RNA–Protein interactions for RNA: ENST00000552627.1

SMARCC2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 409 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-213ENST00000552627 TNPO1Q92973 898 aaKnown RBP6.17□□□□□ -1.42
SMARCC2-213ENST00000552627 PPP1R14AQ96A00 147 aa6.17□□□□□ -1.42
SMARCC2-213ENST00000552627 GBP4Q96PP9 640 aa6.17□□□□□ -1.42
SMARCC2-213ENST00000552627 USP28Q96RU2 1077 aa6.17□□□□□ -1.42
SMARCC2-213ENST00000552627 MMTAG2Q9BU76 263 aaKnown RBP6.17□□□□□ -1.42
SMARCC2-213ENST00000552627 CELF4Q9BZC1 486 aaKnown RBP6.17□□□□□ -1.42
SMARCC2-213ENST00000552627 POLD4Q9HCU8 107 aa6.17□□□□□ -1.42
SMARCC2-213ENST00000552627 EMC9Q9Y3B6 208 aa6.17□□□□□ -1.42
SMARCC2-213ENST00000552627 NOC2LQ9Y3T9 749 aaKnown RBP6.17□□□□□ -1.42
SMARCC2-213ENST00000552627 BACE2Q9Y5Z0 518 aa6.17□□□□□ -1.42
SMARCC2-213ENST00000552627 LAMA3Q16787 3333 aa6.17□□□□□ -1.42
SMARCC2-213ENST00000552627 IGKV6-21A0A0C4DH24 114 aa6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 A0A1W2PPC1 479 aa6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 A0A1W2PQJ5 194 aa6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 C2orf71A6NGG8 1288 aa6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 E9PMD0 336 aa6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 M0QZ92 97 aa6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 LAD1O00515 517 aa6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 MAGEB2O15479 319 aa6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 USO1O60763 962 aaKnown RBP6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 CAND2O75155 1236 aa6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 GPR32O75388 356 aa6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 MAFO75444 373 aaPredicted RBP6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 KCNH1O95259 989 aa6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 LYPLA2O95372 231 aa6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 PFKMP08237 780 aa6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 ACTN1P12814 892 aa6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 L1CAMP32004 1257 aa6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 PRPHP41219 470 aa6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 RARRES1P49788 294 aa6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 GPC3P51654 580 aa6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 NLRP11P59045 1033 aaKnown RBP6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 WDR5P61964 334 aaKnown RBP6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 YBX1P67809 324 aaKnown RBP6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 SRSF3P84103 164 aaKnown RBP6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 PTPAQ15257 358 aa6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 LRIT3Q3SXY7 679 aa6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 CNKSR3Q6P9H4 555 aa6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 TSHZ1Q6ZSZ6 1077 aa6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 USP49Q70CQ1 688 aa6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 Q7L0L9 218 aa6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 RPAINQ86UA6 219 aa6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 FAM228AQ86W67 206 aa6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 RHPN2Q8IUC4 686 aa6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 ERMNQ8TAM6 284 aa6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 NEK9Q8TD19 979 aa6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 LRRC15Q8TF66 581 aa6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 PRPF31Q8WWY3 499 aaKnown RBP6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 SEPT8Q92599 483 aa6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 NLRP4Q96MN2 994 aa6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 CCDC43Q96MW1 224 aaKnown RBP6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 SCLT1Q96NL6 688 aa6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 CLIC6Q96NY7 704 aa6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 POLR3CQ9BUI4 534 aaPredicted RBP6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 IFIH1Q9BYX4 1025 aaKnown RBP6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 TMX1Q9H3N1 280 aa6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 TUFT1Q9NNX1 390 aa6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 CD320Q9NPF0 282 aa6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 GPRC5CQ9NQ84 441 aa6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 XPNPEP1Q9NQW7 623 aa6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 DDX19AQ9NUU7 478 aaKnown RBP6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 SIRT5Q9NXA8 310 aa6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 SUCLA2Q9P2R7 463 aaPredicted RBP6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 FBXO2Q9UK22 296 aaPredicted RBP6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 PADI3Q9ULW8 664 aa6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 SMG5Q9UPR3 1016 aaKnown RBP6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 ZDHHC9Q9Y397 364 aa6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 R3HCC1Q9Y3T6 440 aaKnown RBP6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 SLC4A7Q9Y6M7 1214 aa6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 COL4A4P53420 1690 aaPredicted RBP6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 COL4A6Q14031 1691 aa6.16□□□□□ -1.42
SMARCC2-213ENST00000552627 A0A087WZ62 844 aa6.15□□□□□ -1.42
SMARCC2-213ENST00000552627 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.15□□□□□ -1.42
SMARCC2-213ENST00000552627 LCHNA4D1U4 455 aa6.15□□□□□ -1.42
SMARCC2-213ENST00000552627 ARHGEF35A5YM69 484 aa6.15□□□□□ -1.42
SMARCC2-213ENST00000552627 NPIPB6E9PJ23 425 aa6.15□□□□□ -1.42
SMARCC2-213ENST00000552627 MGEA5O60502 916 aa6.15□□□□□ -1.42
SMARCC2-213ENST00000552627 DKC1O60832 514 aaKnown RBP eCLIP6.15□□□□□ -1.42
SMARCC2-213ENST00000552627 RPS6KA5O75582 802 aa6.15□□□□□ -1.42
SMARCC2-213ENST00000552627 MSL3P1P0C860 447 aa6.15□□□□□ -1.42
SMARCC2-213ENST00000552627 SRGAP2CP0DJJ0 459 aa6.15□□□□□ -1.42
SMARCC2-213ENST00000552627 ATP2A2P16615 1042 aaKnown RBP6.15□□□□□ -1.42
SMARCC2-213ENST00000552627 RPA1P27694 616 aa6.15□□□□□ -1.42
SMARCC2-213ENST00000552627 VIPR1P32241 457 aa6.15□□□□□ -1.42
SMARCC2-213ENST00000552627 KCNJ6P48051 423 aa6.15□□□□□ -1.42
SMARCC2-213ENST00000552627 GATMP50440 423 aa6.15□□□□□ -1.42
SMARCC2-213ENST00000552627 CRYBB1P53674 252 aaPredicted RBP6.15□□□□□ -1.42
SMARCC2-213ENST00000552627 LAMTOR4Q0VGL1 99 aa6.15□□□□□ -1.42
SMARCC2-213ENST00000552627 PDIA5Q14554 519 aa6.15□□□□□ -1.42
SMARCC2-213ENST00000552627 KARSQ15046 597 aaKnown RBP6.15□□□□□ -1.42
SMARCC2-213ENST00000552627 KRT79Q5XKE5 535 aa6.15□□□□□ -1.42
SMARCC2-213ENST00000552627 HAUS3Q68CZ6 603 aa6.15□□□□□ -1.42
SMARCC2-213ENST00000552627 OTUD6AQ7L8S5 288 aa6.15□□□□□ -1.42
SMARCC2-213ENST00000552627 RTN4RL1Q86UN2 441 aaPredicted RBP6.15□□□□□ -1.42
SMARCC2-213ENST00000552627 CABP7Q86V35 215 aa6.15□□□□□ -1.42
SMARCC2-213ENST00000552627 CILP2Q8IUL8 1156 aa6.15□□□□□ -1.42
SMARCC2-213ENST00000552627 HERC6Q8IVU3 1022 aa6.15□□□□□ -1.42
SMARCC2-213ENST00000552627 MYOCDQ8IZQ8 938 aa6.15□□□□□ -1.42
SMARCC2-213ENST00000552627 NME8Q8N427 588 aa6.15□□□□□ -1.42
SMARCC2-213ENST00000552627 EPSTI1Q96J88 318 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms