RNA–Protein interactions for RNA: ENST00000552561.5

TMEM106C-220, Transcript of transmembrane protein 106C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM106C, Length 810 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-220ENST00000552561 FAM13AO94988 1023 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 EPN2O95208 641 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 KCNK5O95279 499 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 NFICP08651 508 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 OR4Q2P0C623 313 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 ZNF806P0C7X5 589 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 MYL4P12829 197 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 PDIA4P13667 645 aaKnown RBP4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 LIG1P18858 919 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 PDCP20941 246 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 DRD1P21728 446 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 CCNE1P24864 410 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 GABRR2P28476 465 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 PPP3CCP48454 512 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 LHX1P48742 406 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 NASPP49321 788 aaPredicted RBP4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 NLRP12P59046 1061 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 SNRPFP62306 86 aaKnown RBP4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 RPL10AP62906 217 aaKnown RBP4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 AMPD2Q01433 879 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 SATB1Q01826 763 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 GRIN1Q05586 938 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 FAM160A1Q05DH4 1040 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 USP4Q13107 963 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 RUNX3Q13761 415 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 GRM2Q14416 872 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 VEPH1Q14D04 833 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 SLC39A14Q15043 492 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 KARSQ15046 597 aaKnown RBP4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 PDGFRLQ15198 375 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 ZNF77Q15935 545 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 ITPRIPL2Q3MIP1 535 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 SV2CQ496J9 727 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 SEZ6Q53EL9 994 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 ARHGAP15Q53QZ3 475 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 STXBP5Q5T5C0 1151 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 L1TD1Q5T7N2 865 aaKnown RBP4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 SNX30Q5VWJ9 437 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 DAB2IPQ5VWQ8 1189 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 ADALQ6DHV7 355 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 ARMCX5Q6P1M9 558 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 TSSK4Q6SA08 328 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 VSTM1Q6UX27 236 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 DSTYKQ6XUX3 929 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 SYT13Q7L8C5 426 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 USP37Q86T82 979 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 RASSF3Q86WH2 238 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 GPBP1Q86WP2 473 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 DCP1BQ8IZD4 617 aaKnown RBP4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 THEM5Q8N1Q8 247 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 MYCT1Q8N699 235 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 TTC9BQ8N6N2 239 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 CCDC26Q8TAB7 109 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 ADAM32Q8TC27 787 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 CSGALNACT1Q8TDX6 532 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 USP13Q92995 863 aaPredicted RBP4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 CDK5RAP3Q96JB5 506 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 SPATA17Q96L03 361 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 ZNF560Q96MR9 790 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 TMEM209Q96SK2 561 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 ATXN3LQ9H3M9 355 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 VRTNQ9H8Y1 702 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 TDP1Q9NUW8 608 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 KBTBD4Q9NVX7 518 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 THG1LQ9NWX6 298 aaKnown RBP4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 DPP3Q9NY33 737 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 GCNT4Q9P109 453 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 UXTQ9UBK9 157 aaPredicted RBP4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 AGO2Q9UKV8 859 aaKnown RBP4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 ITGA11Q9UKX5 1188 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 ARHGAP26Q9UNA1 814 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 PCDHB5Q9Y5E4 795 aa4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 TIMM13Q9Y5L4 95 aaPredicted RBP4.77□□□□□ -1.65
TMEM106C-220ENST00000552561 LAMA1P25391 3075 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 PCNX2A6NKB5 2137 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 CREBBPQ92793 2442 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 TCHHQ07283 1943 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 AKAP13Q12802 2813 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 NPHP3-ACAD11A0A0J9YXS1 232 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 OTOL1A6NHN0 477 aaPredicted RBP4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 MYMKA6NI61 221 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 J3QKU1 62 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 CYB561D2O14569 222 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 CAPN9O14815 690 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 EIF3DO15371 548 aaKnown RBP eCLIP4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 EXTL3O43909 919 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 TBCAO75347 108 aaKnown RBP4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 TACC1O75410 805 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 HARSP12081 509 aaKnown RBP4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 GJA1P17302 382 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 PCSK1P29120 753 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 NMT1P30419 496 aaKnown RBP4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 EIF2DP41214 584 aaKnown RBP4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 ACOT2P49753 483 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 PDE6CP51160 858 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 GUCY2FP51841 1108 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 ARPP19P56211 112 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 WNT7BP56706 349 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 NOP14P78316 857 aaKnown RBP4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 CLDN10P78369 228 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms