RNA–Protein interactions for RNA: ENST00000550880.5

PFDN5-212, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-212ENST00000550880 EZH1Q92800 747 aaPredicted RBP11.9□□□□□ -0.5
PFDN5-212ENST00000550880 AK8Q96MA6 479 aa11.9□□□□□ -0.5
PFDN5-212ENST00000550880 TMLHEQ9NVH6 421 aa11.9□□□□□ -0.5
PFDN5-212ENST00000550880 DDX43Q9NXZ2 648 aaKnown RBP11.9□□□□□ -0.5
PFDN5-212ENST00000550880 EHD2Q9NZN4 543 aa11.9□□□□□ -0.5
PFDN5-212ENST00000550880 MSRB2Q9Y3D2 182 aa11.9□□□□□ -0.5
PFDN5-212ENST00000550880 R3HCC1Q9Y3T6 440 aaKnown RBP11.9□□□□□ -0.5
PFDN5-212ENST00000550880 K7EQS6 105 aa11.89□□□□□ -0.51
PFDN5-212ENST00000550880 HYAL3O43820 417 aaPredicted RBP11.89□□□□□ -0.51
PFDN5-212ENST00000550880 TCF3P15923 654 aa11.89□□□□□ -0.51
PFDN5-212ENST00000550880 ENGP17813 658 aa11.89□□□□□ -0.51
PFDN5-212ENST00000550880 PFKLP17858 780 aa11.89□□□□□ -0.51
PFDN5-212ENST00000550880 PCSK1P29120 753 aa11.89□□□□□ -0.51
PFDN5-212ENST00000550880 UBA7P41226 1012 aa11.89□□□□□ -0.51
PFDN5-212ENST00000550880 LHX1P48742 406 aa11.89□□□□□ -0.51
PFDN5-212ENST00000550880 ZNF131P52739 623 aa11.89□□□□□ -0.51
PFDN5-212ENST00000550880 SIM1P81133 766 aaPredicted RBP11.89□□□□□ -0.51
PFDN5-212ENST00000550880 GTF2BQ00403 316 aa11.89□□□□□ -0.51
PFDN5-212ENST00000550880 TMEM119Q4V9L6 283 aa11.89□□□□□ -0.51
PFDN5-212ENST00000550880 INTS6LQ5JSJ4 861 aaKnown RBP11.89□□□□□ -0.51
PFDN5-212ENST00000550880 EOGTQ5NDL2 527 aa11.89□□□□□ -0.51
PFDN5-212ENST00000550880 LYSMD4Q5XG99 296 aa11.89□□□□□ -0.51
PFDN5-212ENST00000550880 ARL6IP4Q66PJ3 421 aaKnown RBP11.89□□□□□ -0.51
PFDN5-212ENST00000550880 SLC39A4Q6P5W5 647 aa11.89□□□□□ -0.51
PFDN5-212ENST00000550880 RABEPKQ7Z6M1 372 aa11.89□□□□□ -0.51
PFDN5-212ENST00000550880 SCN4BQ8IWT1 228 aa11.89□□□□□ -0.51
PFDN5-212ENST00000550880 PGBD3Q8N328 593 aa11.89□□□□□ -0.51
PFDN5-212ENST00000550880 PDCL2Q8N4E4 241 aa11.89□□□□□ -0.51
PFDN5-212ENST00000550880 STKLD1Q8NE28 680 aa11.89□□□□□ -0.51
PFDN5-212ENST00000550880 CEP76Q8TAP6 659 aa11.89□□□□□ -0.51
PFDN5-212ENST00000550880 SPATA18Q8TC71 538 aa11.89□□□□□ -0.51
PFDN5-212ENST00000550880 POMGNT1Q8WZA1 660 aa11.89□□□□□ -0.51
PFDN5-212ENST00000550880 FUBP3Q96I24 572 aaKnown RBP eCLIP11.89□□□□□ -0.51
PFDN5-212ENST00000550880 SLC22A12Q96S37 553 aa11.89□□□□□ -0.51
PFDN5-212ENST00000550880 LINC00597Q9H2U6 94 aa11.89□□□□□ -0.51
PFDN5-212ENST00000550880 ARHGAP26Q9UNA1 814 aa11.89□□□□□ -0.51
PFDN5-212ENST00000550880 MYH11P35749 1972 aa11.88□□□□□ -0.51
PFDN5-212ENST00000550880 EML5Q05BV3 1969 aa11.88□□□□□ -0.51
PFDN5-212ENST00000550880 ZNF638Q14966 1978 aaKnown RBP11.88□□□□□ -0.51
PFDN5-212ENST00000550880 ASPMQ8IZT6 3477 aa11.88□□□□□ -0.51
PFDN5-212ENST00000550880 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.88□□□□□ -0.51
PFDN5-212ENST00000550880 UPK3BL1B0FP48 263 aa11.88□□□□□ -0.51
PFDN5-212ENST00000550880 ANKRD63C9JTQ0 380 aa11.88□□□□□ -0.51
PFDN5-212ENST00000550880 UPK3BL2E5RIL1 263 aa11.88□□□□□ -0.51
PFDN5-212ENST00000550880 SLC9A3R1O14745 358 aaPredicted RBP11.88□□□□□ -0.51
PFDN5-212ENST00000550880 TADA3O75528 432 aa11.88□□□□□ -0.51
PFDN5-212ENST00000550880 APODP05090 189 aa11.88□□□□□ -0.51
PFDN5-212ENST00000550880 CFIP05156 583 aa11.88□□□□□ -0.51
PFDN5-212ENST00000550880 HOXD12P35452 270 aa11.88□□□□□ -0.51
PFDN5-212ENST00000550880 OPRD1P41143 372 aa11.88□□□□□ -0.51
PFDN5-212ENST00000550880 P2RY2P41231 377 aa11.88□□□□□ -0.51
PFDN5-212ENST00000550880 TFAMQ00059 246 aaKnown RBP11.88□□□□□ -0.51
PFDN5-212ENST00000550880 GFPT1Q06210 699 aaPredicted RBP11.88□□□□□ -0.51
PFDN5-212ENST00000550880 HNRNPDQ14103 355 aaKnown RBP11.88□□□□□ -0.51
PFDN5-212ENST00000550880 CFAP221Q4G0U5 840 aa11.88□□□□□ -0.51
PFDN5-212ENST00000550880 SLC23A3Q6PIS1 610 aa11.88□□□□□ -0.51
PFDN5-212ENST00000550880 C4orf50Q6ZRC1 276 aa11.88□□□□□ -0.51
PFDN5-212ENST00000550880 ARMCX6Q7L4S7 300 aa11.88□□□□□ -0.51
PFDN5-212ENST00000550880 TMEFF1Q8IYR6 380 aa11.88□□□□□ -0.51
PFDN5-212ENST00000550880 KIAA1958Q8N8K9 716 aa11.88□□□□□ -0.51
PFDN5-212ENST00000550880 OLIG1Q8TAK6 271 aa11.88□□□□□ -0.51
PFDN5-212ENST00000550880 PNKPQ96T60 521 aa11.88□□□□□ -0.51
PFDN5-212ENST00000550880 TRPM5Q9NZQ8 1165 aa11.88□□□□□ -0.51
PFDN5-212ENST00000550880 GCNT4Q9P109 453 aa11.88□□□□□ -0.51
PFDN5-212ENST00000550880 GTF3C4Q9UKN8 822 aa11.88□□□□□ -0.51
PFDN5-212ENST00000550880 AGAP1Q9UPQ3 857 aa11.88□□□□□ -0.51
PFDN5-212ENST00000550880 STYXL1Q9Y6J8 313 aa11.88□□□□□ -0.51
PFDN5-212ENST00000550880 LAMA1P25391 3075 aa11.88□□□□□ -0.51
PFDN5-212ENST00000550880 SPAARA0A1B0GVQ0 90 aa11.87□□□□□ -0.51
PFDN5-212ENST00000550880 C2orf78A6NCI8 922 aa11.87□□□□□ -0.51
PFDN5-212ENST00000550880 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.87□□□□□ -0.51
PFDN5-212ENST00000550880 ZBTB24O43167 697 aaPredicted RBP11.87□□□□□ -0.51
PFDN5-212ENST00000550880 AP5Z1O43299 807 aa11.87□□□□□ -0.51
PFDN5-212ENST00000550880 OPHN1O60890 802 aa11.87□□□□□ -0.51
PFDN5-212ENST00000550880 KLF8O95600 359 aaPredicted RBP11.87□□□□□ -0.51
PFDN5-212ENST00000550880 ITGB3P05106 788 aa11.87□□□□□ -0.51
PFDN5-212ENST00000550880 ACAT1P24752 427 aaKnown RBP11.87□□□□□ -0.51
PFDN5-212ENST00000550880 ANXA13P27216 316 aa11.87□□□□□ -0.51
PFDN5-212ENST00000550880 POLR2BP30876 1174 aaKnown RBP11.87□□□□□ -0.51
PFDN5-212ENST00000550880 TIE1P35590 1138 aa11.87□□□□□ -0.51
PFDN5-212ENST00000550880 PPP3CCP48454 512 aa11.87□□□□□ -0.51
PFDN5-212ENST00000550880 MAPRE1Q15691 268 aaKnown RBP11.87□□□□□ -0.51
PFDN5-212ENST00000550880 DUOXA1Q1HG43 343 aa11.87□□□□□ -0.51
PFDN5-212ENST00000550880 ZNF423Q2M1K9 1284 aa11.87□□□□□ -0.51
PFDN5-212ENST00000550880 PREPLQ4J6C6 727 aaPredicted RBP11.87□□□□□ -0.51
PFDN5-212ENST00000550880 ALLCQ8N6M5 410 aa11.87□□□□□ -0.51
PFDN5-212ENST00000550880 LRRC52Q8N7C0 313 aa11.87□□□□□ -0.51
PFDN5-212ENST00000550880 KRI1Q8N9T8 703 aaKnown RBP11.87□□□□□ -0.51
PFDN5-212ENST00000550880 TXNDC5Q8NBS9 432 aaKnown RBP11.87□□□□□ -0.51
PFDN5-212ENST00000550880 RLN3Q8WXF3 142 aa11.87□□□□□ -0.51
PFDN5-212ENST00000550880 CEP295NLQ96MC4 621 aa11.87□□□□□ -0.51
PFDN5-212ENST00000550880 GTPBP2Q9BX10 602 aaKnown RBP11.87□□□□□ -0.51
PFDN5-212ENST00000550880 MAGEC2Q9UBF1 373 aaPredicted RBP11.87□□□□□ -0.51
PFDN5-212ENST00000550880 KLK13Q9UKR3 277 aa11.87□□□□□ -0.51
PFDN5-212ENST00000550880 SLC6A14Q9UN76 642 aa11.87□□□□□ -0.51
PFDN5-212ENST00000550880 L1RE1Q9UN81 338 aa11.87□□□□□ -0.51
PFDN5-212ENST00000550880 EXOC7Q9UPT5 735 aa11.87□□□□□ -0.51
PFDN5-212ENST00000550880 THADAQ6YHU6 1953 aa11.87□□□□□ -0.51
PFDN5-212ENST00000550880 TSC2P49815 1807 aa11.86□□□□□ -0.51
PFDN5-212ENST00000550880 NUP205Q92621 2012 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms