RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 CBX8Q9HC52 389 aa23.94■■□□□ 1.42
BRF1-216ENST00000550208 SIX2Q9NPC8 291 aa23.94■■□□□ 1.42
BRF1-216ENST00000550208 ASAH2Q9NR71 780 aa23.94■■□□□ 1.42
BRF1-216ENST00000550208 PCDHB4Q9Y5E5 795 aa23.94■■□□□ 1.42
BRF1-216ENST00000550208 LRRC10BA6NIK2 292 aa23.93■■□□□ 1.42
BRF1-216ENST00000550208 SLC38A8A6NNN8 435 aa23.93■■□□□ 1.42
BRF1-216ENST00000550208 RNF225M0QZC1 329 aaPredicted RBP23.93■■□□□ 1.42
BRF1-216ENST00000550208 MOSPD3O75425 235 aa23.93■■□□□ 1.42
BRF1-216ENST00000550208 ATP1A3P13637 1013 aa23.93■■□□□ 1.42
BRF1-216ENST00000550208 HMGA1P17096 107 aaKnown RBP23.93■■□□□ 1.42
BRF1-216ENST00000550208 GJA1P17302 382 aa23.93■■□□□ 1.42
BRF1-216ENST00000550208 ADORA2BP29275 332 aa23.93■■□□□ 1.42
BRF1-216ENST00000550208 TAF12Q16514 161 aa23.93■■□□□ 1.42
BRF1-216ENST00000550208 DPY19L2P1Q6NXN4 242 aa23.93■■□□□ 1.42
BRF1-216ENST00000550208 POTEHQ6S545 545 aa23.93■■□□□ 1.42
BRF1-216ENST00000550208 ING5Q8WYH8 240 aa23.93■■□□□ 1.42
BRF1-216ENST00000550208 ACSF2Q96CM8 615 aaPredicted RBP23.93■■□□□ 1.42
BRF1-216ENST00000550208 C8orf48Q96LL4 319 aa23.93■■□□□ 1.42
BRF1-216ENST00000550208 HNRNPABQ99729 332 aaKnown RBP23.93■■□□□ 1.42
BRF1-216ENST00000550208 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.93■■□□□ 1.422e-7■■■■□ 25.7
BRF1-216ENST00000550208 DENND4AQ7Z401 1863 aa23.93■■□□□ 1.42
BRF1-216ENST00000550208 C5orf42Q9H799 3197 aa23.93■■□□□ 1.42
BRF1-216ENST00000550208 BECN2A8MW95 431 aa23.92■■□□□ 1.42
BRF1-216ENST00000550208 F8VP50 259 aa23.92■■□□□ 1.42
BRF1-216ENST00000550208 ZNF197O14709 1029 aa23.92■■□□□ 1.42
BRF1-216ENST00000550208 CSH1P0DML2 217 aa23.92■■□□□ 1.42
BRF1-216ENST00000550208 CSH2P0DML3 217 aa23.92■■□□□ 1.42
BRF1-216ENST00000550208 TRIM21P19474 475 aaKnown RBP23.92■■□□□ 1.42
BRF1-216ENST00000550208 PPP1R26Q5T8A7 1209 aaPredicted RBP23.92■■□□□ 1.42
BRF1-216ENST00000550208 TMEM270Q6UE05 265 aa23.92■■□□□ 1.42
BRF1-216ENST00000550208 TDRD5Q8NAT2 981 aaKnown RBP23.92■■□□□ 1.42
BRF1-216ENST00000550208 ANKRD20A12PQ8NF67 263 aa23.92■■□□□ 1.42
BRF1-216ENST00000550208 FGF13Q92913 245 aa23.92■■□□□ 1.42
BRF1-216ENST00000550208 SPATA17Q96L03 361 aa23.92■■□□□ 1.42
BRF1-216ENST00000550208 KCNK16Q96T55 309 aa23.92■■□□□ 1.42
BRF1-216ENST00000550208 DNAI2Q9GZS0 605 aa23.92■■□□□ 1.42
BRF1-216ENST00000550208 LIMD1Q9UGP4 676 aa23.92■■□□□ 1.42
BRF1-216ENST00000550208 MAGED2Q9UNF1 606 aaPredicted RBP23.92■■□□□ 1.42
BRF1-216ENST00000550208 PTPRDP23468 1912 aa23.92■■□□□ 1.42
BRF1-216ENST00000550208 ATP8B3O60423 1300 aa23.91■■□□□ 1.42
BRF1-216ENST00000550208 TRIM66O15016 1216 aa23.91■■□□□ 1.42
BRF1-216ENST00000550208 AP1G2O75843 785 aa23.91■■□□□ 1.42
BRF1-216ENST00000550208 TPM2P07951 284 aa23.91■■□□□ 1.42
BRF1-216ENST00000550208 CEBPBP17676 345 aa23.91■■□□□ 1.42
BRF1-216ENST00000550208 ANXA13P27216 316 aa23.91■■□□□ 1.42
BRF1-216ENST00000550208 APTXQ7Z2E3 356 aaKnown RBP23.91■■□□□ 1.42
BRF1-216ENST00000550208 ZDHHC14Q8IZN3 488 aa23.91■■□□□ 1.42
BRF1-216ENST00000550208 LEMD2Q8NC56 503 aa23.91■■□□□ 1.42
BRF1-216ENST00000550208 SHKBP1Q8TBC3 707 aa23.91■■□□□ 1.42
BRF1-216ENST00000550208 MCRS1Q96EZ8 462 aa23.91■■□□□ 1.42
BRF1-216ENST00000550208 SMARCD1Q96GM5 515 aa23.91■■□□□ 1.42
BRF1-216ENST00000550208 SMOQ99835 787 aa23.91■■□□□ 1.42
BRF1-216ENST00000550208 IL21Q9HBE4 155 aa23.91■■□□□ 1.42
BRF1-216ENST00000550208 APEX2Q9UBZ4 518 aa23.91■■□□□ 1.42
BRF1-216ENST00000550208 CDH7Q9ULB5 785 aa23.91■■□□□ 1.42
BRF1-216ENST00000550208 BEST1O76090 585 aa23.9■■□□□ 1.42
BRF1-216ENST00000550208 NOL4O94818 638 aa23.9■■□□□ 1.42
BRF1-216ENST00000550208 LAMP2P13473 410 aa23.9■■□□□ 1.42
BRF1-216ENST00000550208 GABRR2P28476 465 aa23.9■■□□□ 1.42
BRF1-216ENST00000550208 MFAP3P55082 362 aa23.9■■□□□ 1.42
BRF1-216ENST00000550208 ARHGAP44Q17R89 818 aa23.9■■□□□ 1.42
BRF1-216ENST00000550208 GAREM2Q75VX8 874 aa23.9■■□□□ 1.42
BRF1-216ENST00000550208 LUZP1Q86V48 1076 aa23.9■■□□□ 1.42
BRF1-216ENST00000550208 PLCD3Q8N3E9 789 aa23.9■■□□□ 1.42
BRF1-216ENST00000550208 ZMIZ2Q8NF64 920 aa23.9■■□□□ 1.42
BRF1-216ENST00000550208 KRT82Q9NSB4 513 aa23.9■■□□□ 1.42
BRF1-216ENST00000550208 AJAP1Q9UKB5 411 aaPredicted RBP23.9■■□□□ 1.42
BRF1-216ENST00000550208 A0A1W2PRU2 124 aa23.89■■□□□ 1.41
BRF1-216ENST00000550208 MICAL2O94851 1124 aa23.89■■□□□ 1.41
BRF1-216ENST00000550208 CALCAP01258 141 aa23.89■■□□□ 1.41
BRF1-216ENST00000550208 TEAD2Q15562 447 aa23.89■■□□□ 1.41
BRF1-216ENST00000550208 RNF135Q8IUD6 432 aa23.89■■□□□ 1.41
BRF1-216ENST00000550208 NPAS3Q8IXF0 933 aa23.89■■□□□ 1.41
BRF1-216ENST00000550208 ST13P5Q8NFI4 369 aaPredicted RBP23.89■■□□□ 1.41
BRF1-216ENST00000550208 JAKMIP2Q96AA8 810 aa23.89■■□□□ 1.41
BRF1-216ENST00000550208 LSM14BQ9BX40 385 aaKnown RBP23.89■■□□□ 1.41
BRF1-216ENST00000550208 ATXN3LQ9H3M9 355 aa23.89■■□□□ 1.41
BRF1-216ENST00000550208 EPS15L1Q9UBC2 864 aa23.89■■□□□ 1.41
BRF1-216ENST00000550208 DNAJC12Q9UKB3 198 aa23.89■■□□□ 1.41
BRF1-216ENST00000550208 CNTN6Q9UQ52 1028 aa23.89■■□□□ 1.41
BRF1-216ENST00000550208 CAVIN2O95810 425 aa23.88■■□□□ 1.41
BRF1-216ENST00000550208 F11P03951 625 aa23.88■■□□□ 1.41
BRF1-216ENST00000550208 VDRP11473 427 aa23.88■■□□□ 1.41
BRF1-216ENST00000550208 CD19P15391 556 aa23.88■■□□□ 1.41
BRF1-216ENST00000550208 MAP3K7CLP57077 242 aa23.88■■□□□ 1.41
BRF1-216ENST00000550208 USP46P62068 366 aa23.88■■□□□ 1.41
BRF1-216ENST00000550208 FKBP15Q5T1M5 1219 aa23.88■■□□□ 1.41
BRF1-216ENST00000550208 KLHDC7AQ5VTJ3 777 aa23.88■■□□□ 1.41
BRF1-216ENST00000550208 ARHGAP17Q68EM7 881 aa23.88■■□□□ 1.41
BRF1-216ENST00000550208 DENND5BQ6ZUT9 1274 aa23.88■■□□□ 1.41
BRF1-216ENST00000550208 ENOSF1Q7L5Y1 443 aa23.88■■□□□ 1.41
BRF1-216ENST00000550208 RBBP8NLQ8NC74 664 aaPredicted RBP23.88■■□□□ 1.41
BRF1-216ENST00000550208 FAM81BQ96LP2 452 aa23.88■■□□□ 1.41
BRF1-216ENST00000550208 MYRFLQ96LU7 910 aa23.88■■□□□ 1.41
BRF1-216ENST00000550208 CEP295NLQ96MC4 621 aa23.88■■□□□ 1.41
BRF1-216ENST00000550208 ZSWIM3Q96MP5 696 aa23.88■■□□□ 1.41
BRF1-216ENST00000550208 CSNK1G1Q9HCP0 422 aa23.88■■□□□ 1.41
BRF1-216ENST00000550208 DMAP1Q9NPF5 467 aaPredicted RBP23.88■■□□□ 1.41
BRF1-216ENST00000550208 KIAA1257Q9ULG3 409 aa23.88■■□□□ 1.41
BRF1-216ENST00000550208 DOCK8Q8NF50 2099 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms