RNA–Protein interactions for RNA: ENST00000551989.1

CCNT1-204, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 726 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-204ENST00000551989 SH3BGRP55822 239 aaPredicted RBP5.64□□□□□ -1.51
CCNT1-204ENST00000551989 SNX16P57768 344 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 TAS2R40P59535 323 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 ACTR2P61160 394 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 MRPS35P82673 323 aaKnown RBP5.64□□□□□ -1.51
CCNT1-204ENST00000551989 MYO1EQ12965 1108 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 GPS1Q13098 491 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 IRF5Q13568 498 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 NCOA4Q13772 614 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 TFDP2Q14188 446 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 MXD4Q14582 209 aaPredicted RBP5.64□□□□□ -1.51
CCNT1-204ENST00000551989 KRT72Q14CN4 511 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 LRRC14Q15048 493 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 STILQ15468 1287 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 ZYXQ15942 572 aaKnown RBP5.64□□□□□ -1.51
CCNT1-204ENST00000551989 MSS51Q4VC12 460 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 CDCA2Q69YH5 1023 aaPredicted RBP5.64□□□□□ -1.51
CCNT1-204ENST00000551989 TMEM270Q6UE05 265 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 SLC30A10Q6XR72 485 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 TAS1R3Q7RTX0 852 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 ERICH1Q86X53 443 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 ECHDC2Q86YB7 292 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 ZBTB8OSQ8IWT0 167 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 PDIK1LQ8N165 341 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 GPATCH11Q8N954 259 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 REPS2Q8NFH8 660 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 UHMK1Q8TAS1 419 aaKnown RBP5.64□□□□□ -1.51
CCNT1-204ENST00000551989 MGARPQ8TDB4 240 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 AGAP11Q8TF27 550 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 PYROXD1Q8WU10 500 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 NSMCE1Q8WV22 266 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 C10orf82Q8WW14 230 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 ZNF606Q8WXB4 792 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 CPA5Q8WXQ8 436 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 ATG4AQ8WYN0 398 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 BSNDQ8WZ55 320 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 PRCCQ92733 491 aaPredicted RBP5.64□□□□□ -1.51
CCNT1-204ENST00000551989 USP6NLQ92738 828 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 MTBPQ96DY7 904 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 C9orf72Q96LT7 481 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 CYTH2Q99418 400 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 MSTO1Q9BUK6 570 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 TEX13BQ9BXU2 312 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 MRPL4Q9BYD3 311 aaKnown RBP5.64□□□□□ -1.51
CCNT1-204ENST00000551989 TRIM55Q9BYV6 548 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 STN1Q9H668 368 aaKnown RBP5.64□□□□□ -1.51
CCNT1-204ENST00000551989 RPAP3Q9H6T3 665 aaPredicted RBP5.64□□□□□ -1.51
CCNT1-204ENST00000551989 DCLRE1BQ9H816 532 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 VPS37BQ9H9H4 285 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 RSAD1Q9HA92 442 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 IFT122Q9HBG6 1241 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 ETNK1Q9HBU6 452 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 LRRC4CQ9HCJ2 640 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 RAVER2Q9HCJ3 691 aaKnown RBP5.64□□□□□ -1.51
CCNT1-204ENST00000551989 CYLDQ9NQC7 956 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 ZNF302Q9NR11 478 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 TOPORSQ9NS56 1045 aaPredicted RBP5.64□□□□□ -1.51
CCNT1-204ENST00000551989 NRBP2Q9NSY0 501 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 CYP39A1Q9NYL5 469 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 STOML1Q9UBI4 398 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 ZNF180Q9UJW8 692 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 ZMYND8Q9ULU4 1186 aaPredicted RBP5.64□□□□□ -1.51
CCNT1-204ENST00000551989 AGAP1Q9UPQ3 857 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 SORCS3Q9UPU3 1222 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 R3HDM2Q9Y2K5 976 aaKnown RBP5.64□□□□□ -1.51
CCNT1-204ENST00000551989 MTO1Q9Y2Z2 717 aaKnown RBP5.64□□□□□ -1.51
CCNT1-204ENST00000551989 PPP2R3BQ9Y5P8 575 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 MAFBQ9Y5Q3 323 aaPredicted RBP5.64□□□□□ -1.51
CCNT1-204ENST00000551989 SNCAIPQ9Y6H5 919 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 CNTNAP2Q9UHC6 1331 aa5.64□□□□□ -1.51
CCNT1-204ENST00000551989 A8MXQ7 604 aa5.63□□□□□ -1.51
CCNT1-204ENST00000551989 SGK1O00141 431 aa5.63□□□□□ -1.51
CCNT1-204ENST00000551989 WNT10BO00744 389 aa5.63□□□□□ -1.51
CCNT1-204ENST00000551989 TRDMT1O14717 391 aaKnown RBP5.63□□□□□ -1.51
CCNT1-204ENST00000551989 MCF2LO15068 1137 aa5.63□□□□□ -1.51
CCNT1-204ENST00000551989 AXIN1O15169 862 aa5.63□□□□□ -1.51
CCNT1-204ENST00000551989 OGTO15294 1046 aa5.63□□□□□ -1.51
CCNT1-204ENST00000551989 B4GALT4O60513 344 aa5.63□□□□□ -1.51
CCNT1-204ENST00000551989 ATP9AO75110 1047 aa5.63□□□□□ -1.51
CCNT1-204ENST00000551989 RNF8O76064 485 aa5.63□□□□□ -1.51
CCNT1-204ENST00000551989 STAU1O95793 577 aaKnown RBP5.63□□□□□ -1.51
CCNT1-204ENST00000551989 TNNC2P02585 160 aa5.63□□□□□ -1.51
CCNT1-204ENST00000551989 KRT16P08779 473 aa5.63□□□□□ -1.51
CCNT1-204ENST00000551989 TGFB3P10600 412 aa5.63□□□□□ -1.51
CCNT1-204ENST00000551989 NEFHP12036 1026 aa5.63□□□□□ -1.51
CCNT1-204ENST00000551989 P4HA1P13674 534 aa5.63□□□□□ -1.51
CCNT1-204ENST00000551989 PECAM1P16284 738 aaPredicted RBP5.63□□□□□ -1.51
CCNT1-204ENST00000551989 ATF7P17544 494 aaPredicted RBP5.63□□□□□ -1.51
CCNT1-204ENST00000551989 CD58P19256 250 aa5.63□□□□□ -1.51
CCNT1-204ENST00000551989 CNTFP26441 200 aa5.63□□□□□ -1.51
CCNT1-204ENST00000551989 MARK3P27448 753 aa5.63□□□□□ -1.51
CCNT1-204ENST00000551989 GCAP28676 217 aa5.63□□□□□ -1.51
CCNT1-204ENST00000551989 ATICP31939 592 aa5.63□□□□□ -1.51
CCNT1-204ENST00000551989 SSR1P43307 286 aaKnown RBP5.63□□□□□ -1.51
CCNT1-204ENST00000551989 SLC26A2P50443 739 aa5.63□□□□□ -1.51
CCNT1-204ENST00000551989 BACE1P56817 501 aa5.63□□□□□ -1.51
CCNT1-204ENST00000551989 WDR4P57081 412 aaKnown RBP5.63□□□□□ -1.51
CCNT1-204ENST00000551989 ZNF280AP59817 542 aaPredicted RBP5.63□□□□□ -1.51
CCNT1-204ENST00000551989 TGFB2P61812 414 aa5.63□□□□□ -1.51
CCNT1-204ENST00000551989 KCNJ2P63252 427 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms