3-204ENST00000552973 IQUBQ8NA54 791 aa12.26□□□□□ -0.45
NEK3-204ENST00000552973 RPLP0P6Q8NHW5 317 aa12.26□□□□□ -0.45
NEK3-204ENST00000552973 NETO1Q8TDF5 533 aa12.26□□□□□ -0.45
NEK3-204ENST00000552973 SCFD1Q8WVM8 642 aa12.26□□□□□ -0.45
NEK3-204ENST00000552973 GAB3Q8WWW8 586 aa12.26□□□□□ -0.45
NEK3-204ENST00000552973 EZH1Q92800 747 aaPredicted RBP12.26□□□□□ -0.45
NEK3-204ENST00000552973 CNTNAP3BQ96NU0 1288 aa12.26□□□□□ -0.45
NEK3-204ENST00000552973 FNBP1Q96RU3 617 aa12.26□□□□□ -0.45
NEK3-204ENST00000552973 BACH2Q9BYV9 841 aa12.26□□□□□ -0.45
NEK3-204ENST00000552973 CNTNAP3Q9BZ76 1288 aa12.26□□□□□ -0.45
NEK3-204ENST00000552973 SNX25Q9H3E2 840 aa12.26□□□□□ -0.45
NEK3-204ENST00000552973 DPEP3Q9H4B8 488 aa12.26□□□□□ -0.45
NEK3-204ENST00000552973 KIAA1586Q9HCI6 787 aa12.26□□□□□ -0.45
NEK3-204ENST00000552973 AGPAT3Q9NRZ7 376 aa12.26□□□□□ -0.45
NEK3-204ENST00000552973 F8VP50 259 aa12.25□□□□□ -0.45
NEK3-204ENST00000552973 DCLK1O15075 740 aa12.25□□□□□ -0.45
NEK3-204ENST00000552973 POLR2DO15514 142 aaKnown RBP12.25□□□□□ -0.45
NEK3-204ENST00000552973 CUTAO60888 179 aa12.25□□□□□ -0.45
NEK3-204ENST00000552973 LRP3O75074 770 aa12.25□□□□□ -0.45
NEK3-204ENST00000552973 AFMP43652 599 aa12.25□□□□□ -0.45
NEK3-204ENST00000552973 CASP4P49662 377 aa12.25□□□□□ -0.45
NEK3-204ENST00000552973 CACNA2D1P54289 1103 aa12.25□□□□□ -0.45
NEK3-204ENST00000552973 USP4Q13107 963 aa12.25□□□□□ -0.45
NEK3-204ENST00000552973 WDR72Q3MJ13 1102 aa12.25□□□□□ -0.45
NEK3-204ENST00000552973 AASDHQ4L235 1098 aaPredicted RBP12.25□□□□□ -0.45
NEK3-204ENST00000552973 VSTM1Q6UX27 236 aa12.25□□□□□ -0.45
NEK3-204ENST00000552973 CACNA2D4Q7Z3S7 1137 aa12.25□□□□□ -0.45
NEK3-204ENST00000552973 MYCBPAPQ8TBZ2 947 aa12.25□□□□□ -0.45
NEK3-204ENST00000552973 ZNF516Q92618 1163 aa12.25□□□□□ -0.45
NEK3-204ENST00000552973 ELMO3Q96BJ8 720 aa12.25□□□□□ -0.45
NEK3-204ENST00000552973 SPATA17Q96L03 361 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms