RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 CSH2P0DML3 217 aa17.02■□□□□ 0.32
COX6A1-203ENST00000550009 ORC1Q13415 861 aa17.02■□□□□ 0.32
COX6A1-203ENST00000550009 SURF1Q15526 300 aa17.02■□□□□ 0.32
COX6A1-203ENST00000550009 WDR72Q3MJ13 1102 aa17.02■□□□□ 0.32
COX6A1-203ENST00000550009 C12orf56Q8IXR9 622 aa17.02■□□□□ 0.32
COX6A1-203ENST00000550009 ARL14EPQ8N8R7 260 aaPredicted RBP17.02■□□□□ 0.32
COX6A1-203ENST00000550009 OR6B3Q8NGW1 331 aa17.02■□□□□ 0.32
COX6A1-203ENST00000550009 GCNAQ96QF7 691 aa17.02■□□□□ 0.32
COX6A1-203ENST00000550009 FAM83CQ9BQN1 747 aa17.02■□□□□ 0.32
COX6A1-203ENST00000550009 KIAA1586Q9HCI6 787 aa17.02■□□□□ 0.32
COX6A1-203ENST00000550009 FBRSL1Q9HCM7 1045 aaKnown RBP17.02■□□□□ 0.32
COX6A1-203ENST00000550009 EXOC1Q9NV70 894 aa17.02■□□□□ 0.32
COX6A1-203ENST00000550009 CDH9Q9ULB4 789 aa17.02■□□□□ 0.32
COX6A1-203ENST00000550009 MAN2B1O00754 1011 aa17.01■□□□□ 0.31
COX6A1-203ENST00000550009 SCAMP3O14828 347 aaKnown RBP17.01■□□□□ 0.31
COX6A1-203ENST00000550009 FGF19O95750 216 aa17.01■□□□□ 0.31
COX6A1-203ENST00000550009 C4BPAP04003 597 aaKnown RBP17.01■□□□□ 0.31
COX6A1-203ENST00000550009 RPN1P04843 607 aaKnown RBP17.01■□□□□ 0.31
COX6A1-203ENST00000550009 PCSK1P29120 753 aa17.01■□□□□ 0.31
COX6A1-203ENST00000550009 GNL1P36915 607 aaPredicted RBP17.01■□□□□ 0.31
COX6A1-203ENST00000550009 SRSF5Q13243 272 aaKnown RBP17.01■□□□□ 0.31
COX6A1-203ENST00000550009 CFAP221Q4G0U5 840 aa17.01■□□□□ 0.31
COX6A1-203ENST00000550009 SPOPLQ6IQ16 392 aa17.01■□□□□ 0.31
COX6A1-203ENST00000550009 HS2ST1Q7LGA3 356 aa17.01■□□□□ 0.31
COX6A1-203ENST00000550009 KIAA2013Q8IYS2 634 aa17.01■□□□□ 0.31
COX6A1-203ENST00000550009 FSIP1Q8NA03 581 aa17.01■□□□□ 0.31
COX6A1-203ENST00000550009 PARD3BQ8TEW8 1205 aa17.01■□□□□ 0.31
COX6A1-203ENST00000550009 NELL1Q92832 810 aa17.01■□□□□ 0.31
COX6A1-203ENST00000550009 E2F7Q96AV8 911 aa17.01■□□□□ 0.31
COX6A1-203ENST00000550009 NELL2Q99435 816 aa17.01■□□□□ 0.31
COX6A1-203ENST00000550009 B3GNT5Q9BYG0 378 aa17.01■□□□□ 0.31
COX6A1-203ENST00000550009 ZNF518BQ9C0D4 1074 aa17.01■□□□□ 0.31
COX6A1-203ENST00000550009 ABCB6Q9NP58 842 aa17.01■□□□□ 0.31
COX6A1-203ENST00000550009 MAGEC2Q9UBF1 373 aaPredicted RBP17.01■□□□□ 0.31
COX6A1-203ENST00000550009 HMGXB4Q9UGU5 601 aa17.01■□□□□ 0.31
COX6A1-203ENST00000550009 FBXO4Q9UKT5 387 aa17.01■□□□□ 0.31
COX6A1-203ENST00000550009 MRPS17Q9Y2R5 130 aaKnown RBP17.01■□□□□ 0.31
COX6A1-203ENST00000550009 F8VP50 259 aa17■□□□□ 0.31
COX6A1-203ENST00000550009 WEE1P30291 646 aa17■□□□□ 0.31
COX6A1-203ENST00000550009 GRIK1P39086 918 aa17■□□□□ 0.31
COX6A1-203ENST00000550009 RPL10AP62906 217 aaKnown RBP17■□□□□ 0.31
COX6A1-203ENST00000550009 KRT85P78386 507 aa17■□□□□ 0.31
COX6A1-203ENST00000550009 LPAL2Q16609 132 aa17■□□□□ 0.31
COX6A1-203ENST00000550009 ARHGAP29Q52LW3 1261 aa17■□□□□ 0.31
COX6A1-203ENST00000550009 DPH6Q7L8W6 267 aa17■□□□□ 0.31
COX6A1-203ENST00000550009 MON1AQ86VX9 555 aa17■□□□□ 0.31
COX6A1-203ENST00000550009 SMYD4Q8IYR2 804 aaPredicted RBP17■□□□□ 0.31
COX6A1-203ENST00000550009 CELF5Q8N6W0 485 aaKnown RBP17■□□□□ 0.31
COX6A1-203ENST00000550009 MYRFLQ96LU7 910 aa17■□□□□ 0.31
COX6A1-203ENST00000550009 SNX25Q9H3E2 840 aa17■□□□□ 0.31
COX6A1-203ENST00000550009 TDP1Q9NUW8 608 aa17■□□□□ 0.31
COX6A1-203ENST00000550009 OBP2AQ9NY56 170 aa17■□□□□ 0.31
COX6A1-203ENST00000550009 GCNT4Q9P109 453 aa17■□□□□ 0.31
COX6A1-203ENST00000550009 FAM237AA0A1B0GTK4 181 aa16.99■□□□□ 0.31
COX6A1-203ENST00000550009 NCAM2O15394 837 aa16.99■□□□□ 0.31
COX6A1-203ENST00000550009 NR3C1P04150 777 aa16.99■□□□□ 0.31
COX6A1-203ENST00000550009 PTPN1P18031 435 aaKnown RBP16.99■□□□□ 0.31
COX6A1-203ENST00000550009 AVPR1AP37288 418 aa16.99■□□□□ 0.31
COX6A1-203ENST00000550009 MAGEA11P43364 429 aa16.99■□□□□ 0.31
COX6A1-203ENST00000550009 SYKP43405 635 aa16.99■□□□□ 0.31
COX6A1-203ENST00000550009 DPYDQ12882 1025 aa16.99■□□□□ 0.31
COX6A1-203ENST00000550009 IFRD2Q12894 506 aaPredicted RBP16.99■□□□□ 0.31
COX6A1-203ENST00000550009 ZNF528Q3MIS6 628 aa16.99■□□□□ 0.31
COX6A1-203ENST00000550009 PAQR9Q6ZVX9 377 aa16.99■□□□□ 0.31
COX6A1-203ENST00000550009 ZBTB44Q8NCP5 570 aa16.99■□□□□ 0.31
COX6A1-203ENST00000550009 MYCBPAPQ8TBZ2 947 aa16.99■□□□□ 0.31
COX6A1-203ENST00000550009 MRPS31Q92665 395 aaKnown RBP16.99■□□□□ 0.31
COX6A1-203ENST00000550009 ERCC4Q92889 916 aaPredicted RBP16.99■□□□□ 0.31
COX6A1-203ENST00000550009 EEF2KMTQ96G04 330 aa16.99■□□□□ 0.31
COX6A1-203ENST00000550009 TRMT2BQ96GJ1 504 aaKnown RBP16.99■□□□□ 0.31
COX6A1-203ENST00000550009 LINC00597Q9H2U6 94 aa16.99■□□□□ 0.31
COX6A1-203ENST00000550009 R3HCC1Q9Y3T6 440 aaKnown RBP16.99■□□□□ 0.31
COX6A1-203ENST00000550009 WNT6Q9Y6F9 365 aa16.99■□□□□ 0.31
COX6A1-203ENST00000550009 CEP250Q9BV73 2442 aa16.98■□□□□ 0.31
COX6A1-203ENST00000550009 LILRB5O75023 590 aa16.98■□□□□ 0.31
COX6A1-203ENST00000550009 PHACTR2O75167 634 aa16.98■□□□□ 0.31
COX6A1-203ENST00000550009 TACC1O75410 805 aa16.98■□□□□ 0.31
COX6A1-203ENST00000550009 TRIM49P0CI25 452 aa16.98■□□□□ 0.31
COX6A1-203ENST00000550009 TRIM49CP0CI26 452 aa16.98■□□□□ 0.31
COX6A1-203ENST00000550009 MAGEA9P43362 315 aa16.98■□□□□ 0.31
COX6A1-203ENST00000550009 PGFP49763 221 aa16.98■□□□□ 0.31
COX6A1-203ENST00000550009 TNNC1P63316 161 aa16.98■□□□□ 0.31
COX6A1-203ENST00000550009 BIRC3Q13489 604 aa16.98■□□□□ 0.31
COX6A1-203ENST00000550009 TRPC3Q13507 836 aa16.98■□□□□ 0.31
COX6A1-203ENST00000550009 RUNX3Q13761 415 aa16.98■□□□□ 0.31
COX6A1-203ENST00000550009 NCOA4Q13772 614 aa16.98■□□□□ 0.31
COX6A1-203ENST00000550009 CCINQ13939 588 aa16.98■□□□□ 0.31
COX6A1-203ENST00000550009 ZNF77Q15935 545 aa16.98■□□□□ 0.31
COX6A1-203ENST00000550009 ITPRIPL2Q3MIP1 535 aa16.98■□□□□ 0.31
COX6A1-203ENST00000550009 CEP135Q66GS9 1140 aa16.98■□□□□ 0.31
COX6A1-203ENST00000550009 HEATR6Q6AI08 1181 aaKnown RBP16.98■□□□□ 0.31
COX6A1-203ENST00000550009 FSTL4Q6MZW2 842 aa16.98■□□□□ 0.31
COX6A1-203ENST00000550009 SPATA18Q8TC71 538 aa16.98■□□□□ 0.31
COX6A1-203ENST00000550009 EZH1Q92800 747 aaPredicted RBP16.98■□□□□ 0.31
COX6A1-203ENST00000550009 FUBP3Q96I24 572 aaKnown RBP eCLIP16.98■□□□□ 0.31
COX6A1-203ENST00000550009 KCNK16Q96T55 309 aa16.98■□□□□ 0.31
COX6A1-203ENST00000550009 RNF38Q9H0F5 515 aa16.98■□□□□ 0.31
COX6A1-203ENST00000550009 C8orf33Q9H7E9 229 aaPredicted RBP16.98■□□□□ 0.31
COX6A1-203ENST00000550009 ZSCAN32Q9NX65 697 aa16.98■□□□□ 0.31
COX6A1-203ENST00000550009 CHURC1-FNTBB4DL54 471 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms