RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 VPS11Q9H270 941 aa9.63□□□□□ -0.87
PPFIA2-216ENST00000549396 PTCH2Q9Y6C5 1203 aa9.63□□□□□ -0.87
PPFIA2-216ENST00000549396 SLC4A7Q9Y6M7 1214 aa9.63□□□□□ -0.87
PPFIA2-216ENST00000549396 CFAP73A6NFT4 308 aa9.63□□□□□ -0.87
PPFIA2-216ENST00000549396 TIMM44O43615 452 aa9.63□□□□□ -0.87
PPFIA2-216ENST00000549396 MMEP08473 750 aa9.63□□□□□ -0.87
PPFIA2-216ENST00000549396 SARSP49591 514 aaKnown RBP9.63□□□□□ -0.87
PPFIA2-216ENST00000549396 ZNF200P98182 395 aaPredicted RBP9.63□□□□□ -0.87
PPFIA2-216ENST00000549396 NUDCD3Q8IVD9 361 aa9.63□□□□□ -0.87
PPFIA2-216ENST00000549396 CPA5Q8WXQ8 436 aa9.63□□□□□ -0.87
PPFIA2-216ENST00000549396 NRBF2Q96F24 287 aa9.63□□□□□ -0.87
PPFIA2-216ENST00000549396 CAMKK2Q96RR4 588 aa9.63□□□□□ -0.87
PPFIA2-216ENST00000549396 FDXACB1Q9BRP7 624 aaPredicted RBP9.63□□□□□ -0.87
PPFIA2-216ENST00000549396 ZC3H7BQ9UGR2 993 aaKnown RBP9.63□□□□□ -0.87
PPFIA2-216ENST00000549396 FGF10O15520 208 aaPredicted RBP9.63□□□□□ -0.87
PPFIA2-216ENST00000549396 ESRRBO95718 433 aa9.63□□□□□ -0.87
PPFIA2-216ENST00000549396 PDGFRBP09619 1106 aa9.63□□□□□ -0.87
PPFIA2-216ENST00000549396 MBL2P11226 248 aaPredicted RBP9.63□□□□□ -0.87
PPFIA2-216ENST00000549396 SLC9A1P19634 815 aa9.63□□□□□ -0.87
PPFIA2-216ENST00000549396 HTR7P34969 479 aa9.63□□□□□ -0.87
PPFIA2-216ENST00000549396 MORF4L2Q15014 288 aa9.63□□□□□ -0.87
PPFIA2-216ENST00000549396 HIST2H2ACQ16777 129 aaPredicted RBP9.63□□□□□ -0.87
PPFIA2-216ENST00000549396 KIF19Q2TAC6 998 aa9.63□□□□□ -0.87
PPFIA2-216ENST00000549396 TFDP3Q5H9I0 405 aa9.63□□□□□ -0.87
PPFIA2-216ENST00000549396 PPP1R15BQ5SWA1 713 aa9.63□□□□□ -0.87
PPFIA2-216ENST00000549396 HIST2H2AA3Q6FI13 130 aa9.63□□□□□ -0.87
PPFIA2-216ENST00000549396 LRRC52Q8N7C0 313 aa9.63□□□□□ -0.87
PPFIA2-216ENST00000549396 TPCN2Q8NHX9 752 aa9.63□□□□□ -0.87
PPFIA2-216ENST00000549396 ACTRT1Q8TDG2 376 aa9.63□□□□□ -0.87
PPFIA2-216ENST00000549396 CYFIP2Q96F07 1278 aa9.63□□□□□ -0.87
PPFIA2-216ENST00000549396 ZCCHC2Q9C0B9 1178 aaKnown RBP9.63□□□□□ -0.87
PPFIA2-216ENST00000549396 TMEM117Q9H0C3 514 aa9.63□□□□□ -0.87
PPFIA2-216ENST00000549396 LRRC4BQ9NT99 713 aa9.63□□□□□ -0.87
PPFIA2-216ENST00000549396 ATRNL1Q5VV63 1379 aa9.63□□□□□ -0.87
PPFIA2-216ENST00000549396 ZNF839A8K0R7 811 aa9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 SNRPAP09012 282 aaKnown RBP9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 COMTP21964 271 aa9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 UBA1P22314 1058 aaKnown RBP9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 CCR1P32246 355 aa9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 OOSP2Q86WS3 158 aa9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 TAB3Q8N5C8 712 aaPredicted RBP9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 UHMK1Q8TAS1 419 aaKnown RBP9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 PTPRN2Q92932 1015 aa9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 HSFY1Q96LI6 401 aa9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 C1QTNF7Q9BXJ2 289 aa9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 CDH9Q9ULB4 789 aa9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 Q9Y3F1 56 aa9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 ALG6Q9Y672 507 aa9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 OR6C75A6NL08 312 aa9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 H0Y626 953 aa9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 HNRNPRO43390 633 aaKnown RBP9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 SRGAP2O75044 1071 aa9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 GYPCP04921 128 aa9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 ASGR1P07306 291 aa9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 SLC12A3P55017 1021 aa9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 EFTUD2Q15029 972 aaKnown RBP eCLIP9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 NUGGCQ68CJ6 796 aa9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 ARMC6Q6NXE6 501 aa9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 SLC13A5Q86YT5 568 aaPredicted RBP9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 COG1Q8WTW3 980 aa9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 CHMP6Q96FZ7 201 aa9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 ZNF558Q96NG5 402 aa9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 F8VZ95 297 aa9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 ZNF263O14978 683 aa9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 BNIP3LO60238 219 aa9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 ATP5BP06576 529 aaKnown RBP9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 MAPK1P28482 360 aa9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 CCZ1BP86790 482 aa9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 CCZ1P86791 482 aaPredicted RBP9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 GRIK3Q13003 919 aa9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 LMBRD2Q68DH5 695 aaPredicted RBP9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 EIF1ADQ8N9N8 165 aaKnown RBP9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 ABI2Q9NYB9 513 aaPredicted RBP9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 XPO7Q9UIA9 1087 aaKnown RBP9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 GRID1Q9ULK0 1009 aa9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 ERI2A8K979 691 aaKnown RBP9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 SOAT2O75908 522 aa9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 PTGER2P43116 358 aa9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 SPATA18Q8TC71 538 aa9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 KLHL29Q96CT2 875 aa9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 MTMR12Q9C0I1 747 aa9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 GIMAP4Q9NUV9 329 aa9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.62□□□□□ -0.87
PPFIA2-216ENST00000549396 SF3B1O75533 1304 aaKnown RBP eCLIP9.61□□□□□ -0.87
PPFIA2-216ENST00000549396 M0QYT0 321 aa9.61□□□□□ -0.87
PPFIA2-216ENST00000549396 MYCP01106 439 aaPredicted RBP9.61□□□□□ -0.87
PPFIA2-216ENST00000549396 RGS7P49802 495 aa9.61□□□□□ -0.87
PPFIA2-216ENST00000549396 KBTBD12Q3ZCT8 623 aa9.61□□□□□ -0.87
PPFIA2-216ENST00000549396 DUSP28Q4G0W2 176 aa9.61□□□□□ -0.87
PPFIA2-216ENST00000549396 PDCD7Q8N8D1 485 aaKnown RBP9.61□□□□□ -0.87
PPFIA2-216ENST00000549396 SERPINB12Q96P63 405 aa9.61□□□□□ -0.87
PPFIA2-216ENST00000549396 PDGFCQ9NRA1 345 aa9.61□□□□□ -0.87
PPFIA2-216ENST00000549396 CISHQ9NSE2 258 aa9.61□□□□□ -0.87
PPFIA2-216ENST00000549396 DDIT4Q9NX09 232 aa9.61□□□□□ -0.87
PPFIA2-216ENST00000549396 MOSPD1Q9UJG1 213 aa9.61□□□□□ -0.87
PPFIA2-216ENST00000549396 ATP11BQ9Y2G3 1177 aa9.61□□□□□ -0.87
PPFIA2-216ENST00000549396 NEU2Q9Y3R4 380 aa9.61□□□□□ -0.87
PPFIA2-216ENST00000549396 TRIM17Q9Y577 477 aa9.61□□□□□ -0.87
PPFIA2-216ENST00000549396 MOXD2PA6NHM9 499 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms