RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 RAD51AP2Q09MP3 1159 aa15.15■□□□□ 0.02
PTCH1-217ENST00000548420 LY6DQ14210 128 aa15.15■□□□□ 0.02
PTCH1-217ENST00000548420 UPP1Q16831 310 aa15.15■□□□□ 0.02
PTCH1-217ENST00000548420 TTC30AQ86WT1 665 aa15.15■□□□□ 0.02
PTCH1-217ENST00000548420 TMEM161BQ8NDZ6 487 aa15.15■□□□□ 0.02
PTCH1-217ENST00000548420 BAHD1Q8TBE0 780 aaPredicted RBP15.15■□□□□ 0.02
PTCH1-217ENST00000548420 USP33Q8TEY7 942 aa15.15■□□□□ 0.02
PTCH1-217ENST00000548420 LARP4BQ92615 738 aaKnown RBP15.15■□□□□ 0.02
PTCH1-217ENST00000548420 ACO2Q99798 780 aaKnown RBP15.15■□□□□ 0.02
PTCH1-217ENST00000548420 PTPRHQ9HD43 1115 aa15.15■□□□□ 0.02
PTCH1-217ENST00000548420 KMT5AQ9NQR1 393 aa15.15■□□□□ 0.02
PTCH1-217ENST00000548420 STK17AQ9UEE5 414 aa15.15■□□□□ 0.02
PTCH1-217ENST00000548420 AFF4Q9UHB7 1163 aaKnown RBP15.15■□□□□ 0.02
PTCH1-217ENST00000548420 CIZ1Q9ULV3 898 aaPredicted RBP15.15■□□□□ 0.02
PTCH1-217ENST00000548420 TNFSF13BQ9Y275 285 aa15.15■□□□□ 0.02
PTCH1-217ENST00000548420 USP20Q9Y2K6 914 aa15.15■□□□□ 0.02
PTCH1-217ENST00000548420 ZDHHC9Q9Y397 364 aa15.15■□□□□ 0.02
PTCH1-217ENST00000548420 RECQL4O94761 1208 aa15.14■□□□□ 0.01
PTCH1-217ENST00000548420 PROZP22891 400 aa15.14■□□□□ 0.01
PTCH1-217ENST00000548420 WEE1P30291 646 aa15.14■□□□□ 0.01
PTCH1-217ENST00000548420 STK38Q15208 465 aa15.14■□□□□ 0.01
PTCH1-217ENST00000548420 CRY1Q16526 586 aa15.14■□□□□ 0.01
PTCH1-217ENST00000548420 TAF1BQ53T94 588 aaPredicted RBP15.14■□□□□ 0.01
PTCH1-217ENST00000548420 FOXD4L5Q5VV16 416 aaPredicted RBP15.14■□□□□ 0.01
PTCH1-217ENST00000548420 EEF1DP3Q658K8 133 aa15.14■□□□□ 0.01
PTCH1-217ENST00000548420 LRRC69Q6ZNQ3 347 aa15.14■□□□□ 0.01
PTCH1-217ENST00000548420 GPBP1Q86WP2 473 aa15.14■□□□□ 0.01
PTCH1-217ENST00000548420 CCDC33Q8N5R6 958 aa15.14■□□□□ 0.01
PTCH1-217ENST00000548420 ZNF513Q8N8E2 541 aaPredicted RBP15.14■□□□□ 0.01
PTCH1-217ENST00000548420 FOXD4L4Q8WXT5 416 aaPredicted RBP15.14■□□□□ 0.01
PTCH1-217ENST00000548420 REEP2Q9BRK0 252 aa15.14■□□□□ 0.01
PTCH1-217ENST00000548420 ATXN3LQ9H3M9 355 aa15.14■□□□□ 0.01
PTCH1-217ENST00000548420 LARSQ9P2J5 1176 aaKnown RBP15.14■□□□□ 0.01
PTCH1-217ENST00000548420 CCDC39Q9UFE4 941 aa15.14■□□□□ 0.01
PTCH1-217ENST00000548420 CCL26Q9Y258 94 aa15.14■□□□□ 0.01
PTCH1-217ENST00000548420 RELNP78509 3460 aa15.13■□□□□ 0.01
PTCH1-217ENST00000548420 AHCTF1Q8WYP5 2266 aa15.13■□□□□ 0.01
PTCH1-217ENST00000548420 A0A087X0B3 334 aa15.13■□□□□ 0.01
PTCH1-217ENST00000548420 PLK4O00444 970 aa15.13■□□□□ 0.01
PTCH1-217ENST00000548420 ABLIM1O14639 778 aa15.13■□□□□ 0.01
PTCH1-217ENST00000548420 SLC16A4O15374 487 aa15.13■□□□□ 0.01
PTCH1-217ENST00000548420 MAPTP10636 758 aaKnown RBP15.13■□□□□ 0.01
PTCH1-217ENST00000548420 C6P13671 934 aa15.13■□□□□ 0.01
PTCH1-217ENST00000548420 DPP6P42658 865 aa15.13■□□□□ 0.01
PTCH1-217ENST00000548420 SMTNP53814 917 aa15.13■□□□□ 0.01
PTCH1-217ENST00000548420 NCKAP1LP55160 1127 aa15.13■□□□□ 0.01
PTCH1-217ENST00000548420 CYP4F8P98187 520 aa15.13■□□□□ 0.01
PTCH1-217ENST00000548420 C2orf27AQ580R0 203 aa15.13■□□□□ 0.01
PTCH1-217ENST00000548420 GLRA4Q5JXX5 417 aa15.13■□□□□ 0.01
PTCH1-217ENST00000548420 SPDYCQ5MJ68 293 aa15.13■□□□□ 0.01
PTCH1-217ENST00000548420 ATF7IP2Q5U623 682 aa15.13■□□□□ 0.01
PTCH1-217ENST00000548420 RRAGBQ5VZM2 374 aa15.13■□□□□ 0.01
PTCH1-217ENST00000548420 SPATA18Q8TC71 538 aa15.13■□□□□ 0.01
PTCH1-217ENST00000548420 PPP1R10Q96QC0 940 aaKnown RBP15.13■□□□□ 0.01
PTCH1-217ENST00000548420 FIZ1Q96SL8 496 aa15.13■□□□□ 0.01
PTCH1-217ENST00000548420 ARID3AQ99856 593 aa15.13■□□□□ 0.01
PTCH1-217ENST00000548420 SLC46A2Q9BY10 475 aa15.13■□□□□ 0.01
PTCH1-217ENST00000548420 THG1LQ9NWX6 298 aaKnown RBP15.13■□□□□ 0.01
PTCH1-217ENST00000548420 IL17BQ9UHF5 180 aa15.13■□□□□ 0.01
PTCH1-217ENST00000548420 RCOR1Q9UKL0 485 aa15.13■□□□□ 0.01
PTCH1-217ENST00000548420 CABIN1Q9Y6J0 2220 aa15.12■□□□□ 0.01
PTCH1-217ENST00000548420 K7EQS6 105 aa15.12■□□□□ 0.01
PTCH1-217ENST00000548420 CUTAO60888 179 aa15.12■□□□□ 0.01
PTCH1-217ENST00000548420 CHRM1P11229 460 aaPredicted RBP15.12■□□□□ 0.01
PTCH1-217ENST00000548420 SCP2P22307 547 aa15.12■□□□□ 0.01
PTCH1-217ENST00000548420 TXLNAP40222 546 aa15.12■□□□□ 0.01
PTCH1-217ENST00000548420 SOX4Q06945 474 aaPredicted RBP15.12■□□□□ 0.01
PTCH1-217ENST00000548420 DHX8Q14562 1220 aaKnown RBP15.12■□□□□ 0.01
PTCH1-217ENST00000548420 DCAF4L1Q3SXM0 396 aa15.12■□□□□ 0.01
PTCH1-217ENST00000548420 CCDC73Q6ZRK6 1079 aa15.12■□□□□ 0.01
PTCH1-217ENST00000548420 GALNT15Q8N3T1 639 aa15.12■□□□□ 0.01
PTCH1-217ENST00000548420 BEST2Q8NFU1 509 aa15.12■□□□□ 0.01
PTCH1-217ENST00000548420 RASSF8Q8NHQ8 419 aa15.12■□□□□ 0.01
PTCH1-217ENST00000548420 CD101Q93033 1021 aa15.12■□□□□ 0.01
PTCH1-217ENST00000548420 DNAJC19Q96DA6 116 aa15.12■□□□□ 0.01
PTCH1-217ENST00000548420 ADPGKQ9BRR6 497 aa15.12■□□□□ 0.01
PTCH1-217ENST00000548420 MRPL4Q9BYD3 311 aaKnown RBP15.12■□□□□ 0.01
PTCH1-217ENST00000548420 TRIM4Q9C037 500 aa15.12■□□□□ 0.01
PTCH1-217ENST00000548420 TASP1Q9H6P5 420 aa15.12■□□□□ 0.01
PTCH1-217ENST00000548420 MMP17Q9ULZ9 603 aa15.12■□□□□ 0.01
PTCH1-217ENST00000548420 MYH11P35749 1972 aa15.12■□□□□ 0.01
PTCH1-217ENST00000548420 MYMKA6NI61 221 aa15.11■□□□□ 0.01
PTCH1-217ENST00000548420 GOLGA8CPA6NN73 597 aa15.11■□□□□ 0.01
PTCH1-217ENST00000548420 H0YCG3 227 aa15.11■□□□□ 0.01
PTCH1-217ENST00000548420 LIG1P18858 919 aa15.11■□□□□ 0.01
PTCH1-217ENST00000548420 GABRR2P28476 465 aa15.11■□□□□ 0.01
PTCH1-217ENST00000548420 SEC13P55735 322 aa15.11■□□□□ 0.01
PTCH1-217ENST00000548420 CXADRP78310 365 aa15.11■□□□□ 0.01
PTCH1-217ENST00000548420 SMAD1Q15797 465 aaKnown RBP15.11■□□□□ 0.01
PTCH1-217ENST00000548420 CTXN3Q4LDR2 81 aa15.11■□□□□ 0.01
PTCH1-217ENST00000548420 SHC4Q6S5L8 630 aa15.11■□□□□ 0.01
PTCH1-217ENST00000548420 DNAJB7Q7Z6W7 309 aaPredicted RBP15.11■□□□□ 0.01
PTCH1-217ENST00000548420 SLC41A1Q8IVJ1 513 aa15.11■□□□□ 0.01
PTCH1-217ENST00000548420 WBP1Q96G27 269 aa15.11■□□□□ 0.01
PTCH1-217ENST00000548420 TARS2Q9BW92 718 aaKnown RBP15.11■□□□□ 0.01
PTCH1-217ENST00000548420 ST6GALNAC4Q9H4F1 302 aa15.11■□□□□ 0.01
PTCH1-217ENST00000548420 PRDM16Q9HAZ2 1276 aa15.11■□□□□ 0.01
PTCH1-217ENST00000548420 IL21RQ9HBE5 538 aa15.11■□□□□ 0.01
PTCH1-217ENST00000548420 PARVGQ9HBI0 331 aa15.11■□□□□ 0.01
PTCH1-217ENST00000548420 ANKMY1Q9P2S6 941 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms