RNA–Protein interactions for RNA: ENST00000550811.1

TUBA1A-208, Transcript of tubulin alpha 1a, human

TSL 4

Gene TUBA1A, Length 650 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBA1A-208	ENST00000550811	NME7	Q9Y5B8	376 aa		10.12	□□□□□ -0.79
TUBA1A-208	ENST00000550811	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	10.11	□□□□□ -0.79
TUBA1A-208	ENST00000550811		H3BNC9	293 aa		10.11	□□□□□ -0.79
TUBA1A-208	ENST00000550811	CSPG5	O95196	566 aa		10.11	□□□□□ -0.79
TUBA1A-208	ENST00000550811	PDGFRB	P09619	1106 aa		10.11	□□□□□ -0.79
TUBA1A-208	ENST00000550811	CTSA	P10619	480 aa		10.11	□□□□□ -0.79
TUBA1A-208	ENST00000550811	CD19	P15391	556 aa		10.11	□□□□□ -0.79
TUBA1A-208	ENST00000550811	GNA15	P30679	374 aa		10.11	□□□□□ -0.79
TUBA1A-208	ENST00000550811	CA8	P35219	290 aa		10.11	□□□□□ -0.79
TUBA1A-208	ENST00000550811	BPIFB4	P59827	614 aa		10.11	□□□□□ -0.79
TUBA1A-208	ENST00000550811	ARID5A	Q03989	594 aa		10.11	□□□□□ -0.79
TUBA1A-208	ENST00000550811	GPM6B	Q13491	265 aa		10.11	□□□□□ -0.79
TUBA1A-208	ENST00000550811	MRPL58	Q14197	206 aa	Known RBP	10.11	□□□□□ -0.79
TUBA1A-208	ENST00000550811	SMC1A	Q14683	1233 aa	Known RBP	10.11	□□□□□ -0.79
TUBA1A-208	ENST00000550811	PTPN14	Q15678	1187 aa		10.11	□□□□□ -0.79
TUBA1A-208	ENST00000550811	TDRD12	Q587J7	1177 aa	Known RBP	10.11	□□□□□ -0.79
TUBA1A-208	ENST00000550811	PRSS55	Q6UWB4	352 aa	Predicted RBP	10.11	□□□□□ -0.79
TUBA1A-208	ENST00000550811	ACOT1	Q86TX2	421 aa		10.11	□□□□□ -0.79
TUBA1A-208	ENST00000550811	SLC47A2	Q86VL8	602 aa		10.11	□□□□□ -0.79
TUBA1A-208	ENST00000550811	GPR65	Q8IYL9	337 aa		10.11	□□□□□ -0.79
TUBA1A-208	ENST00000550811	TC2N	Q8N9U0	490 aa		10.11	□□□□□ -0.79
TUBA1A-208	ENST00000550811	SLC4A11	Q8NBS3	891 aa		10.11	□□□□□ -0.79
TUBA1A-208	ENST00000550811	OR8K1	Q8NGG5	319 aa		10.11	□□□□□ -0.79
TUBA1A-208	ENST00000550811	GDPD5	Q8WTR4	605 aa		10.11	□□□□□ -0.79
TUBA1A-208	ENST00000550811	ARNTL2	Q8WYA1	636 aa		10.11	□□□□□ -0.79
TUBA1A-208	ENST00000550811	ASB16	Q96NS5	453 aa		10.11	□□□□□ -0.79
TUBA1A-208	ENST00000550811	PANX2	Q96RD6	677 aa		10.11	□□□□□ -0.79
TUBA1A-208	ENST00000550811	SPSB2	Q99619	263 aa		10.11	□□□□□ -0.79
TUBA1A-208	ENST00000550811	TCF25	Q9BQ70	676 aa		10.11	□□□□□ -0.79
TUBA1A-208	ENST00000550811	OCSTAMP	Q9BR26	566 aa		10.11	□□□□□ -0.79
TUBA1A-208	ENST00000550811	CERS4	Q9HA82	394 aa		10.11	□□□□□ -0.79
TUBA1A-208	ENST00000550811	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	10.11	□□□□□ -0.79
TUBA1A-208	ENST00000550811	AIPL1	Q9NZN9	384 aa		10.11	□□□□□ -0.79
TUBA1A-208	ENST00000550811	CDV3	Q9UKY7	258 aa	Known RBP	10.11	□□□□□ -0.79
TUBA1A-208	ENST00000550811	BACE2	Q9Y5Z0	518 aa		10.11	□□□□□ -0.79
TUBA1A-208	ENST00000550811	CDH23	Q9H251	3354 aa		10.1	□□□□□ -0.79
TUBA1A-208	ENST00000550811	TMEM265	A0A087WTH1	108 aa		10.1	□□□□□ -0.79
TUBA1A-208	ENST00000550811	GRM6	O15303	877 aa		10.1	□□□□□ -0.79
TUBA1A-208	ENST00000550811	THAP12	O43422	761 aa		10.1	□□□□□ -0.79
TUBA1A-208	ENST00000550811	PRMT3	O60678	531 aa		10.1	□□□□□ -0.79
TUBA1A-208	ENST00000550811	LPXN	O60711	386 aa		10.1	□□□□□ -0.79
TUBA1A-208	ENST00000550811	SERPING1	P05155	500 aa		10.1	□□□□□ -0.79
TUBA1A-208	ENST00000550811	PTMA	P06454	111 aa	Known RBP	10.1	□□□□□ -0.79
TUBA1A-208	ENST00000550811	CPB1	P15086	417 aa		10.1	□□□□□ -0.79
TUBA1A-208	ENST00000550811	CYP11B1	P15538	503 aa		10.1	□□□□□ -0.79
TUBA1A-208	ENST00000550811	PTPN1	P18031	435 aa	Known RBP	10.1	□□□□□ -0.79
TUBA1A-208	ENST00000550811	BRD2	P25440	801 aa	Known RBP	10.1	□□□□□ -0.79
TUBA1A-208	ENST00000550811	HNRNPH3	P31942	346 aa	Known RBP	10.1	□□□□□ -0.79
TUBA1A-208	ENST00000550811	PRKCI	P41743	596 aa		10.1	□□□□□ -0.79
TUBA1A-208	ENST00000550811	KLHL30	Q0D2K2	578 aa		10.1	□□□□□ -0.79
TUBA1A-208	ENST00000550811	MAPRE1	Q15691	268 aa	Known RBP	10.1	□□□□□ -0.79
TUBA1A-208	ENST00000550811	MEA1	Q16626	185 aa		10.1	□□□□□ -0.79
TUBA1A-208	ENST00000550811	SGO2	Q562F6	1265 aa		10.1	□□□□□ -0.79
TUBA1A-208	ENST00000550811	MDH1B	Q5I0G3	518 aa		10.1	□□□□□ -0.79
TUBA1A-208	ENST00000550811	KIAA0319	Q5VV43	1072 aa		10.1	□□□□□ -0.79
TUBA1A-208	ENST00000550811	PLPP4	Q5VZY2	271 aa		10.1	□□□□□ -0.79
TUBA1A-208	ENST00000550811	SLC8B1	Q6J4K2	584 aa		10.1	□□□□□ -0.79
TUBA1A-208	ENST00000550811	TMC7	Q7Z402	723 aa		10.1	□□□□□ -0.79
TUBA1A-208	ENST00000550811	DCP1B	Q8IZD4	617 aa	Known RBP	10.1	□□□□□ -0.79
TUBA1A-208	ENST00000550811	CRYBG2	Q8N1P7	616 aa		10.1	□□□□□ -0.79
TUBA1A-208	ENST00000550811	LNX1	Q8TBB1	728 aa	Predicted RBP	10.1	□□□□□ -0.79
TUBA1A-208	ENST00000550811	SPPL3	Q8TCT6	385 aa		10.1	□□□□□ -0.79
TUBA1A-208	ENST00000550811	AUTS2	Q8WXX7	1259 aa		10.1	□□□□□ -0.79
TUBA1A-208	ENST00000550811	MYLPF	Q96A32	169 aa		10.1	□□□□□ -0.79
TUBA1A-208	ENST00000550811	HEXIM2	Q96MH2	286 aa	Known RBP	10.1	□□□□□ -0.79
TUBA1A-208	ENST00000550811	TMEM209	Q96SK2	561 aa		10.1	□□□□□ -0.79
TUBA1A-208	ENST00000550811	ZCWPW1	Q9H0M4	648 aa		10.1	□□□□□ -0.79
TUBA1A-208	ENST00000550811	LMAN2L	Q9H0V9	348 aa		10.1	□□□□□ -0.79
TUBA1A-208	ENST00000550811	NGRN	Q9NPE2	291 aa	Known RBP	10.1	□□□□□ -0.79
TUBA1A-208	ENST00000550811	CRTAC1	Q9NQ79	661 aa		10.1	□□□□□ -0.79
TUBA1A-208	ENST00000550811	FAM49B	Q9NUQ9	324 aa		10.1	□□□□□ -0.79
TUBA1A-208	ENST00000550811	CDY1	Q9Y6F8	540 aa		10.1	□□□□□ -0.79
TUBA1A-208	ENST00000550811	MYH10	P35580	1976 aa		10.1	□□□□□ -0.79
TUBA1A-208	ENST00000550811	PATJ	Q8NI35	1801 aa		10.1	□□□□□ -0.79
TUBA1A-208	ENST00000550811	ATP8B3	O60423	1300 aa		10.09	□□□□□ -0.79
TUBA1A-208	ENST00000550811	CHD7	Q9P2D1	2997 aa		10.09	□□□□□ -0.79
TUBA1A-208	ENST00000550811	TRIOBP	Q9H2D6	2365 aa		10.09	□□□□□ -0.79
TUBA1A-208	ENST00000550811	PLXNA3	P51805	1871 aa		10.09	□□□□□ -0.79
TUBA1A-208	ENST00000550811	EPOP	A6NHQ4	379 aa		10.09	□□□□□ -0.79
TUBA1A-208	ENST00000550811	FSCN2	O14926	492 aa		10.09	□□□□□ -0.79
TUBA1A-208	ENST00000550811	MED7	O43513	233 aa		10.09	□□□□□ -0.79
TUBA1A-208	ENST00000550811	TBC1D4	O60343	1298 aa		10.09	□□□□□ -0.79
TUBA1A-208	ENST00000550811	ATP2C2	O75185	946 aa		10.09	□□□□□ -0.79
TUBA1A-208	ENST00000550811	DKK1	O94907	266 aa		10.09	□□□□□ -0.79
TUBA1A-208	ENST00000550811	CALCA	P01258	141 aa		10.09	□□□□□ -0.79
TUBA1A-208	ENST00000550811	OR4Q2	P0C623	313 aa		10.09	□□□□□ -0.79
TUBA1A-208	ENST00000550811	VDR	P11473	427 aa		10.09	□□□□□ -0.79
TUBA1A-208	ENST00000550811	CCDC130	P13994	396 aa		10.09	□□□□□ -0.79
TUBA1A-208	ENST00000550811	RPL17	P18621	184 aa	Known RBP	10.09	□□□□□ -0.79
TUBA1A-208	ENST00000550811	DNAJB1	P25685	340 aa		10.09	□□□□□ -0.79
TUBA1A-208	ENST00000550811	MAPK1	P28482	360 aa		10.09	□□□□□ -0.79
TUBA1A-208	ENST00000550811	NDUFV1	P49821	464 aa		10.09	□□□□□ -0.79
TUBA1A-208	ENST00000550811	ERVFC1	P60507	584 aa		10.09	□□□□□ -0.79
TUBA1A-208	ENST00000550811	ROR1	Q01973	937 aa		10.09	□□□□□ -0.79
TUBA1A-208	ENST00000550811	SMARCB1	Q12824	385 aa		10.09	□□□□□ -0.79
TUBA1A-208	ENST00000550811	STIL	Q15468	1287 aa		10.09	□□□□□ -0.79
TUBA1A-208	ENST00000550811	OCLN	Q16625	522 aa		10.09	□□□□□ -0.79
TUBA1A-208	ENST00000550811	CCDC142	Q17RM4	750 aa		10.09	□□□□□ -0.79
TUBA1A-208	ENST00000550811	GOLGA7B	Q2TAP0	167 aa		10.09	□□□□□ -0.79
TUBA1A-208	ENST00000550811	SLC39A12	Q504Y0	691 aa		10.09	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms