RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 PXNP49023 591 aaPredicted RBP24.7■■□□□ 1.54
SMARCD1-209ENST00000550477 WNT7BP56706 349 aa24.7■■□□□ 1.54
SMARCD1-209ENST00000550477 PSMD2Q13200 908 aa24.7■■□□□ 1.54
SMARCD1-209ENST00000550477 SOWAHAQ2M3V2 549 aa24.7■■□□□ 1.54
SMARCD1-209ENST00000550477 FAM171BQ6P995 826 aa24.7■■□□□ 1.54
SMARCD1-209ENST00000550477 PDILTQ8N807 584 aa24.7■■□□□ 1.54
SMARCD1-209ENST00000550477 STKLD1Q8NE28 680 aa24.7■■□□□ 1.54
SMARCD1-209ENST00000550477 PKMYT1Q99640 499 aa24.7■■□□□ 1.54
SMARCD1-209ENST00000550477 SYT15Q9BQS2 421 aa24.7■■□□□ 1.54
SMARCD1-209ENST00000550477 TPRP12270 2363 aaKnown RBP24.69■■□□□ 1.54
SMARCD1-209ENST00000550477 EPN2O95208 641 aa24.69■■□□□ 1.54
SMARCD1-209ENST00000550477 PPP3CCP48454 512 aa24.69■■□□□ 1.54
SMARCD1-209ENST00000550477 LIMK1P53667 647 aa24.69■■□□□ 1.54
SMARCD1-209ENST00000550477 STK38Q15208 465 aa24.69■■□□□ 1.54
SMARCD1-209ENST00000550477 FAM173BQ6P4H8 233 aa24.69■■□□□ 1.54
SMARCD1-209ENST00000550477 CXorf38Q8TB03 319 aa24.69■■□□□ 1.54
SMARCD1-209ENST00000550477 INTS4Q96HW7 963 aaKnown RBP24.69■■□□□ 1.54
SMARCD1-209ENST00000550477 CYP2S1Q96SQ9 504 aa24.69■■□□□ 1.54
SMARCD1-209ENST00000550477 MMS19Q96T76 1030 aa24.69■■□□□ 1.54
SMARCD1-209ENST00000550477 TNMDQ9H2S6 317 aa24.69■■□□□ 1.54
SMARCD1-209ENST00000550477 CUEDC2Q9H467 287 aa24.69■■□□□ 1.54
SMARCD1-209ENST00000550477 TRPM5Q9NZQ8 1165 aa24.69■■□□□ 1.54
SMARCD1-209ENST00000550477 SIX4Q9UIU6 781 aa24.69■■□□□ 1.54
SMARCD1-209ENST00000550477 OBSL1O75147 1896 aa24.68■■□□□ 1.54
SMARCD1-209ENST00000550477 TRIM66O15016 1216 aa24.68■■□□□ 1.54
SMARCD1-209ENST00000550477 RHOBTB1O94844 696 aa24.68■■□□□ 1.54
SMARCD1-209ENST00000550477 NFATC1O95644 943 aa24.68■■□□□ 1.54
SMARCD1-209ENST00000550477 ELF2Q15723 593 aa24.68■■□□□ 1.54
SMARCD1-209ENST00000550477 ZNF77Q15935 545 aa24.68■■□□□ 1.54
SMARCD1-209ENST00000550477 PKN3Q6P5Z2 889 aa24.68■■□□□ 1.54
SMARCD1-209ENST00000550477 SYT13Q7L8C5 426 aa24.68■■□□□ 1.54
SMARCD1-209ENST00000550477 OSTM1Q86WC4 334 aa24.68■■□□□ 1.54
SMARCD1-209ENST00000550477 ARL14EPQ8N8R7 260 aaPredicted RBP24.68■■□□□ 1.54
SMARCD1-209ENST00000550477 RPLP0P6Q8NHW5 317 aa24.68■■□□□ 1.54
SMARCD1-209ENST00000550477 SPATA17Q96L03 361 aa24.68■■□□□ 1.54
SMARCD1-209ENST00000550477 FNBP1Q96RU3 617 aa24.68■■□□□ 1.54
SMARCD1-209ENST00000550477 GDF9O60383 454 aa24.67■■□□□ 1.54
SMARCD1-209ENST00000550477 APBB3O95704 486 aa24.67■■□□□ 1.54
SMARCD1-209ENST00000550477 RAP1GAPP47736 663 aa24.67■■□□□ 1.54
SMARCD1-209ENST00000550477 CYP27A1Q02318 531 aa24.67■■□□□ 1.54
SMARCD1-209ENST00000550477 DENND5BQ6ZUT9 1274 aa24.67■■□□□ 1.54
SMARCD1-209ENST00000550477 KBTBD6Q86V97 674 aa24.67■■□□□ 1.54
SMARCD1-209ENST00000550477 WDR49Q8IV35 697 aa24.67■■□□□ 1.54
SMARCD1-209ENST00000550477 SH3RF2Q8TEC5 729 aa24.67■■□□□ 1.54
SMARCD1-209ENST00000550477 CHFRQ96EP1 664 aa24.67■■□□□ 1.54
SMARCD1-209ENST00000550477 ZC3H10Q96K80 434 aaKnown RBP24.67■■□□□ 1.54
SMARCD1-209ENST00000550477 USP28Q96RU2 1077 aa24.67■■□□□ 1.54
SMARCD1-209ENST00000550477 SNX25Q9H3E2 840 aa24.67■■□□□ 1.54
SMARCD1-209ENST00000550477 GREB1Q4ZG55 1949 aa24.67■■□□□ 1.54
SMARCD1-209ENST00000550477 TADA3O75528 432 aa24.66■■□□□ 1.54
SMARCD1-209ENST00000550477 PDGFRBP09619 1106 aa24.66■■□□□ 1.54
SMARCD1-209ENST00000550477 FAM163BP0C2L3 166 aa24.66■■□□□ 1.54
SMARCD1-209ENST00000550477 TCF3P15923 654 aa24.66■■□□□ 1.54
SMARCD1-209ENST00000550477 TNNI1P19237 187 aa24.66■■□□□ 1.54
SMARCD1-209ENST00000550477 KCNA4P22459 653 aa24.66■■□□□ 1.54
SMARCD1-209ENST00000550477 USP4Q13107 963 aa24.66■■□□□ 1.54
SMARCD1-209ENST00000550477 LMBRD2Q68DH5 695 aaPredicted RBP24.66■■□□□ 1.54
SMARCD1-209ENST00000550477 FBRSL1Q9HCM7 1045 aaKnown RBP24.66■■□□□ 1.54
SMARCD1-209ENST00000550477 HSPBP1Q9NZL4 362 aa24.66■■□□□ 1.54
SMARCD1-209ENST00000550477 GCNT4Q9P109 453 aa24.66■■□□□ 1.54
SMARCD1-209ENST00000550477 ARHGAP26Q9UNA1 814 aa24.66■■□□□ 1.54
SMARCD1-209ENST00000550477 WNT6Q9Y6F9 365 aa24.66■■□□□ 1.54
SMARCD1-209ENST00000550477 EIF3DO15371 548 aaKnown RBP eCLIP24.65■■□□□ 1.54
SMARCD1-209ENST00000550477 WARSP23381 471 aaKnown RBP24.65■■□□□ 1.54
SMARCD1-209ENST00000550477 BDNFP23560 247 aa24.65■■□□□ 1.54
SMARCD1-209ENST00000550477 GNL1P36915 607 aaPredicted RBP24.65■■□□□ 1.54
SMARCD1-209ENST00000550477 DMC1Q14565 340 aa24.65■■□□□ 1.54
SMARCD1-209ENST00000550477 EML3Q32P44 896 aa24.65■■□□□ 1.54
SMARCD1-209ENST00000550477 C11orf74Q86VG3 221 aa24.65■■□□□ 1.54
SMARCD1-209ENST00000550477 OR5B17Q8NGF7 314 aa24.65■■□□□ 1.54
SMARCD1-209ENST00000550477 MYLPFQ96A32 169 aa24.65■■□□□ 1.54
SMARCD1-209ENST00000550477 CHAMP1Q96JM3 812 aa24.65■■□□□ 1.54
SMARCD1-209ENST00000550477 ZNF396Q96N95 335 aaPredicted RBP24.65■■□□□ 1.54
SMARCD1-209ENST00000550477 HHIPQ96QV1 700 aa24.65■■□□□ 1.54
SMARCD1-209ENST00000550477 SLC22A12Q96S37 553 aa24.65■■□□□ 1.54
SMARCD1-209ENST00000550477 VPS45Q9NRW7 570 aa24.65■■□□□ 1.54
SMARCD1-209ENST00000550477 EBF1Q9UH73 591 aa24.65■■□□□ 1.54
SMARCD1-209ENST00000550477 C2orf78A6NCI8 922 aa24.64■■□□□ 1.54
SMARCD1-209ENST00000550477 LMO2P25791 158 aa24.64■■□□□ 1.54
SMARCD1-209ENST00000550477 NASPP49321 788 aaPredicted RBP24.64■■□□□ 1.54
SMARCD1-209ENST00000550477 PSMC1P62191 440 aaKnown RBP24.64■■□□□ 1.54
SMARCD1-209ENST00000550477 SNRPFP62306 86 aaKnown RBP24.64■■□□□ 1.54
SMARCD1-209ENST00000550477 TNNC1P63316 161 aa24.64■■□□□ 1.54
SMARCD1-209ENST00000550477 HS2ST1Q7LGA3 356 aa24.64■■□□□ 1.54
SMARCD1-209ENST00000550477 CBWD2Q8IUF1 395 aa24.64■■□□□ 1.54
SMARCD1-209ENST00000550477 KIAA1958Q8N8K9 716 aa24.64■■□□□ 1.54
SMARCD1-209ENST00000550477 IQUBQ8NA54 791 aa24.64■■□□□ 1.54
SMARCD1-209ENST00000550477 OR6B3Q8NGW1 331 aa24.64■■□□□ 1.54
SMARCD1-209ENST00000550477 RIN3Q8TB24 985 aa24.64■■□□□ 1.54
SMARCD1-209ENST00000550477 FGFBP2Q9BYJ0 223 aa24.64■■□□□ 1.54
SMARCD1-209ENST00000550477 A0A087X0B3 334 aa24.63■■□□□ 1.53
SMARCD1-209ENST00000550477 SLC9A3R1O14745 358 aaPredicted RBP24.63■■□□□ 1.53
SMARCD1-209ENST00000550477 SPTLC2O15270 562 aa24.63■■□□□ 1.53
SMARCD1-209ENST00000550477 STX6O43752 255 aa24.63■■□□□ 1.53
SMARCD1-209ENST00000550477 ATP2C2O75185 946 aa24.63■■□□□ 1.53
SMARCD1-209ENST00000550477 MPLP40238 635 aa24.63■■□□□ 1.53
SMARCD1-209ENST00000550477 DGKEP52429 567 aa24.63■■□□□ 1.53
SMARCD1-209ENST00000550477 ASIC1P78348 528 aa24.63■■□□□ 1.53
SMARCD1-209ENST00000550477 SF3A2Q15428 464 aaKnown RBP24.63■■□□□ 1.53
SMARCD1-209ENST00000550477 PLK5Q496M5 336 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms