RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 ECI2O75521 394 aa27.57■■■□□ 2
CPSF6-205ENST00000550075 PTMSP20962 102 aa27.57■■■□□ 2
CPSF6-205ENST00000550075 MTIF2P46199 727 aaKnown RBP27.57■■■□□ 2
CPSF6-205ENST00000550075 ORC1Q13415 861 aa27.57■■■□□ 2
CPSF6-205ENST00000550075 CUL2Q13617 745 aa27.57■■■□□ 2
CPSF6-205ENST00000550075 DENND5BQ6ZUT9 1274 aa27.57■■■□□ 2
CPSF6-205ENST00000550075 SLC44A3Q8N4M1 653 aa27.57■■■□□ 2
CPSF6-205ENST00000550075 SMARCD2Q92925 531 aa27.57■■■□□ 2
CPSF6-205ENST00000550075 MYRFLQ96LU7 910 aa27.57■■■□□ 2
CPSF6-205ENST00000550075 ASB16Q96NS5 453 aa27.57■■■□□ 2
CPSF6-205ENST00000550075 IL21Q9HBE4 155 aa27.57■■■□□ 2
CPSF6-205ENST00000550075 DMAP1Q9NPF5 467 aaPredicted RBP27.57■■■□□ 2
CPSF6-205ENST00000550075 CISHQ9NSE2 258 aa27.57■■■□□ 2
CPSF6-205ENST00000550075 CLDN5O00501 218 aa27.56■■■□□ 2
CPSF6-205ENST00000550075 SRFP11831 508 aa27.56■■■□□ 2
CPSF6-205ENST00000550075 DDX6P26196 483 aaKnown RBP eCLIP27.56■■■□□ 2
CPSF6-205ENST00000550075 STX1AQ16623 288 aa27.56■■■□□ 2
CPSF6-205ENST00000550075 GPR158Q5T848 1215 aa27.56■■■□□ 2
CPSF6-205ENST00000550075 ZSCAN18Q8TBC5 510 aaPredicted RBP27.56■■■□□ 2
CPSF6-205ENST00000550075 MRPS31Q92665 395 aaKnown RBP27.56■■■□□ 2
CPSF6-205ENST00000550075 TATDN2Q93075 761 aa27.56■■■□□ 2
CPSF6-205ENST00000550075 KXD1Q9BQD3 176 aa27.56■■■□□ 2
CPSF6-205ENST00000550075 ZFP14Q9HCL3 533 aa27.56■■■□□ 2
CPSF6-205ENST00000550075 KRT82Q9NSB4 513 aa27.56■■■□□ 2
CPSF6-205ENST00000550075 FAM49BQ9NUQ9 324 aa27.56■■■□□ 2
CPSF6-205ENST00000550075 TECTAO75443 2155 aa27.55■■■□□ 2
CPSF6-205ENST00000550075 TMEM221A6NGB7 291 aa27.55■■■□□ 2
CPSF6-205ENST00000550075 M0R296 226 aa27.55■■■□□ 2
CPSF6-205ENST00000550075 CCDC130P13994 396 aa27.55■■■□□ 2
CPSF6-205ENST00000550075 CYP4F8P98187 520 aa27.55■■■□□ 2
CPSF6-205ENST00000550075 LRMPQ12912 555 aa27.55■■■□□ 2
CPSF6-205ENST00000550075 FAM78AQ5JUQ0 283 aa27.55■■■□□ 2
CPSF6-205ENST00000550075 FUKQ8N0W3 1084 aa27.55■■■□□ 2
CPSF6-205ENST00000550075 STKLD1Q8NE28 680 aa27.55■■■□□ 2
CPSF6-205ENST00000550075 SLC2A14Q8TDB8 520 aa27.55■■■□□ 2
CPSF6-205ENST00000550075 E2F7Q96AV8 911 aa27.55■■■□□ 2
CPSF6-205ENST00000550075 ELSPBP1Q96BH3 223 aa27.55■■■□□ 2
CPSF6-205ENST00000550075 TWNKQ96RR1 684 aa27.55■■■□□ 2
CPSF6-205ENST00000550075 ARID3AQ99856 593 aa27.55■■■□□ 2
CPSF6-205ENST00000550075 TASP1Q9H6P5 420 aa27.55■■■□□ 2
CPSF6-205ENST00000550075 TRPV4Q9HBA0 871 aa27.55■■■□□ 2
CPSF6-205ENST00000550075 NUP210Q8TEM1 1887 aaPredicted RBP27.55■■■□□ 2
CPSF6-205ENST00000550075 GREB1Q4ZG55 1949 aa27.55■■■□□ 2
CPSF6-205ENST00000550075 FAM86C2PA6NEL3 165 aa27.54■■■□□ 2
CPSF6-205ENST00000550075 PRR33A8MZF0 331 aa27.54■■■□□ 2
CPSF6-205ENST00000550075 NRG2O14511 850 aaPredicted RBP27.54■■■□□ 2
CPSF6-205ENST00000550075 AP1G2O75843 785 aa27.54■■■□□ 2
CPSF6-205ENST00000550075 FBXL21Q9UKT6 434 aa27.54■■■□□ 2
CPSF6-205ENST00000550075 MYH10P35580 1976 aa27.53■■■□□ 2
CPSF6-205ENST00000550075 DENND4CQ5VZ89 1909 aa27.53■■■□□ 2
CPSF6-205ENST00000550075 OBSL1O75147 1896 aa27.53■■■□□ 2
CPSF6-205ENST00000550075 SOBPA7XYQ1 873 aa27.53■■■□□ 2
CPSF6-205ENST00000550075 RTN3O95197 1032 aaPredicted RBP27.53■■■□□ 2
CPSF6-205ENST00000550075 F11P03951 625 aa27.53■■■□□ 2
CPSF6-205ENST00000550075 FAM200BP0CF97 657 aa27.53■■■□□ 2
CPSF6-205ENST00000550075 ZNF394Q53GI3 561 aa27.53■■■□□ 2
CPSF6-205ENST00000550075 IRF2BP1Q8IU81 584 aa27.53■■■□□ 2
CPSF6-205ENST00000550075 PPM1KQ8N3J5 372 aa27.53■■■□□ 2
CPSF6-205ENST00000550075 WHAMMQ8TF30 809 aa27.53■■■□□ 2
CPSF6-205ENST00000550075 ZSWIM3Q96MP5 696 aa27.53■■■□□ 2
CPSF6-205ENST00000550075 HNRNPABQ99729 332 aaKnown RBP27.53■■■□□ 2
CPSF6-205ENST00000550075 SMOC2Q9H3U7 446 aa27.53■■■□□ 2
CPSF6-205ENST00000550075 GCNT4Q9P109 453 aa27.53■■■□□ 2
CPSF6-205ENST00000550075 FCARP24071 287 aa27.52■■■□□ 2
CPSF6-205ENST00000550075 ADORA2BP29275 332 aa27.52■■■□□ 2
CPSF6-205ENST00000550075 MAN2A1Q16706 1144 aa27.52■■■□□ 2
CPSF6-205ENST00000550075 STXBP5Q5T5C0 1151 aa27.52■■■□□ 2
CPSF6-205ENST00000550075 C12orf29Q8N999 325 aa27.52■■■□□ 2
CPSF6-205ENST00000550075 EHBP1Q8NDI1 1231 aa27.52■■■□□ 2
CPSF6-205ENST00000550075 ST13P5Q8NFI4 369 aaPredicted RBP27.52■■■□□ 2
CPSF6-205ENST00000550075 DEPDC1BQ8WUY9 529 aa27.52■■■□□ 2
CPSF6-205ENST00000550075 CYFIP2Q96F07 1278 aa27.52■■■□□ 2
CPSF6-205ENST00000550075 TMEM176AQ96HP8 235 aa27.52■■■□□ 2
CPSF6-205ENST00000550075 TTLL2Q9BWV7 592 aa27.52■■■□□ 2
CPSF6-205ENST00000550075 INTS2Q9H0H0 1204 aaKnown RBP27.52■■■□□ 2
CPSF6-205ENST00000550075 C11orf16Q9NQ32 467 aa27.52■■■□□ 2
CPSF6-205ENST00000550075 SLC2A4RGQ9NR83 387 aa27.52■■■□□ 2
CPSF6-205ENST00000550075 DPYSL4O14531 572 aa27.51■■□□□ 1.99
CPSF6-205ENST00000550075 NARSO43776 548 aaKnown RBP27.51■■□□□ 1.99
CPSF6-205ENST00000550075 CACNA2D1P54289 1103 aa27.51■■□□□ 1.99
CPSF6-205ENST00000550075 TANGO2Q6ICL3 276 aa27.51■■□□□ 1.99
CPSF6-205ENST00000550075 CAVIN1Q6NZI2 390 aaKnown RBP27.51■■□□□ 1.99
CPSF6-205ENST00000550075 PAQR9Q6ZVX9 377 aa27.51■■□□□ 1.99
CPSF6-205ENST00000550075 NUP93Q8N1F7 819 aa27.51■■□□□ 1.99
CPSF6-205ENST00000550075 LMO3Q8TAP4 145 aa27.51■■□□□ 1.99
CPSF6-205ENST00000550075 ENOX1Q8TC92 643 aaKnown RBP27.51■■□□□ 1.99
CPSF6-205ENST00000550075 HEXIM2Q96MH2 286 aaKnown RBP27.51■■□□□ 1.99
CPSF6-205ENST00000550075 SLITRK1Q96PX8 696 aa27.51■■□□□ 1.99
CPSF6-205ENST00000550075 TMEM63CQ9P1W3 806 aa27.51■■□□□ 1.99
CPSF6-205ENST00000550075 NFE2L3Q9Y4A8 694 aa27.51■■□□□ 1.99
CPSF6-205ENST00000550075 GTPBP10A4D1E9 387 aaKnown RBP27.5■■□□□ 1.99
CPSF6-205ENST00000550075 PRKCSHP14314 528 aaPredicted RBP27.5■■□□□ 1.99
CPSF6-205ENST00000550075 WEE1P30291 646 aa27.5■■□□□ 1.99
CPSF6-205ENST00000550075 AVPR1AP37288 418 aa27.5■■□□□ 1.99
CPSF6-205ENST00000550075 PPP3CCP48454 512 aa27.5■■□□□ 1.99
CPSF6-205ENST00000550075 PFKPQ01813 784 aa27.5■■□□□ 1.99
CPSF6-205ENST00000550075 GCNT1Q02742 428 aa27.5■■□□□ 1.99
CPSF6-205ENST00000550075 POTEHQ6S545 545 aa27.5■■□□□ 1.99
CPSF6-205ENST00000550075 GBP6Q6ZN66 633 aa27.5■■□□□ 1.99
CPSF6-205ENST00000550075 TMEM150AQ86TG1 271 aa27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms