RNA–Protein interactions for RNA: ENST00000552341.5

PFDN5-216, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 1,980 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-216ENST00000552341 FAM153AQ9UHL3 310 aa11.43□□□□□ -0.58
PFDN5-216ENST00000552341 PIK3R2O00459 728 aa11.43□□□□□ -0.58
PFDN5-216ENST00000552341 CYB561D2O14569 222 aa11.43□□□□□ -0.58
PFDN5-216ENST00000552341 INPPL1O15357 1258 aa11.43□□□□□ -0.58
PFDN5-216ENST00000552341 LRCH4O75427 683 aa11.43□□□□□ -0.58
PFDN5-216ENST00000552341 AARSP49588 968 aaKnown RBP eCLIP11.43□□□□□ -0.58
PFDN5-216ENST00000552341 CDK7P50613 346 aa11.43□□□□□ -0.58
PFDN5-216ENST00000552341 DR1Q01658 176 aa11.43□□□□□ -0.58
PFDN5-216ENST00000552341 DHX34Q14147 1143 aaKnown RBP11.43□□□□□ -0.58
PFDN5-216ENST00000552341 ARHGEF6Q15052 776 aa11.43□□□□□ -0.58
PFDN5-216ENST00000552341 CCDC142Q17RM4 750 aa11.43□□□□□ -0.58
PFDN5-216ENST00000552341 KIAA0319Q5VV43 1072 aa11.43□□□□□ -0.58
PFDN5-216ENST00000552341 WSCD1Q658N2 575 aa11.43□□□□□ -0.58
PFDN5-216ENST00000552341 EMBQ6PCB8 327 aa11.43□□□□□ -0.58
PFDN5-216ENST00000552341 OLFML1Q6UWY5 402 aa11.43□□□□□ -0.58
PFDN5-216ENST00000552341 DDX42Q86XP3 938 aaKnown RBP eCLIP11.43□□□□□ -0.58
PFDN5-216ENST00000552341 ANKRD52Q8NB46 1076 aa11.43□□□□□ -0.58
PFDN5-216ENST00000552341 SH3TC2Q8TF17 1288 aa11.43□□□□□ -0.58
PFDN5-216ENST00000552341 IFT81Q8WYA0 676 aa11.43□□□□□ -0.58
PFDN5-216ENST00000552341 MAGOHBQ96A72 148 aaKnown RBP11.43□□□□□ -0.58
PFDN5-216ENST00000552341 SENP8Q96LD8 212 aa11.43□□□□□ -0.58
PFDN5-216ENST00000552341 TRIM51Q9BSJ1 452 aa11.43□□□□□ -0.58
PFDN5-216ENST00000552341 SNX25Q9H3E2 840 aa11.43□□□□□ -0.58
PFDN5-216ENST00000552341 SYNCQ9H7C4 482 aa11.43□□□□□ -0.58
PFDN5-216ENST00000552341 VIPAS39Q9H9C1 493 aa11.43□□□□□ -0.58
PFDN5-216ENST00000552341 RSAD1Q9HA92 442 aa11.43□□□□□ -0.58
PFDN5-216ENST00000552341 STARD7Q9NQZ5 370 aa11.43□□□□□ -0.58
PFDN5-216ENST00000552341 ST7Q9NRC1 585 aa11.43□□□□□ -0.58
PFDN5-216ENST00000552341 C2CD4BA6NLJ0 364 aa11.42□□□□□ -0.58
PFDN5-216ENST00000552341 ARVCFO00192 962 aa11.42□□□□□ -0.58
PFDN5-216ENST00000552341 PODXLO00592 558 aa11.42□□□□□ -0.58
PFDN5-216ENST00000552341 PAPSS1O43252 624 aaPredicted RBP11.42□□□□□ -0.58
PFDN5-216ENST00000552341 ATP2C2O75185 946 aa11.42□□□□□ -0.58
PFDN5-216ENST00000552341 RALAP11233 206 aa11.42□□□□□ -0.58
PFDN5-216ENST00000552341 PSMA2P25787 234 aa11.42□□□□□ -0.58
PFDN5-216ENST00000552341 IL1R2P27930 398 aa11.42□□□□□ -0.58
PFDN5-216ENST00000552341 TKTP29401 623 aaKnown RBP11.42□□□□□ -0.58
PFDN5-216ENST00000552341 RPL9P32969 192 aaKnown RBP11.42□□□□□ -0.58
PFDN5-216ENST00000552341 COILP38432 576 aaPredicted RBP11.42□□□□□ -0.58
PFDN5-216ENST00000552341 RGS7P49802 495 aa11.42□□□□□ -0.58
PFDN5-216ENST00000552341 ADCY2Q08462 1091 aa11.42□□□□□ -0.58
PFDN5-216ENST00000552341 CUL1Q13616 776 aa11.42□□□□□ -0.58
PFDN5-216ENST00000552341 DUPD1Q68J44 220 aa11.42□□□□□ -0.58
PFDN5-216ENST00000552341 CCDC137Q6PK04 289 aaKnown RBP11.42□□□□□ -0.58
PFDN5-216ENST00000552341 CD300LGQ6UXG3 332 aa11.42□□□□□ -0.58
PFDN5-216ENST00000552341 PAQR9Q6ZVX9 377 aa11.42□□□□□ -0.58
PFDN5-216ENST00000552341 POLNQ7Z5Q5 900 aa11.42□□□□□ -0.58
PFDN5-216ENST00000552341 ECHDC2Q86YB7 292 aa11.42□□□□□ -0.58
PFDN5-216ENST00000552341 B3GALNT2Q8NCR0 500 aa11.42□□□□□ -0.58
PFDN5-216ENST00000552341 LINC01599Q8WXQ3 324 aa11.42□□□□□ -0.58
PFDN5-216ENST00000552341 SLCO2A1Q92959 643 aa11.42□□□□□ -0.58
PFDN5-216ENST00000552341 SLITRK1Q96PX8 696 aa11.42□□□□□ -0.58
PFDN5-216ENST00000552341 ERP44Q9BS26 406 aa11.42□□□□□ -0.58
PFDN5-216ENST00000552341 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.42□□□□□ -0.58
PFDN5-216ENST00000552341 NEUROG2Q9H2A3 272 aa11.42□□□□□ -0.58
PFDN5-216ENST00000552341 MTUS1Q9ULD2 1270 aa11.42□□□□□ -0.58
PFDN5-216ENST00000552341 HPCAL4Q9UM19 191 aa11.42□□□□□ -0.58
PFDN5-216ENST00000552341 TRIM17Q9Y577 477 aa11.42□□□□□ -0.58
PFDN5-216ENST00000552341 TSC2P49815 1807 aa11.42□□□□□ -0.58
PFDN5-216ENST00000552341 C3orf70A6NLC5 250 aaPredicted RBP11.41□□□□□ -0.58
PFDN5-216ENST00000552341 C9IYK1 514 aa11.41□□□□□ -0.58
PFDN5-216ENST00000552341 DAPK3O43293 454 aa11.41□□□□□ -0.58
PFDN5-216ENST00000552341 FLT3P36888 993 aa11.41□□□□□ -0.58
PFDN5-216ENST00000552341 FNTAP49354 379 aa11.41□□□□□ -0.58
PFDN5-216ENST00000552341 ZNF143P52747 638 aaPredicted RBP11.41□□□□□ -0.58
PFDN5-216ENST00000552341 BCAT1P54687 386 aa11.41□□□□□ -0.58
PFDN5-216ENST00000552341 BST2Q10589 180 aaKnown RBP11.41□□□□□ -0.58
PFDN5-216ENST00000552341 NNTQ13423 1086 aa11.41□□□□□ -0.58
PFDN5-216ENST00000552341 GPNMBQ14956 572 aa11.41□□□□□ -0.58
PFDN5-216ENST00000552341 ACAP1Q15027 740 aa11.41□□□□□ -0.58
PFDN5-216ENST00000552341 TAF5Q15542 800 aa11.41□□□□□ -0.58
PFDN5-216ENST00000552341 FAM102AQ5T9C2 384 aaPredicted RBP11.41□□□□□ -0.58
PFDN5-216ENST00000552341 MFSD7Q6UXD7 560 aa11.41□□□□□ -0.58
PFDN5-216ENST00000552341 JAMLQ86YT9 394 aa11.41□□□□□ -0.58
PFDN5-216ENST00000552341 SCUBE3Q8IX30 993 aa11.41□□□□□ -0.58
PFDN5-216ENST00000552341 RCOR2Q8IZ40 523 aa11.41□□□□□ -0.58
PFDN5-216ENST00000552341 FUKQ8N0W3 1084 aa11.41□□□□□ -0.58
PFDN5-216ENST00000552341 SLC2A14Q8TDB8 520 aa11.41□□□□□ -0.58
PFDN5-216ENST00000552341 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.41□□□□□ -0.58
PFDN5-216ENST00000552341 RAPGEF5Q92565 580 aa11.41□□□□□ -0.58
PFDN5-216ENST00000552341 TNIP3Q96KP6 325 aa11.41□□□□□ -0.58
PFDN5-216ENST00000552341 HNRNPABQ99729 332 aaKnown RBP11.41□□□□□ -0.58
PFDN5-216ENST00000552341 HEMGNQ9BXL5 484 aa11.41□□□□□ -0.58
PFDN5-216ENST00000552341 B3GNT5Q9BYG0 378 aa11.41□□□□□ -0.58
PFDN5-216ENST00000552341 OSBPL8Q9BZF1 889 aa11.41□□□□□ -0.58
PFDN5-216ENST00000552341 MIS12Q9H081 205 aa11.41□□□□□ -0.58
PFDN5-216ENST00000552341 UNC93B1Q9H1C4 597 aa11.41□□□□□ -0.58
PFDN5-216ENST00000552341 RGS18Q9NS28 235 aa11.41□□□□□ -0.58
PFDN5-216ENST00000552341 HESX1Q9UBX0 185 aa11.41□□□□□ -0.58
PFDN5-216ENST00000552341 R3HDM2Q9Y2K5 976 aaKnown RBP11.41□□□□□ -0.58
PFDN5-216ENST00000552341 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.41□□□□□ -0.58
PFDN5-216ENST00000552341 FAM187AA6NFU0 413 aa11.41□□□□□ -0.58
PFDN5-216ENST00000552341 CASTOR2A6NHX0 329 aa11.41□□□□□ -0.58
PFDN5-216ENST00000552341 PI4K2BG5E9Z4 385 aa11.41□□□□□ -0.58
PFDN5-216ENST00000552341 POMCP01189 267 aa11.41□□□□□ -0.58
PFDN5-216ENST00000552341 ADORA2BP29275 332 aa11.41□□□□□ -0.58
PFDN5-216ENST00000552341 PTPN7P35236 360 aa11.41□□□□□ -0.58
PFDN5-216ENST00000552341 GJC1P36383 396 aa11.41□□□□□ -0.58
PFDN5-216ENST00000552341 SSR1P43307 286 aaKnown RBP11.41□□□□□ -0.58
PFDN5-216ENST00000552341 KCNJ1P48048 391 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms