RNA–Protein interactions for RNA: ENST00000548357.2

SNX29P1-201, Transcript of sorting nexin 29 pseudogene 1, humanhuman

BASIC

Gene SNX29P1, Length 1,007 nt, Biotype unprocessed pseudogene, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29P1-201ENST00000548357 STK38Q15208 465 aa16.3■□□□□ 0.2
SNX29P1-201ENST00000548357 CFAP221Q4G0U5 840 aa16.3■□□□□ 0.2
SNX29P1-201ENST00000548357 PRR23CQ6ZRP0 262 aa16.3■□□□□ 0.2
SNX29P1-201ENST00000548357 SPATA2LQ8IUW3 424 aaPredicted RBP16.3■□□□□ 0.2
SNX29P1-201ENST00000548357 CCDC65Q8IXS2 484 aa16.3■□□□□ 0.2
SNX29P1-201ENST00000548357 GPR161Q8N6U8 529 aaKnown RBP16.3■□□□□ 0.2
SNX29P1-201ENST00000548357 ELMO3Q96BJ8 720 aa16.3■□□□□ 0.2
SNX29P1-201ENST00000548357 INTS4Q96HW7 963 aaKnown RBP16.3■□□□□ 0.2
SNX29P1-201ENST00000548357 HPDLQ96IR7 371 aa16.3■□□□□ 0.2
SNX29P1-201ENST00000548357 HHIPQ96QV1 700 aa16.3■□□□□ 0.2
SNX29P1-201ENST00000548357 DPEP3Q9H4B8 488 aa16.3■□□□□ 0.2
SNX29P1-201ENST00000548357 SMOC1Q9H4F8 434 aa16.3■□□□□ 0.2
SNX29P1-201ENST00000548357 RXFP3Q9NSD7 469 aa16.3■□□□□ 0.2
SNX29P1-201ENST00000548357 PI4KAP42356 2102 aa16.3■□□□□ 0.2
SNX29P1-201ENST00000548357 ADAMTS9Q9P2N4 1935 aa16.29■□□□□ 0.2
SNX29P1-201ENST00000548357 FRYQ5TBA9 3013 aa16.29■□□□□ 0.2
SNX29P1-201ENST00000548357 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.29■□□□□ 0.2
SNX29P1-201ENST00000548357 SCAMP3O14828 347 aaKnown RBP16.29■□□□□ 0.2
SNX29P1-201ENST00000548357 SPTLC2O15270 562 aa16.29■□□□□ 0.2
SNX29P1-201ENST00000548357 CST3P01034 146 aaPredicted RBP16.29■□□□□ 0.2
SNX29P1-201ENST00000548357 PDGFRBP09619 1106 aa16.29■□□□□ 0.2
SNX29P1-201ENST00000548357 BDNFP23560 247 aa16.29■□□□□ 0.2
SNX29P1-201ENST00000548357 RPL10AP62906 217 aaKnown RBP16.29■□□□□ 0.2
SNX29P1-201ENST00000548357 ZNF268Q14587 947 aaPredicted RBP16.29■□□□□ 0.2
SNX29P1-201ENST00000548357 GAB4Q2WGN9 574 aa16.29■□□□□ 0.2
SNX29P1-201ENST00000548357 EML3Q32P44 896 aa16.29■□□□□ 0.2
SNX29P1-201ENST00000548357 FOXD4L6Q3SYB3 417 aaPredicted RBP16.29■□□□□ 0.2
SNX29P1-201ENST00000548357 FOXD4L3Q6VB84 417 aaPredicted RBP16.29■□□□□ 0.2
SNX29P1-201ENST00000548357 KBTBD6Q86V97 674 aa16.29■□□□□ 0.2
SNX29P1-201ENST00000548357 NELFCDQ8IXH7 590 aa16.29■□□□□ 0.2
SNX29P1-201ENST00000548357 RDH13Q8NBN7 331 aa16.29■□□□□ 0.2
SNX29P1-201ENST00000548357 PLEKHO2Q8TD55 490 aa16.29■□□□□ 0.2
SNX29P1-201ENST00000548357 ZNF516Q92618 1163 aa16.29■□□□□ 0.2
SNX29P1-201ENST00000548357 ANKRD36BP1Q96IX9 119 aa16.29■□□□□ 0.2
SNX29P1-201ENST00000548357 TNMDQ9H2S6 317 aa16.29■□□□□ 0.2
SNX29P1-201ENST00000548357 LINC00597Q9H2U6 94 aa16.29■□□□□ 0.2
SNX29P1-201ENST00000548357 TMEM206Q9H813 350 aa16.29■□□□□ 0.2
SNX29P1-201ENST00000548357 KIF9Q9HAQ2 790 aa16.29■□□□□ 0.2
SNX29P1-201ENST00000548357 PRR5-ARHGAP8B1AHC4 643 aa16.28■□□□□ 0.2
SNX29P1-201ENST00000548357 K7ELQ4 463 aaPredicted RBP16.28■□□□□ 0.2
SNX29P1-201ENST00000548357 AXIN1O15169 862 aa16.28■□□□□ 0.2
SNX29P1-201ENST00000548357 WARSP23381 471 aaKnown RBP16.28■□□□□ 0.2
SNX29P1-201ENST00000548357 HOXA6P31267 233 aa16.28■□□□□ 0.2
SNX29P1-201ENST00000548357 LHX1P48742 406 aa16.28■□□□□ 0.2
SNX29P1-201ENST00000548357 ASIC1P78348 528 aa16.28■□□□□ 0.2
SNX29P1-201ENST00000548357 ARHGAP8P85298 464 aa16.28■□□□□ 0.2
SNX29P1-201ENST00000548357 FAM160A1Q05DH4 1040 aa16.28■□□□□ 0.2
SNX29P1-201ENST00000548357 EHHADHQ08426 723 aa16.28■□□□□ 0.2
SNX29P1-201ENST00000548357 SF3A2Q15428 464 aaKnown RBP16.28■□□□□ 0.2
SNX29P1-201ENST00000548357 CEP68Q76N32 757 aa16.28■□□□□ 0.2
SNX29P1-201ENST00000548357 SFTPA1Q8IWL2 248 aa16.28■□□□□ 0.2
SNX29P1-201ENST00000548357 SYNPOQ8N3V7 929 aa16.28■□□□□ 0.2
SNX29P1-201ENST00000548357 ZNF507Q8TCN5 953 aa16.28■□□□□ 0.2
SNX29P1-201ENST00000548357 SH3RF2Q8TEC5 729 aa16.28■□□□□ 0.2
SNX29P1-201ENST00000548357 CNTNAP3BQ96NU0 1288 aa16.28■□□□□ 0.2
SNX29P1-201ENST00000548357 RTKNQ9BST9 563 aa16.28■□□□□ 0.2
SNX29P1-201ENST00000548357 CNTNAP3Q9BZ76 1288 aa16.28■□□□□ 0.2
SNX29P1-201ENST00000548357 BLZF1Q9H2G9 400 aa16.28■□□□□ 0.2
SNX29P1-201ENST00000548357 ECT2Q9H8V3 914 aa16.28■□□□□ 0.2
SNX29P1-201ENST00000548357 AGPAT3Q9NRZ7 376 aa16.28■□□□□ 0.2
SNX29P1-201ENST00000548357 DUS2Q9NX74 493 aaKnown RBP16.28■□□□□ 0.2
SNX29P1-201ENST00000548357 USP24Q9UPU5 2620 aa16.27■□□□□ 0.2
SNX29P1-201ENST00000548357 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.27■□□□□ 0.2
SNX29P1-201ENST00000548357 TRAV19A0A0A6YYK7 116 aa16.27■□□□□ 0.2
SNX29P1-201ENST00000548357 ZNF233A6NK53 670 aa16.27■□□□□ 0.2
SNX29P1-201ENST00000548357 CKMP06732 381 aa16.27■□□□□ 0.2
SNX29P1-201ENST00000548357 PCSK1P29120 753 aa16.27■□□□□ 0.2
SNX29P1-201ENST00000548357 MAGEA11P43364 429 aa16.27■□□□□ 0.2
SNX29P1-201ENST00000548357 CYP2J2P51589 502 aa16.27■□□□□ 0.2
SNX29P1-201ENST00000548357 CYP27A1Q02318 531 aa16.27■□□□□ 0.2
SNX29P1-201ENST00000548357 MESP2Q0VG99 397 aa16.27■□□□□ 0.2
SNX29P1-201ENST00000548357 GRSF1Q12849 480 aaKnown RBP eCLIP16.27■□□□□ 0.2
SNX29P1-201ENST00000548357 CSRP2Q16527 193 aa16.27■□□□□ 0.2
SNX29P1-201ENST00000548357 MDH1BQ5I0G3 518 aa16.27■□□□□ 0.2
SNX29P1-201ENST00000548357 FAM26FQ5R3K3 315 aa16.27■□□□□ 0.2
SNX29P1-201ENST00000548357 TRAPPC11Q7Z392 1133 aa16.27■□□□□ 0.2
SNX29P1-201ENST00000548357 WDR49Q8IV35 697 aa16.27■□□□□ 0.2
SNX29P1-201ENST00000548357 GRAMD1CQ8IYS0 662 aa16.27■□□□□ 0.2
SNX29P1-201ENST00000548357 RPLP0P6Q8NHW5 317 aa16.27■□□□□ 0.2
SNX29P1-201ENST00000548357 SPATA18Q8TC71 538 aa16.27■□□□□ 0.2
SNX29P1-201ENST00000548357 OSCP1Q8WVF1 389 aa16.27■□□□□ 0.2
SNX29P1-201ENST00000548357 SCFD1Q8WVM8 642 aa16.27■□□□□ 0.2
SNX29P1-201ENST00000548357 GAB3Q8WWW8 586 aa16.27■□□□□ 0.2
SNX29P1-201ENST00000548357 PCED1BQ96HM7 432 aa16.27■□□□□ 0.2
SNX29P1-201ENST00000548357 FUBP3Q96I24 572 aaKnown RBP eCLIP16.27■□□□□ 0.2
SNX29P1-201ENST00000548357 P2RY13Q9BPV8 354 aa16.27■□□□□ 0.2
SNX29P1-201ENST00000548357 BACH2Q9BYV9 841 aa16.27■□□□□ 0.2
SNX29P1-201ENST00000548357 ARRDC1-AS1Q9H2J1 176 aa16.27■□□□□ 0.2
SNX29P1-201ENST00000548357 ZSCAN16Q9H4T2 348 aaPredicted RBP16.27■□□□□ 0.2
SNX29P1-201ENST00000548357 UXTQ9UBK9 157 aaPredicted RBP16.27■□□□□ 0.2
SNX29P1-201ENST00000548357 ZMYM5Q9UJ78 669 aa16.27■□□□□ 0.2
SNX29P1-201ENST00000548357 CDH9Q9ULB4 789 aa16.27■□□□□ 0.2
SNX29P1-201ENST00000548357 GON4LQ3T8J9 2241 aa16.27■□□□□ 0.19
SNX29P1-201ENST00000548357 CLDN5O00501 218 aa16.26■□□□□ 0.19
SNX29P1-201ENST00000548357 SLC30A4O14863 429 aa16.26■□□□□ 0.19
SNX29P1-201ENST00000548357 DCLK1O15075 740 aa16.26■□□□□ 0.19
SNX29P1-201ENST00000548357 TNNC2P02585 160 aa16.26■□□□□ 0.19
SNX29P1-201ENST00000548357 USP17L7P0C7H9 530 aa16.26■□□□□ 0.19
SNX29P1-201ENST00000548357 DLATP10515 647 aaKnown RBP16.26■□□□□ 0.19
SNX29P1-201ENST00000548357 CNR2P34972 360 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms