RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 FAM71AQ8IYT1 594 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 CACNA2D3Q8IZS8 1091 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 SYNPOQ8N3V7 929 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 XXYLT1Q8NBI6 393 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 ZSWIM2Q8NEG5 633 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 RAPGEF5Q92565 580 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 MAGOHBQ96A72 148 aaKnown RBP6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 ARHGEF26Q96DR7 871 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 SGSM3Q96HU1 749 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 FAM81BQ96LP2 452 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 XPO6Q96QU8 1125 aaKnown RBP6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 ZSWIM1Q9BR11 485 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 TACO1Q9BSH4 297 aaKnown RBP6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 SPATA9Q9BWV2 254 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 THAP2Q9H0W7 228 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 UNC45AQ9H3U1 944 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 GOLPH3Q9H4A6 298 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 RABEP2Q9H5N1 569 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 ACSS3Q9H6R3 686 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 YY1AP1Q9H869 796 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 PPANQ9NQ55 473 aaKnown RBP6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 A1CFQ9NQ94 594 aaKnown RBP6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 SEPT11Q9NVA2 429 aaKnown RBP6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 CTTNBP2NLQ9P2B4 639 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 UVRAGQ9P2Y5 699 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 DDX20Q9UHI6 824 aaKnown RBP6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 EXOC7Q9UPT5 735 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 PCDHA3Q9Y5H8 950 aa6.39□□□□□ -1.39
CHMP4A-210ENST00000552620 H0YIN7 160 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 IPO5O00410 1097 aaKnown RBP6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 PPP1R12AO14974 1030 aaPredicted RBP6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 RGS16O15492 202 aaPredicted RBP6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 CHMP2AO43633 222 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 ALX3O95076 343 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 CYP1A2P05177 515 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 TRIM49P0CI25 452 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 TRIM49CP0CI26 452 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 ARP10275 920 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 DRD4P21917 467 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 COMTP21964 271 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 ABCD1P33897 745 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 MAN1A1P33908 653 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 COILP38432 576 aaPredicted RBP6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 MMP13P45452 471 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 CACNB3P54284 484 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 GHRHRQ02643 423 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 CAV1Q03135 178 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 MAP7Q14244 749 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 ITIH4Q14624 930 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 COG2Q14746 738 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 ARHGAP44Q17R89 818 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 SV2CQ496J9 727 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 MEX3CQ5U5Q3 659 aaKnown RBP6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 DCAF12L1Q5VU92 463 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 FKBP1CQ5VVH2 108 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 TDRD10Q5VZ19 366 aaKnown RBP6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 HEATR6Q6AI08 1181 aaKnown RBP6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 Q6ZS46 218 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 TRMT10CQ7L0Y3 403 aaKnown RBP6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 ENOSF1Q7L5Y1 443 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 TAOK1Q7L7X3 1001 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 MIER3Q7Z3K6 550 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 CCDC91Q7Z6B0 441 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 UBE3DQ7Z6J8 389 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 CPLX4Q7Z7G2 160 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 USP37Q86T82 979 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 DNAAF5Q86Y56 855 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 SLC13A5Q86YT5 568 aaPredicted RBP6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 RPUSD2Q8IZ73 545 aaKnown RBP6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 ANKS4BQ8N8V4 417 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 PRELID2Q8N945 189 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 OR2W6PQ8NHA6 318 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 MAGEC3Q8TD91 643 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 FAM151AQ8WW52 585 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 KAT2BQ92831 832 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 KIFAP3Q92845 792 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 SLCO2A1Q92959 643 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 ZNF622Q969S3 477 aaKnown RBP eCLIP6.38□□□□□ -1.393e-8■■■■□ 19.8
CHMP4A-210ENST00000552620 HOOK2Q96ED9 719 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 CHMP6Q96FZ7 201 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 CCDC114Q96M63 670 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 APBA2Q99767 749 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 LXNQ9BS40 222 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 CELF4Q9BZC1 486 aaKnown RBP6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 MKRN2Q9H000 416 aaKnown RBP6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 DPH5Q9H2P9 285 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 CCDC134Q9H6E4 229 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 TDRD3Q9H7E2 651 aaKnown RBP6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 DBNDD1Q9H9R9 158 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 HOMER3Q9NSC5 361 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 ANKEF1Q9NU02 776 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 TBC1D22BQ9NU19 505 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 TAS2R14Q9NYV8 317 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 WHRNQ9P202 907 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 CNOT8Q9UFF9 292 aaKnown RBP6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 KCNG1Q9UIX4 513 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 COG5Q9UP83 839 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 ATP8A1Q9Y2Q0 1164 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 SNX24Q9Y343 169 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 PRKAB1Q9Y478 270 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms