RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 INSL5Q9Y5Q6 135 aa16.85■□□□□ 0.29
CHMP1A-206ENST00000549139 PPP1R3GB7ZBB8 358 aa16.84■□□□□ 0.29
CHMP1A-206ENST00000549139 BIN1O00499 593 aa16.84■□□□□ 0.29
CHMP1A-206ENST00000549139 PRRG1O14668 218 aa16.84■□□□□ 0.29
CHMP1A-206ENST00000549139 CD44P16070 742 aaKnown RBP16.84■□□□□ 0.29
CHMP1A-206ENST00000549139 HOXC13P31276 330 aa16.84■□□□□ 0.29
CHMP1A-206ENST00000549139 VAMP7P51809 220 aa16.84■□□□□ 0.29
CHMP1A-206ENST00000549139 PMS1P54277 932 aaKnown RBP16.84■□□□□ 0.29
CHMP1A-206ENST00000549139 ARPP19P56211 112 aa16.84■□□□□ 0.29
CHMP1A-206ENST00000549139 BFSP1Q12934 665 aa16.84■□□□□ 0.29
CHMP1A-206ENST00000549139 WSCD1Q658N2 575 aa16.84■□□□□ 0.29
CHMP1A-206ENST00000549139 FOXR2Q6PJQ5 311 aa16.84■□□□□ 0.29
CHMP1A-206ENST00000549139 PDZD4Q76G19 769 aaPredicted RBP16.84■□□□□ 0.29
CHMP1A-206ENST00000549139 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.84■□□□□ 0.29
CHMP1A-206ENST00000549139 MFSD6LQ8IWD5 586 aa16.84■□□□□ 0.29
CHMP1A-206ENST00000549139 ZC3H3Q8IXZ2 948 aaKnown RBP16.84■□□□□ 0.29
CHMP1A-206ENST00000549139 FAM186BQ8IYM0 893 aa16.84■□□□□ 0.29
CHMP1A-206ENST00000549139 HS6ST3Q8IZP7 471 aa16.84■□□□□ 0.29
CHMP1A-206ENST00000549139 THEM5Q8N1Q8 247 aa16.84■□□□□ 0.29
CHMP1A-206ENST00000549139 TMEM86AQ8N2M4 240 aa16.84■□□□□ 0.29
CHMP1A-206ENST00000549139 FAM160A2Q8N612 972 aaPredicted RBP16.84■□□□□ 0.29
CHMP1A-206ENST00000549139 SPATA18Q8TC71 538 aa16.84■□□□□ 0.29
CHMP1A-206ENST00000549139 RSPRY1Q96DX4 576 aa16.84■□□□□ 0.29
CHMP1A-206ENST00000549139 HPDLQ96IR7 371 aa16.84■□□□□ 0.29
CHMP1A-206ENST00000549139 CLSTN2Q9H4D0 955 aa16.84■□□□□ 0.29
CHMP1A-206ENST00000549139 CYP4F11Q9HBI6 524 aa16.84■□□□□ 0.29
CHMP1A-206ENST00000549139 RBM12Q9NTZ6 932 aaKnown RBP16.84■□□□□ 0.29
CHMP1A-206ENST00000549139 CEP72Q9P209 647 aa16.84■□□□□ 0.29
CHMP1A-206ENST00000549139 LAMA1P25391 3075 aa16.84■□□□□ 0.29
CHMP1A-206ENST00000549139 ZNF263O14978 683 aa16.83■□□□□ 0.28
CHMP1A-206ENST00000549139 HUS1O60921 280 aa16.83■□□□□ 0.28
CHMP1A-206ENST00000549139 STAU1O95793 577 aaKnown RBP16.83■□□□□ 0.28
CHMP1A-206ENST00000549139 KRT13P13646 458 aa16.83■□□□□ 0.28
CHMP1A-206ENST00000549139 HOXA6P31267 233 aa16.83■□□□□ 0.28
CHMP1A-206ENST00000549139 ATICP31939 592 aa16.83■□□□□ 0.28
CHMP1A-206ENST00000549139 DLG4P78352 724 aa16.83■□□□□ 0.28
CHMP1A-206ENST00000549139 GPR17Q13304 367 aa16.83■□□□□ 0.28
CHMP1A-206ENST00000549139 TRPC3Q13507 836 aa16.83■□□□□ 0.28
CHMP1A-206ENST00000549139 CYP4A22Q5TCH4 519 aa16.83■□□□□ 0.28
CHMP1A-206ENST00000549139 Q6ZS52 159 aa16.83■□□□□ 0.28
CHMP1A-206ENST00000549139 TOP6BLQ8N6T0 577 aa16.83■□□□□ 0.28
CHMP1A-206ENST00000549139 ZSCAN18Q8TBC5 510 aaPredicted RBP16.83■□□□□ 0.28
CHMP1A-206ENST00000549139 MSANTD3Q96H12 275 aa16.83■□□□□ 0.28
CHMP1A-206ENST00000549139 AFF4Q9UHB7 1163 aaKnown RBP16.83■□□□□ 0.28
CHMP1A-206ENST00000549139 SNX9Q9Y5X1 595 aa16.83■□□□□ 0.28
CHMP1A-206ENST00000549139 SPEGQ15772 3267 aa16.83■□□□□ 0.28
CHMP1A-206ENST00000549139 TRIM49BA6NDI0 452 aa16.82■□□□□ 0.28
CHMP1A-206ENST00000549139 HEPACAM2A8MVW5 462 aa16.82■□□□□ 0.28
CHMP1A-206ENST00000549139 PHACTR2O75167 634 aa16.82■□□□□ 0.28
CHMP1A-206ENST00000549139 FAM163BP0C2L3 166 aa16.82■□□□□ 0.28
CHMP1A-206ENST00000549139 EPB41P11171 864 aaKnown RBP16.82■□□□□ 0.28
CHMP1A-206ENST00000549139 CPB1P15086 417 aa16.82■□□□□ 0.28
CHMP1A-206ENST00000549139 GJA1P17302 382 aa16.82■□□□□ 0.28
CHMP1A-206ENST00000549139 ZACNQ401N2 412 aa16.82■□□□□ 0.28
CHMP1A-206ENST00000549139 C1orf220Q5T0J3 134 aa16.82■□□□□ 0.28
CHMP1A-206ENST00000549139 TDRD10Q5VZ19 366 aaKnown RBP16.82■□□□□ 0.28
CHMP1A-206ENST00000549139 LIMS2Q7Z4I7 341 aa16.82■□□□□ 0.28
CHMP1A-206ENST00000549139 PDCL2Q8N4E4 241 aa16.82■□□□□ 0.28
CHMP1A-206ENST00000549139 NUP62CLQ9H1M0 184 aa16.82■□□□□ 0.28
CHMP1A-206ENST00000549139 RXFP3Q9NSD7 469 aa16.82■□□□□ 0.28
CHMP1A-206ENST00000549139 L1RE1Q9UN81 338 aa16.82■□□□□ 0.28
CHMP1A-206ENST00000549139 BICDL2A1A5D9 508 aa16.81■□□□□ 0.28
CHMP1A-206ENST00000549139 GABRDO14764 452 aa16.81■□□□□ 0.28
CHMP1A-206ENST00000549139 SOX9P48436 509 aa16.81■□□□□ 0.28
CHMP1A-206ENST00000549139 LHX1P48742 406 aa16.81■□□□□ 0.28
CHMP1A-206ENST00000549139 MYL6P60660 151 aa16.81■□□□□ 0.28
CHMP1A-206ENST00000549139 FCHO2Q0JRZ9 810 aa16.81■□□□□ 0.28
CHMP1A-206ENST00000549139 BIRC3Q13489 604 aa16.81■□□□□ 0.28
CHMP1A-206ENST00000549139 LRRC32Q14392 662 aa16.81■□□□□ 0.28
CHMP1A-206ENST00000549139 SOWAHAQ2M3V2 549 aa16.81■□□□□ 0.28
CHMP1A-206ENST00000549139 HEATR6Q6AI08 1181 aaKnown RBP16.81■□□□□ 0.28
CHMP1A-206ENST00000549139 IL31Q6EBC2 164 aa16.81■□□□□ 0.28
CHMP1A-206ENST00000549139 C1orf228Q6PIY5 440 aa16.81■□□□□ 0.28
CHMP1A-206ENST00000549139 TXNDC11Q6PKC3 985 aa16.81■□□□□ 0.28
CHMP1A-206ENST00000549139 RNF19BQ6ZMZ0 732 aa16.81■□□□□ 0.28
CHMP1A-206ENST00000549139 SV2AQ7L0J3 742 aa16.81■□□□□ 0.28
CHMP1A-206ENST00000549139 LEMD2Q8NC56 503 aa16.81■□□□□ 0.28
CHMP1A-206ENST00000549139 SHKBP1Q8TBC3 707 aa16.81■□□□□ 0.28
CHMP1A-206ENST00000549139 NELFBQ8WX92 580 aa16.81■□□□□ 0.28
CHMP1A-206ENST00000549139 SYAP1Q96A49 352 aaPredicted RBP16.81■□□□□ 0.28
CHMP1A-206ENST00000549139 LRRC3Q9BY71 257 aa16.81■□□□□ 0.28
CHMP1A-206ENST00000549139 ZCWPW1Q9H0M4 648 aa16.81■□□□□ 0.28
CHMP1A-206ENST00000549139 VRTNQ9H8Y1 702 aa16.81■□□□□ 0.28
CHMP1A-206ENST00000549139 MYBPHLA2RUH7 354 aa16.8■□□□□ 0.28
CHMP1A-206ENST00000549139 CHADO15335 359 aa16.8■□□□□ 0.28
CHMP1A-206ENST00000549139 SLC16A3O15427 465 aaKnown RBP16.8■□□□□ 0.28
CHMP1A-206ENST00000549139 VNN1O95497 513 aa16.8■□□□□ 0.28
CHMP1A-206ENST00000549139 OR4Q2P0C623 313 aa16.8■□□□□ 0.28
CHMP1A-206ENST00000549139 GTF2H1P32780 548 aa16.8■□□□□ 0.28
CHMP1A-206ENST00000549139 TWF1Q12792 350 aa16.8■□□□□ 0.28
CHMP1A-206ENST00000549139 SMARCB1Q12824 385 aa16.8■□□□□ 0.28
CHMP1A-206ENST00000549139 SF3A2Q15428 464 aaKnown RBP16.8■□□□□ 0.28
CHMP1A-206ENST00000549139 TEAD2Q15562 447 aa16.8■□□□□ 0.28
CHMP1A-206ENST00000549139 IQCEQ6IPM2 695 aa16.8■□□□□ 0.28
CHMP1A-206ENST00000549139 KLHL10Q6JEL2 608 aa16.8■□□□□ 0.28
CHMP1A-206ENST00000549139 TTI2Q6NXR4 508 aa16.8■□□□□ 0.28
CHMP1A-206ENST00000549139 FILIP1Q7Z7B0 1213 aa16.8■□□□□ 0.28
CHMP1A-206ENST00000549139 WDR5BQ86VZ2 330 aa16.8■□□□□ 0.28
CHMP1A-206ENST00000549139 OR10T2Q8NGX3 314 aa16.8■□□□□ 0.28
CHMP1A-206ENST00000549139 GPT2Q8TD30 523 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms