RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	RGS7	P49802	495 aa		13.38	□□□□□ -0.27
CACNB3-223	ENST00000552480	PLCB3	Q01970	1234 aa		13.38	□□□□□ -0.27
CACNB3-223	ENST00000552480	OGDH	Q02218	1023 aa		13.38	□□□□□ -0.27
CACNB3-223	ENST00000552480	RNASEL	Q05823	741 aa	Known RBP	13.38	□□□□□ -0.27
CACNB3-223	ENST00000552480	ZNF252P-AS1	Q0IIN9	211 aa		13.38	□□□□□ -0.27
CACNB3-223	ENST00000552480	PAN2	Q504Q3	1202 aa	Known RBP	13.38	□□□□□ -0.27
CACNB3-223	ENST00000552480	MDH1B	Q5I0G3	518 aa		13.38	□□□□□ -0.27
CACNB3-223	ENST00000552480	FAM102A	Q5T9C2	384 aa	Predicted RBP	13.38	□□□□□ -0.27
CACNB3-223	ENST00000552480	KIAA0319	Q5VV43	1072 aa		13.38	□□□□□ -0.27
CACNB3-223	ENST00000552480	OR6B2	Q6IFH4	312 aa		13.38	□□□□□ -0.27
CACNB3-223	ENST00000552480	CCDC70	Q6NSX1	233 aa		13.38	□□□□□ -0.27
CACNB3-223	ENST00000552480	FAM183BP	Q6ZVS7	135 aa		13.38	□□□□□ -0.27
CACNB3-223	ENST00000552480	ZDHHC17	Q8IUH5	632 aa		13.38	□□□□□ -0.27
CACNB3-223	ENST00000552480	NPAS4	Q8IUM7	802 aa		13.38	□□□□□ -0.27
CACNB3-223	ENST00000552480	RHOT1	Q8IXI2	618 aa		13.38	□□□□□ -0.27
CACNB3-223	ENST00000552480	ABI1	Q8IZP0	508 aa		13.38	□□□□□ -0.27
CACNB3-223	ENST00000552480	FUK	Q8N0W3	1084 aa		13.38	□□□□□ -0.27
CACNB3-223	ENST00000552480	CRIPAK	Q8N1N5	446 aa		13.38	□□□□□ -0.27
CACNB3-223	ENST00000552480	JOSD2	Q8TAC2	188 aa		13.38	□□□□□ -0.27
CACNB3-223	ENST00000552480	CASD1	Q96PB1	797 aa		13.38	□□□□□ -0.27
CACNB3-223	ENST00000552480	PLVAP	Q9BX97	442 aa		13.38	□□□□□ -0.27
CACNB3-223	ENST00000552480	ANKZF1	Q9H8Y5	726 aa		13.38	□□□□□ -0.27
CACNB3-223	ENST00000552480	CRTAC1	Q9NQ79	661 aa		13.38	□□□□□ -0.27
CACNB3-223	ENST00000552480	RBM12	Q9NTZ6	932 aa	Known RBP	13.38	□□□□□ -0.27
CACNB3-223	ENST00000552480	TMEM39A	Q9NV64	488 aa		13.38	□□□□□ -0.27
CACNB3-223	ENST00000552480	TMEM59L	Q9UK28	342 aa		13.38	□□□□□ -0.27
CACNB3-223	ENST00000552480	TIMM13	Q9Y5L4	95 aa	Predicted RBP	13.38	□□□□□ -0.27
CACNB3-223	ENST00000552480	SCN5A	Q14524	2016 aa		13.38	□□□□□ -0.27
CACNB3-223	ENST00000552480	CCDC188	H7C350	402 aa		13.37	□□□□□ -0.27
CACNB3-223	ENST00000552480		I3L4J1	428 aa		13.37	□□□□□ -0.27
CACNB3-223	ENST00000552480	ITGB1	P05556	798 aa		13.37	□□□□□ -0.27
CACNB3-223	ENST00000552480	RHOXF2B	P0C7M4	288 aa		13.37	□□□□□ -0.27
CACNB3-223	ENST00000552480	PSMA2	P25787	234 aa		13.37	□□□□□ -0.27
CACNB3-223	ENST00000552480	RFC1	P35251	1148 aa	Predicted RBP	13.37	□□□□□ -0.27
CACNB3-223	ENST00000552480	SCNN1A	P37088	669 aa		13.37	□□□□□ -0.27
CACNB3-223	ENST00000552480	PLA2G4A	P47712	749 aa		13.37	□□□□□ -0.27
CACNB3-223	ENST00000552480	OR1G1	P47890	313 aa		13.37	□□□□□ -0.27
CACNB3-223	ENST00000552480	SLC8A3	P57103	927 aa		13.37	□□□□□ -0.27
CACNB3-223	ENST00000552480	RNASE9	P60153	205 aa	Known RBP	13.37	□□□□□ -0.27
CACNB3-223	ENST00000552480	ZNF211	Q13398	564 aa	Predicted RBP	13.37	□□□□□ -0.27
CACNB3-223	ENST00000552480	LRRC26	Q2I0M4	334 aa		13.37	□□□□□ -0.27
CACNB3-223	ENST00000552480	LRRC38	Q5VT99	294 aa		13.37	□□□□□ -0.27
CACNB3-223	ENST00000552480	CNKSR3	Q6P9H4	555 aa		13.37	□□□□□ -0.27
CACNB3-223	ENST00000552480	DEFB128	Q7Z7B8	93 aa		13.37	□□□□□ -0.27
CACNB3-223	ENST00000552480	HASPIN	Q8TF76	798 aa		13.37	□□□□□ -0.27
CACNB3-223	ENST00000552480	PAWR	Q96IZ0	340 aa	Known RBP	13.37	□□□□□ -0.27
CACNB3-223	ENST00000552480	HSFY1	Q96LI6	401 aa		13.37	□□□□□ -0.27
CACNB3-223	ENST00000552480	RTP3	Q9BQQ7	232 aa		13.37	□□□□□ -0.27
CACNB3-223	ENST00000552480	RHOXF2	Q9BQY4	288 aa		13.37	□□□□□ -0.27
CACNB3-223	ENST00000552480	ACBD6	Q9BR61	282 aa		13.37	□□□□□ -0.27
CACNB3-223	ENST00000552480	MED10	Q9BTT4	135 aa		13.37	□□□□□ -0.27
CACNB3-223	ENST00000552480	DUSP16	Q9BY84	665 aa		13.37	□□□□□ -0.27
CACNB3-223	ENST00000552480	MRPL9	Q9BYD2	267 aa	Known RBP	13.37	□□□□□ -0.27
CACNB3-223	ENST00000552480	B3GNT5	Q9BYG0	378 aa		13.37	□□□□□ -0.27
CACNB3-223	ENST00000552480	UST	Q9Y2C2	406 aa		13.37	□□□□□ -0.27
CACNB3-223	ENST00000552480	TARSL2	A2RTX5	802 aa	Known RBP	13.36	□□□□□ -0.27
CACNB3-223	ENST00000552480	KRIT1	O00522	736 aa		13.36	□□□□□ -0.27
CACNB3-223	ENST00000552480	FGG	P02679	453 aa		13.36	□□□□□ -0.27
CACNB3-223	ENST00000552480	TUBB	P07437	444 aa		13.36	□□□□□ -0.27
CACNB3-223	ENST00000552480	FAM200B	P0CF97	657 aa		13.36	□□□□□ -0.27
CACNB3-223	ENST00000552480	PYGM	P11217	842 aa		13.36	□□□□□ -0.27
CACNB3-223	ENST00000552480	NPR3	P17342	541 aa		13.36	□□□□□ -0.27
CACNB3-223	ENST00000552480	TAS2R40	P59535	323 aa		13.36	□□□□□ -0.27
CACNB3-223	ENST00000552480	SLC6A3	Q01959	620 aa		13.36	□□□□□ -0.27
CACNB3-223	ENST00000552480	ACAP1	Q15027	740 aa		13.36	□□□□□ -0.27
CACNB3-223	ENST00000552480	LONRF2	Q1L5Z9	754 aa		13.36	□□□□□ -0.27
CACNB3-223	ENST00000552480	GLE1	Q53GS7	698 aa	Known RBP	13.36	□□□□□ -0.27
CACNB3-223	ENST00000552480	INTS6L	Q5JSJ4	861 aa	Known RBP	13.36	□□□□□ -0.27
CACNB3-223	ENST00000552480	OVOS1	Q6IE37	1185 aa		13.36	□□□□□ -0.27
CACNB3-223	ENST00000552480	CC2D1A	Q6P1N0	951 aa	Predicted RBP	13.36	□□□□□ -0.27
CACNB3-223	ENST00000552480	OLFML1	Q6UWY5	402 aa		13.36	□□□□□ -0.27
CACNB3-223	ENST00000552480	PAQR9	Q6ZVX9	377 aa		13.36	□□□□□ -0.27
CACNB3-223	ENST00000552480	NECAB2	Q7Z6G3	386 aa		13.36	□□□□□ -0.27
CACNB3-223	ENST00000552480	FAM35A	Q86V20	835 aa		13.36	□□□□□ -0.27
CACNB3-223	ENST00000552480	KATNAL2	Q8IYT4	538 aa		13.36	□□□□□ -0.27
CACNB3-223	ENST00000552480	THEM5	Q8N1Q8	247 aa		13.36	□□□□□ -0.27
CACNB3-223	ENST00000552480	MYCBPAP	Q8TBZ2	947 aa		13.36	□□□□□ -0.27
CACNB3-223	ENST00000552480	RUBCN	Q92622	972 aa		13.36	□□□□□ -0.27
CACNB3-223	ENST00000552480	PARD6B	Q9BYG5	372 aa		13.36	□□□□□ -0.27
CACNB3-223	ENST00000552480	EPC1	Q9H2F5	836 aa		13.36	□□□□□ -0.27
CACNB3-223	ENST00000552480	NRDE2	Q9H7Z3	1164 aa		13.36	□□□□□ -0.27
CACNB3-223	ENST00000552480	DNAJB4	Q9UDY4	337 aa		13.36	□□□□□ -0.27
CACNB3-223	ENST00000552480	MYBPHL	A2RUH7	354 aa		13.35	□□□□□ -0.27
CACNB3-223	ENST00000552480		F8VP50	259 aa		13.35	□□□□□ -0.27
CACNB3-223	ENST00000552480		F8W810	466 aa		13.35	□□□□□ -0.27
CACNB3-223	ENST00000552480	PIK3R2	O00459	728 aa		13.35	□□□□□ -0.27
CACNB3-223	ENST00000552480	CLDN5	O00501	218 aa		13.35	□□□□□ -0.27
CACNB3-223	ENST00000552480	DPYSL4	O14531	572 aa		13.35	□□□□□ -0.27
CACNB3-223	ENST00000552480	PAPSS1	O43252	624 aa	Predicted RBP	13.35	□□□□□ -0.27
CACNB3-223	ENST00000552480	TRAPPC3	O43617	180 aa		13.35	□□□□□ -0.27
CACNB3-223	ENST00000552480	GABBR2	O75899	941 aa		13.35	□□□□□ -0.27
CACNB3-223	ENST00000552480	H2AFX	P16104	143 aa	Predicted RBP	13.35	□□□□□ -0.27
CACNB3-223	ENST00000552480	GPD1	P21695	349 aa		13.35	□□□□□ -0.27
CACNB3-223	ENST00000552480	SSR1	P43307	286 aa	Known RBP	13.35	□□□□□ -0.27
CACNB3-223	ENST00000552480	GATM	P50440	423 aa		13.35	□□□□□ -0.27
CACNB3-223	ENST00000552480	IKBKE	Q14164	716 aa		13.35	□□□□□ -0.27
CACNB3-223	ENST00000552480	CCDC142	Q17RM4	750 aa		13.35	□□□□□ -0.27
CACNB3-223	ENST00000552480	C8orf74	Q6P047	294 aa		13.35	□□□□□ -0.27
CACNB3-223	ENST00000552480	FAM171B	Q6P995	826 aa		13.35	□□□□□ -0.27
CACNB3-223	ENST00000552480	CLEC20A	Q6ZU45	233 aa		13.35	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms