RNA–Protein interactions for RNA: ENST00000549220.5

EFCAB2-215, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 4

Gene EFCAB2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-215ENST00000549220 VTI1BQ9UEU0 232 aa6.43□□□□□ -1.38
EFCAB2-215ENST00000549220 KCNH3Q9ULD8 1083 aa6.43□□□□□ -1.38
EFCAB2-215ENST00000549220 GDAQ9Y2T3 454 aa6.43□□□□□ -1.38
EFCAB2-215ENST00000549220 POLR3KQ9Y2Y1 108 aaPredicted RBP6.43□□□□□ -1.38
EFCAB2-215ENST00000549220 PCDHB2Q9Y5E7 798 aa6.43□□□□□ -1.38
EFCAB2-215ENST00000549220 MRPL42Q9Y6G3 142 aaKnown RBP6.43□□□□□ -1.38
EFCAB2-215ENST00000549220 PHLPP2Q6ZVD8 1323 aa6.43□□□□□ -1.38
EFCAB2-215ENST00000549220 TSC2P49815 1807 aa6.43□□□□□ -1.38
EFCAB2-215ENST00000549220 CDH23Q9H251 3354 aa6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 EPOPA6NHQ4 379 aa6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 N4BP3O15049 544 aa6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 SLC26A4O43511 780 aa6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 ZC3H11AO75152 810 aaKnown RBP eCLIP6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 LRRN2O75325 713 aa6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 DGKIO75912 1065 aa6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 GCNT3O95395 438 aa6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 POMCP01189 267 aa6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 C1QTNF9P0C862 333 aa6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 ITGA4P13612 1032 aa6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 PLS3P13797 630 aa6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 FOSL2P15408 326 aa6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 ATF7P17544 494 aaPredicted RBP6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 GUCY2CP25092 1073 aa6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 MLH1P40692 756 aa6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 SYKP43405 635 aa6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 KRTAP19-4Q3LI73 84 aa6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 ZNF568Q3ZCX4 644 aa6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 SEZ6Q53EL9 994 aa6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 ZC2HC1CQ53FD0 456 aaPredicted RBP6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 CLLU1OSQ5K130 101 aa6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 UBXN11Q5T124 520 aa6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 NT5DC1Q5TFE4 455 aa6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 ATF7IP2Q5U623 682 aa6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 EEF1DP3Q658K8 133 aa6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 CDCA2Q69YH5 1023 aaPredicted RBP6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 SLC27A1Q6PCB7 646 aa6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 TMPRSS7Q7RTY8 843 aa6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 HAUS6Q7Z4H7 955 aa6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 THNSL1Q8IYQ7 743 aa6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 IQUBQ8NA54 791 aa6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 DTWD2Q8NBA8 298 aa6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 MRPS27Q92552 414 aaKnown RBP6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 HPS3Q969F9 1004 aa6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 ZBTB45Q96K62 511 aaPredicted RBP6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 GUCD1Q96NT3 240 aa6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 FAM193BQ96PV7 902 aaPredicted RBP6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 TGS1Q96RS0 853 aaKnown RBP6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 CDX2Q99626 313 aaPredicted RBP6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 ADPGKQ9BRR6 497 aa6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 TIPINQ9BVW5 301 aa6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 TARS2Q9BW92 718 aaKnown RBP6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 MRPL4Q9BYD3 311 aaKnown RBP6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 GOLPH3LQ9H4A5 285 aa6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 PDZD7Q9H5P4 517 aa6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 MRPL44Q9H9J2 332 aaKnown RBP6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 PARVGQ9HBI0 331 aa6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 PANK4Q9NVE7 773 aa6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 TMEM161AQ9NX61 479 aa6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 LARSQ9P2J5 1176 aaKnown RBP6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 ODF2LQ9ULJ1 636 aa6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 IPPQ9Y573 584 aa6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 CNTNAP2Q9UHC6 1331 aa6.42□□□□□ -1.38
EFCAB2-215ENST00000549220 EYSQ5T1H1 3165 aa6.41□□□□□ -1.38
EFCAB2-215ENST00000549220 A0A0U1RQF3 1178 aa6.41□□□□□ -1.38
EFCAB2-215ENST00000549220 NT5C1B-RDH14C9J2C7 533 aa6.41□□□□□ -1.38
EFCAB2-215ENST00000549220 ACKR2O00590 384 aa6.41□□□□□ -1.38
EFCAB2-215ENST00000549220 HNRNPDLO14979 420 aaKnown RBP6.41□□□□□ -1.38
EFCAB2-215ENST00000549220 MYBP10242 640 aa6.41□□□□□ -1.38
EFCAB2-215ENST00000549220 CMA1P23946 247 aa6.41□□□□□ -1.38
EFCAB2-215ENST00000549220 AXLP30530 894 aa6.41□□□□□ -1.38
EFCAB2-215ENST00000549220 HOXA11P31270 313 aaPredicted RBP6.41□□□□□ -1.38
EFCAB2-215ENST00000549220 LIG4P49917 911 aa6.41□□□□□ -1.38
EFCAB2-215ENST00000549220 RAB27AP51159 221 aa6.41□□□□□ -1.38
EFCAB2-215ENST00000549220 SCNN1GP51170 649 aa6.41□□□□□ -1.38
EFCAB2-215ENST00000549220 NDUFA8P51970 172 aa6.41□□□□□ -1.38
EFCAB2-215ENST00000549220 EFNA5P52803 228 aa6.41□□□□□ -1.38
EFCAB2-215ENST00000549220 HTRA4P83105 476 aaPredicted RBP6.41□□□□□ -1.38
EFCAB2-215ENST00000549220 AMPD3Q01432 767 aa6.41□□□□□ -1.38
EFCAB2-215ENST00000549220 LMNB2Q03252 620 aa6.41□□□□□ -1.38
EFCAB2-215ENST00000549220 COASYQ13057 564 aa6.41□□□□□ -1.38
EFCAB2-215ENST00000549220 GPM6BQ13491 265 aa6.41□□□□□ -1.38
EFCAB2-215ENST00000549220 CUL4BQ13620 913 aa6.41□□□□□ -1.38
EFCAB2-215ENST00000549220 EPC2Q52LR7 807 aa6.41□□□□□ -1.38
EFCAB2-215ENST00000549220 HERC4Q5GLZ8 1057 aaPredicted RBP6.41□□□□□ -1.38
EFCAB2-215ENST00000549220 L1TD1Q5T7N2 865 aaKnown RBP6.41□□□□□ -1.38
EFCAB2-215ENST00000549220 ADALQ6DHV7 355 aa6.41□□□□□ -1.38
EFCAB2-215ENST00000549220 GLB1LQ6UWU2 654 aa6.41□□□□□ -1.38
EFCAB2-215ENST00000549220 EP400NLQ6ZTU2 488 aa6.41□□□□□ -1.38
EFCAB2-215ENST00000549220 CCDC65Q8IXS2 484 aa6.41□□□□□ -1.38
EFCAB2-215ENST00000549220 TMEM192Q8IY95 271 aa6.41□□□□□ -1.38
EFCAB2-215ENST00000549220 CMTR2Q8IYT2 770 aaKnown RBP6.41□□□□□ -1.38
EFCAB2-215ENST00000549220 HACE1Q8IYU2 909 aa6.41□□□□□ -1.38
EFCAB2-215ENST00000549220 SYCP3Q8IZU3 236 aa6.41□□□□□ -1.38
EFCAB2-215ENST00000549220 TMEM161BQ8NDZ6 487 aa6.41□□□□□ -1.38
EFCAB2-215ENST00000549220 URGCPQ8TCY9 931 aa6.41□□□□□ -1.38
EFCAB2-215ENST00000549220 CYB5D2Q8WUJ1 264 aa6.41□□□□□ -1.38
EFCAB2-215ENST00000549220 RABGGTAQ92696 567 aa6.41□□□□□ -1.38
EFCAB2-215ENST00000549220 PGBD4Q96DM1 585 aa6.41□□□□□ -1.38
EFCAB2-215ENST00000549220 IPO9Q96P70 1041 aaKnown RBP6.41□□□□□ -1.38
EFCAB2-215ENST00000549220 CASD1Q96PB1 797 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms