RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 SMIM28A0A1B0GU29 152 aa5.87□□□□□ -1.47
HOXB3-213ENST00000552000 ACKR2O00590 384 aa5.87□□□□□ -1.47
HOXB3-213ENST00000552000 TRDMT1O14717 391 aaKnown RBP5.87□□□□□ -1.47
HOXB3-213ENST00000552000 MEFVO15553 781 aaPredicted RBP5.87□□□□□ -1.47
HOXB3-213ENST00000552000 CCNT1O60563 726 aaKnown RBP5.87□□□□□ -1.47
HOXB3-213ENST00000552000 SLITRK3O94933 977 aa5.87□□□□□ -1.47
HOXB3-213ENST00000552000 LYPLA2O95372 231 aa5.87□□□□□ -1.47
HOXB3-213ENST00000552000 VNN2O95498 520 aa5.87□□□□□ -1.47
HOXB3-213ENST00000552000 APBB3O95704 486 aa5.87□□□□□ -1.47
HOXB3-213ENST00000552000 OR4Q2P0C623 313 aa5.87□□□□□ -1.47
HOXB3-213ENST00000552000 BCKDHBP21953 392 aa5.87□□□□□ -1.47
HOXB3-213ENST00000552000 U2AF2P26368 475 aaKnown RBP eCLIP5.87□□□□□ -1.472e-8■□□□□ 10
HOXB3-213ENST00000552000 MAPK8P45983 427 aa5.87□□□□□ -1.47
HOXB3-213ENST00000552000 DHPSP49366 369 aaPredicted RBP5.87□□□□□ -1.47
HOXB3-213ENST00000552000 RARRES1P49788 294 aa5.87□□□□□ -1.47
HOXB3-213ENST00000552000 DGKEP52429 567 aa5.87□□□□□ -1.47
HOXB3-213ENST00000552000 EPHB3P54753 998 aa5.87□□□□□ -1.47
HOXB3-213ENST00000552000 CYP4F8P98187 520 aa5.87□□□□□ -1.47
HOXB3-213ENST00000552000 SCAPQ12770 1279 aa5.87□□□□□ -1.47
HOXB3-213ENST00000552000 KRT32Q14532 448 aa5.87□□□□□ -1.47
HOXB3-213ENST00000552000 KARSQ15046 597 aaKnown RBP5.87□□□□□ -1.47
HOXB3-213ENST00000552000 NPY5RQ15761 445 aa5.87□□□□□ -1.47
HOXB3-213ENST00000552000 MAPK6Q16659 721 aa5.87□□□□□ -1.47
HOXB3-213ENST00000552000 DCAF4L1Q3SXM0 396 aa5.87□□□□□ -1.47
HOXB3-213ENST00000552000 ARHGAP15Q53QZ3 475 aa5.87□□□□□ -1.47
HOXB3-213ENST00000552000 ARSJQ5FYB0 599 aaPredicted RBP5.87□□□□□ -1.47
HOXB3-213ENST00000552000 PMS2CLQ68D20 193 aa5.87□□□□□ -1.47
HOXB3-213ENST00000552000 CDCA2Q69YH5 1023 aaPredicted RBP5.87□□□□□ -1.47
HOXB3-213ENST00000552000 NAIF1Q69YI7 327 aaPredicted RBP5.87□□□□□ -1.47
HOXB3-213ENST00000552000 GAREM2Q75VX8 874 aa5.87□□□□□ -1.47
HOXB3-213ENST00000552000 KRT25Q7Z3Z0 450 aa5.87□□□□□ -1.47
HOXB3-213ENST00000552000 NEK8Q86SG6 692 aa5.87□□□□□ -1.47
HOXB3-213ENST00000552000 DAGLBQ8NCG7 672 aa5.87□□□□□ -1.47
HOXB3-213ENST00000552000 APPL2Q8NEU8 664 aa5.87□□□□□ -1.47
HOXB3-213ENST00000552000 BPIFB1Q8TDL5 484 aa5.87□□□□□ -1.47
HOXB3-213ENST00000552000 PIGOQ8TEQ8 1089 aa5.87□□□□□ -1.47
HOXB3-213ENST00000552000 BSNDQ8WZ55 320 aa5.87□□□□□ -1.47
HOXB3-213ENST00000552000 PIGKQ92643 395 aa5.87□□□□□ -1.47
HOXB3-213ENST00000552000 AIFM3Q96NN9 605 aa5.87□□□□□ -1.47
HOXB3-213ENST00000552000 PGLYRP2Q96PD5 576 aa5.87□□□□□ -1.47
HOXB3-213ENST00000552000 TPSD1Q9BZJ3 242 aa5.87□□□□□ -1.47
HOXB3-213ENST00000552000 SMG9Q9H0W8 520 aaKnown RBP5.87□□□□□ -1.47
HOXB3-213ENST00000552000 DNAJC25Q9H1X3 360 aa5.87□□□□□ -1.47
HOXB3-213ENST00000552000 ATXN3LQ9H3M9 355 aa5.87□□□□□ -1.47
HOXB3-213ENST00000552000 HPS4Q9NQG7 708 aa5.87□□□□□ -1.47
HOXB3-213ENST00000552000 GKN1Q9NS71 199 aa5.87□□□□□ -1.47
HOXB3-213ENST00000552000 ANKEF1Q9NU02 776 aa5.87□□□□□ -1.47
HOXB3-213ENST00000552000 OBP2AQ9NY56 170 aa5.87□□□□□ -1.47
HOXB3-213ENST00000552000 ANKFY1Q9P2R3 1169 aa5.87□□□□□ -1.47
HOXB3-213ENST00000552000 NID2Q14112 1375 aa5.87□□□□□ -1.47
HOXB3-213ENST00000552000 KIAA1549LQ6ZVL6 1849 aa5.87□□□□□ -1.47
HOXB3-213ENST00000552000 NUMA1Q14980 2115 aa5.87□□□□□ -1.47
HOXB3-213ENST00000552000 MYH11P35749 1972 aa5.86□□□□□ -1.47
HOXB3-213ENST00000552000 TNRC6BQ9UPQ9 1833 aaKnown RBP5.86□□□□□ -1.47
HOXB3-213ENST00000552000 ELOA3CA0A087WX78 387 aaPredicted RBP5.86□□□□□ -1.47
HOXB3-213ENST00000552000 CCDC194A0A1B0GVG4 234 aa5.86□□□□□ -1.47
HOXB3-213ENST00000552000 OTOL1A6NHN0 477 aaPredicted RBP5.86□□□□□ -1.47
HOXB3-213ENST00000552000 ELOA3DA6NLF2 546 aaPredicted RBP5.86□□□□□ -1.47
HOXB3-213ENST00000552000 SOAT2O75908 522 aa5.86□□□□□ -1.47
HOXB3-213ENST00000552000 BAG4O95429 457 aaKnown RBP5.86□□□□□ -1.47
HOXB3-213ENST00000552000 CAPNS1P04632 268 aa5.86□□□□□ -1.47
HOXB3-213ENST00000552000 HMGB1P09429 215 aaKnown RBP5.86□□□□□ -1.47
HOXB3-213ENST00000552000 GCFC2P16383 781 aaKnown RBP5.86□□□□□ -1.47
HOXB3-213ENST00000552000 GABRR2P28476 465 aa5.86□□□□□ -1.47
HOXB3-213ENST00000552000 MCM4P33991 863 aa5.86□□□□□ -1.47
HOXB3-213ENST00000552000 MCM2P49736 904 aa5.86□□□□□ -1.47
HOXB3-213ENST00000552000 OSTNP61366 133 aa5.86□□□□□ -1.47
HOXB3-213ENST00000552000 FAM193AP78312 1265 aa5.86□□□□□ -1.47
HOXB3-213ENST00000552000 TNP2Q05952 138 aa5.86□□□□□ -1.47
HOXB3-213ENST00000552000 SSRP1Q08945 709 aaKnown RBP5.86□□□□□ -1.47
HOXB3-213ENST00000552000 DUSP4Q13115 394 aa5.86□□□□□ -1.47
HOXB3-213ENST00000552000 PSMD2Q13200 908 aa5.86□□□□□ -1.47
HOXB3-213ENST00000552000 PLD1Q13393 1074 aa5.86□□□□□ -1.47
HOXB3-213ENST00000552000 DMC1Q14565 340 aa5.86□□□□□ -1.47
HOXB3-213ENST00000552000 PTPAQ15257 358 aa5.86□□□□□ -1.47
HOXB3-213ENST00000552000 TSGA10IPQ3SY00 556 aa5.86□□□□□ -1.47
HOXB3-213ENST00000552000 ELOA3BQ3SY89 546 aa5.86□□□□□ -1.47
HOXB3-213ENST00000552000 USP39Q53GS9 565 aaKnown RBP5.86□□□□□ -1.47
HOXB3-213ENST00000552000 TRIM61Q5EBN2 209 aa5.86□□□□□ -1.47
HOXB3-213ENST00000552000 NT5DC1Q5TFE4 455 aa5.86□□□□□ -1.47
HOXB3-213ENST00000552000 TRIM68Q6AZZ1 485 aa5.86□□□□□ -1.47
HOXB3-213ENST00000552000 ARMCX6Q7L4S7 300 aa5.86□□□□□ -1.47
HOXB3-213ENST00000552000 PIP4P1Q86T03 277 aa5.86□□□□□ -1.47
HOXB3-213ENST00000552000 SLFN12Q8IYM2 578 aa5.86□□□□□ -1.47
HOXB3-213ENST00000552000 CEP120Q8N960 986 aa5.86□□□□□ -1.47
HOXB3-213ENST00000552000 TSTD1Q8NFU3 115 aa5.86□□□□□ -1.47
HOXB3-213ENST00000552000 ELOA3Q8NG57 546 aa5.86□□□□□ -1.47
HOXB3-213ENST00000552000 RPLP0P6Q8NHW5 317 aa5.86□□□□□ -1.47
HOXB3-213ENST00000552000 DEPTORQ8TB45 409 aa5.86□□□□□ -1.47
HOXB3-213ENST00000552000 HNRNPLLQ8WVV9 542 aaKnown RBP5.86□□□□□ -1.47
HOXB3-213ENST00000552000 C18orf25Q96B23 403 aaPredicted RBP5.86□□□□□ -1.47
HOXB3-213ENST00000552000 CHFRQ96EP1 664 aa5.86□□□□□ -1.47
HOXB3-213ENST00000552000 POM121Q96HA1 1249 aa5.86□□□□□ -1.47
HOXB3-213ENST00000552000 SUSD3Q96L08 255 aa5.86□□□□□ -1.47
HOXB3-213ENST00000552000 JAKMIP1Q96N16 626 aaKnown RBP5.86□□□□□ -1.47
HOXB3-213ENST00000552000 ZMAT2Q96NC0 199 aaKnown RBP5.86□□□□□ -1.47
HOXB3-213ENST00000552000 TBC1D32Q96NH3 1257 aa5.86□□□□□ -1.47
HOXB3-213ENST00000552000 HSD17B14Q9BPX1 270 aa5.86□□□□□ -1.47
HOXB3-213ENST00000552000 FAM83CQ9BQN1 747 aa5.86□□□□□ -1.47
HOXB3-213ENST00000552000 KIFC3Q9BVG8 833 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms