RNA–Protein interactions for RNA: ENST00000551497.1

SMARCD1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 4

Gene SMARCD1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-211ENST00000551497 SLC5A9Q2M3M2 681 aa16.1■□□□□ 0.17
SMARCD1-211ENST00000551497 PABPC1LQ4VXU2 614 aaKnown RBP16.1■□□□□ 0.17
SMARCD1-211ENST00000551497 FKBP15Q5T1M5 1219 aa16.1■□□□□ 0.17
SMARCD1-211ENST00000551497 PPP1R26Q5T8A7 1209 aaPredicted RBP16.1■□□□□ 0.17
SMARCD1-211ENST00000551497 KLHDC7AQ5VTJ3 777 aa16.1■□□□□ 0.17
SMARCD1-211ENST00000551497 POTEHQ6S545 545 aa16.1■□□□□ 0.17
SMARCD1-211ENST00000551497 VSTM1Q6UX27 236 aa16.1■□□□□ 0.17
SMARCD1-211ENST00000551497 FAM35AQ86V20 835 aa16.1■□□□□ 0.17
SMARCD1-211ENST00000551497 ELMOD1Q8N336 334 aa16.1■□□□□ 0.17
SMARCD1-211ENST00000551497 TFAP2BQ92481 460 aa16.1■□□□□ 0.17
SMARCD1-211ENST00000551497 PSMG2Q969U7 264 aa16.1■□□□□ 0.17
SMARCD1-211ENST00000551497 TCEAL4Q96EI5 215 aa16.1■□□□□ 0.17
SMARCD1-211ENST00000551497 HNRNPABQ99729 332 aaKnown RBP16.1■□□□□ 0.17
SMARCD1-211ENST00000551497 FAM124BQ9H5Z6 455 aaPredicted RBP16.1■□□□□ 0.17
SMARCD1-211ENST00000551497 CLUHO75153 1309 aa16.1■□□□□ 0.17
SMARCD1-211ENST00000551497 PTPRDP23468 1912 aa16.09■□□□□ 0.17
SMARCD1-211ENST00000551497 SLC38A8A6NNN8 435 aa16.09■□□□□ 0.17
SMARCD1-211ENST00000551497 AP1G2O75843 785 aa16.09■□□□□ 0.17
SMARCD1-211ENST00000551497 KRT5P13647 590 aa16.09■□□□□ 0.17
SMARCD1-211ENST00000551497 CD19P15391 556 aa16.09■□□□□ 0.17
SMARCD1-211ENST00000551497 HMGA1P17096 107 aaKnown RBP16.09■□□□□ 0.17
SMARCD1-211ENST00000551497 ZP2Q05996 745 aa16.09■□□□□ 0.17
SMARCD1-211ENST00000551497 VEPH1Q14D04 833 aa16.09■□□□□ 0.17
SMARCD1-211ENST00000551497 SYCP1Q15431 976 aa16.09■□□□□ 0.17
SMARCD1-211ENST00000551497 CYP4A22Q5TCH4 519 aa16.09■□□□□ 0.17
SMARCD1-211ENST00000551497 TMC8Q8IU68 726 aa16.09■□□□□ 0.17
SMARCD1-211ENST00000551497 ADHFE1Q8IWW8 467 aa16.09■□□□□ 0.17
SMARCD1-211ENST00000551497 RBBP8NLQ8NC74 664 aaPredicted RBP16.09■□□□□ 0.17
SMARCD1-211ENST00000551497 RNF214Q8ND24 703 aa16.09■□□□□ 0.17
SMARCD1-211ENST00000551497 ZMIZ2Q8NF64 920 aa16.09■□□□□ 0.17
SMARCD1-211ENST00000551497 ADAMTS19Q8TE59 1207 aa16.09■□□□□ 0.17
SMARCD1-211ENST00000551497 ING5Q8WYH8 240 aa16.09■□□□□ 0.17
SMARCD1-211ENST00000551497 MYADMQ96S97 322 aa16.09■□□□□ 0.17
SMARCD1-211ENST00000551497 SMOQ99835 787 aa16.09■□□□□ 0.17
SMARCD1-211ENST00000551497 ZSWIM1Q9BR11 485 aa16.09■□□□□ 0.17
SMARCD1-211ENST00000551497 CD320Q9NPF0 282 aa16.09■□□□□ 0.17
SMARCD1-211ENST00000551497 RTN4Q9NQC3 1192 aaKnown RBP16.09■□□□□ 0.17
SMARCD1-211ENST00000551497 KRT82Q9NSB4 513 aa16.09■□□□□ 0.17
SMARCD1-211ENST00000551497 MAGED2Q9UNF1 606 aaPredicted RBP16.09■□□□□ 0.17
SMARCD1-211ENST00000551497 CNTN6Q9UQ52 1028 aa16.09■□□□□ 0.17
SMARCD1-211ENST00000551497 SIK3Q9Y2K2 1263 aa16.09■□□□□ 0.17
SMARCD1-211ENST00000551497 ASB3Q9Y575 518 aa16.09■□□□□ 0.17
SMARCD1-211ENST00000551497 XIRP2A4UGR9 3374 aa16.08■□□□□ 0.17
SMARCD1-211ENST00000551497 GOLGA6L19H0YKK7 550 aa16.08■□□□□ 0.16
SMARCD1-211ENST00000551497 FOXN3O00409 490 aaPredicted RBP16.08■□□□□ 0.16
SMARCD1-211ENST00000551497 EPHB6O15197 1021 aa16.08■□□□□ 0.16
SMARCD1-211ENST00000551497 MOSPD3O75425 235 aa16.08■□□□□ 0.16
SMARCD1-211ENST00000551497 NOL4O94818 638 aa16.08■□□□□ 0.16
SMARCD1-211ENST00000551497 USP8P40818 1118 aa16.08■□□□□ 0.16
SMARCD1-211ENST00000551497 USP46P62068 366 aa16.08■□□□□ 0.16
SMARCD1-211ENST00000551497 TAF12Q16514 161 aa16.08■□□□□ 0.16
SMARCD1-211ENST00000551497 PRSS36Q5K4E3 855 aa16.08■□□□□ 0.16
SMARCD1-211ENST00000551497 GET4Q7L5D6 327 aaPredicted RBP16.08■□□□□ 0.16
SMARCD1-211ENST00000551497 ENOSF1Q7L5Y1 443 aa16.08■□□□□ 0.16
SMARCD1-211ENST00000551497 ITIH5Q86UX2 942 aa16.08■□□□□ 0.16
SMARCD1-211ENST00000551497 ST13P5Q8NFI4 369 aaPredicted RBP16.08■□□□□ 0.16
SMARCD1-211ENST00000551497 JAKMIP2Q96AA8 810 aa16.08■□□□□ 0.16
SMARCD1-211ENST00000551497 C8orf48Q96LL4 319 aa16.08■□□□□ 0.16
SMARCD1-211ENST00000551497 ACP6Q9NPH0 428 aa16.08■□□□□ 0.16
SMARCD1-211ENST00000551497 MRPS23Q9Y3D9 190 aaKnown RBP16.08■□□□□ 0.16
SMARCD1-211ENST00000551497 FHOD1Q9Y613 1164 aa16.08■□□□□ 0.16
SMARCD1-211ENST00000551497 MYH10P35580 1976 aa16.07■□□□□ 0.16
SMARCD1-211ENST00000551497 C5orf42Q9H799 3197 aa16.07■□□□□ 0.16
SMARCD1-211ENST00000551497 C2CD4DB7Z1M9 353 aa16.07■□□□□ 0.16
SMARCD1-211ENST00000551497 LOC730098B7Z3J9 87 aa16.07■□□□□ 0.16
SMARCD1-211ENST00000551497 TRIM66O15016 1216 aa16.07■□□□□ 0.16
SMARCD1-211ENST00000551497 SERPINC1P01008 464 aa16.07■□□□□ 0.16
SMARCD1-211ENST00000551497 PAEPP09466 180 aa16.07■□□□□ 0.16
SMARCD1-211ENST00000551497 PNMA6AP0CW24 399 aaPredicted RBP16.07■□□□□ 0.16
SMARCD1-211ENST00000551497 VDRP11473 427 aa16.07■□□□□ 0.16
SMARCD1-211ENST00000551497 UCHL3P15374 230 aa16.07■□□□□ 0.16
SMARCD1-211ENST00000551497 ANXA13P27216 316 aa16.07■□□□□ 0.16
SMARCD1-211ENST00000551497 GBP2P32456 591 aaPredicted RBP16.07■□□□□ 0.16
SMARCD1-211ENST00000551497 SSTR3P32745 418 aaPredicted RBP16.07■□□□□ 0.16
SMARCD1-211ENST00000551497 ZNF132P52740 706 aa16.07■□□□□ 0.16
SMARCD1-211ENST00000551497 EPHA5P54756 1037 aa16.07■□□□□ 0.16
SMARCD1-211ENST00000551497 MAP3K7CLP57077 242 aa16.07■□□□□ 0.16
SMARCD1-211ENST00000551497 TPM4P67936 248 aa16.07■□□□□ 0.16
SMARCD1-211ENST00000551497 FANCCQ00597 558 aa16.07■□□□□ 0.16
SMARCD1-211ENST00000551497 ARHGAP17Q68EM7 881 aa16.07■□□□□ 0.16
SMARCD1-211ENST00000551497 GAREM2Q75VX8 874 aa16.07■□□□□ 0.16
SMARCD1-211ENST00000551497 PDZD4Q76G19 769 aaPredicted RBP16.07■□□□□ 0.16
SMARCD1-211ENST00000551497 SHKBP1Q8TBC3 707 aa16.07■□□□□ 0.16
SMARCD1-211ENST00000551497 SHC3Q92529 594 aa16.07■□□□□ 0.16
SMARCD1-211ENST00000551497 FGF13Q92913 245 aa16.07■□□□□ 0.16
SMARCD1-211ENST00000551497 MCRS1Q96EZ8 462 aa16.07■□□□□ 0.16
SMARCD1-211ENST00000551497 SMARCD1Q96GM5 515 aa16.07■□□□□ 0.16
SMARCD1-211ENST00000551497 SPATA17Q96L03 361 aa16.07■□□□□ 0.16
SMARCD1-211ENST00000551497 PCMTD1Q96MG8 357 aaPredicted RBP16.07■□□□□ 0.16
SMARCD1-211ENST00000551497 NAA15Q9BXJ9 866 aaKnown RBP16.07■□□□□ 0.16
SMARCD1-211ENST00000551497 GPR88Q9GZN0 384 aa16.07■□□□□ 0.16
SMARCD1-211ENST00000551497 DNAI2Q9GZS0 605 aa16.07■□□□□ 0.16
SMARCD1-211ENST00000551497 GANQ9H2C0 597 aa16.07■□□□□ 0.16
SMARCD1-211ENST00000551497 IL21Q9HBE4 155 aa16.07■□□□□ 0.16
SMARCD1-211ENST00000551497 PLCB1Q9NQ66 1216 aa16.07■□□□□ 0.16
SMARCD1-211ENST00000551497 AVENQ9NQS1 362 aaPredicted RBP16.07■□□□□ 0.16
SMARCD1-211ENST00000551497 ASAH2Q9NR71 780 aa16.07■□□□□ 0.16
SMARCD1-211ENST00000551497 FAM207AQ9NSI2 230 aaPredicted RBP16.07■□□□□ 0.16
SMARCD1-211ENST00000551497 PRKAG3Q9UGI9 489 aa16.07■□□□□ 0.16
SMARCD1-211ENST00000551497 ATP8B3O60423 1300 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms