RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 APBB3O95704 486 aa12.82□□□□□ -0.36
TRAFD1-205ENST00000548277 ABL1P00519 1130 aa12.82□□□□□ -0.36
TRAFD1-205ENST00000548277 PDGFRBP09619 1106 aa12.82□□□□□ -0.36
TRAFD1-205ENST00000548277 SPINK2P20155 84 aa12.82□□□□□ -0.36
TRAFD1-205ENST00000548277 LMO2P25791 158 aa12.82□□□□□ -0.36
TRAFD1-205ENST00000548277 ABCD1P33897 745 aa12.82□□□□□ -0.36
TRAFD1-205ENST00000548277 CASP5P51878 434 aa12.82□□□□□ -0.36
TRAFD1-205ENST00000548277 PSMC1P62191 440 aaKnown RBP12.82□□□□□ -0.36
TRAFD1-205ENST00000548277 NR1H3Q13133 447 aa12.82□□□□□ -0.36
TRAFD1-205ENST00000548277 ZNF77Q15935 545 aa12.82□□□□□ -0.36
TRAFD1-205ENST00000548277 EML3Q32P44 896 aa12.82□□□□□ -0.36
TRAFD1-205ENST00000548277 RRAGBQ5VZM2 374 aa12.82□□□□□ -0.36
TRAFD1-205ENST00000548277 SYT13Q7L8C5 426 aa12.82□□□□□ -0.36
TRAFD1-205ENST00000548277 NT5DC4Q86YG4 428 aa12.82□□□□□ -0.36
TRAFD1-205ENST00000548277 ADGRF2Q8IZF7 708 aa12.82□□□□□ -0.36
TRAFD1-205ENST00000548277 EXOC4Q96A65 974 aa12.82□□□□□ -0.36
TRAFD1-205ENST00000548277 CBWD1Q9BRT8 395 aa12.82□□□□□ -0.36
TRAFD1-205ENST00000548277 FGFBP2Q9BYJ0 223 aa12.82□□□□□ -0.36
TRAFD1-205ENST00000548277 MTMR12Q9C0I1 747 aa12.82□□□□□ -0.36
TRAFD1-205ENST00000548277 ST6GALNAC4Q9H4F1 302 aa12.82□□□□□ -0.36
TRAFD1-205ENST00000548277 MAGEC2Q9UBF1 373 aaPredicted RBP12.82□□□□□ -0.36
TRAFD1-205ENST00000548277 CCDC39Q9UFE4 941 aa12.82□□□□□ -0.36
TRAFD1-205ENST00000548277 EXOC7Q9UPT5 735 aa12.82□□□□□ -0.36
TRAFD1-205ENST00000548277 R3HCC1Q9Y3T6 440 aaKnown RBP12.82□□□□□ -0.36
TRAFD1-205ENST00000548277 PCDHGA5Q9Y5G8 931 aa12.82□□□□□ -0.36
TRAFD1-205ENST00000548277 KMT2BQ9UMN6 2715 aaPredicted RBP12.82□□□□□ -0.36
TRAFD1-205ENST00000548277 VPS37CA5D8V6 355 aaPredicted RBP12.81□□□□□ -0.36
TRAFD1-205ENST00000548277 PATE3B3GLJ2 98 aa12.81□□□□□ -0.36
TRAFD1-205ENST00000548277 PRPF6O94906 941 aaKnown RBP12.81□□□□□ -0.36
TRAFD1-205ENST00000548277 LDHAP00338 332 aaKnown RBP12.81□□□□□ -0.36
TRAFD1-205ENST00000548277 TMEM191BP0C7N4 346 aa12.81□□□□□ -0.36
TRAFD1-205ENST00000548277 BDNFP23560 247 aa12.81□□□□□ -0.36
TRAFD1-205ENST00000548277 GRIK1P39086 918 aa12.81□□□□□ -0.36
TRAFD1-205ENST00000548277 NOVA1P51513 510 aaKnown RBP12.81□□□□□ -0.36
TRAFD1-205ENST00000548277 RBP5P82980 135 aa12.81□□□□□ -0.36
TRAFD1-205ENST00000548277 CYP27A1Q02318 531 aa12.81□□□□□ -0.36
TRAFD1-205ENST00000548277 IFRD2Q12894 506 aaPredicted RBP12.81□□□□□ -0.36
TRAFD1-205ENST00000548277 FOXC1Q12948 553 aa12.81□□□□□ -0.36
TRAFD1-205ENST00000548277 ZNF268Q14587 947 aaPredicted RBP12.81□□□□□ -0.36
TRAFD1-205ENST00000548277 KCNB1Q14721 858 aa12.81□□□□□ -0.36
TRAFD1-205ENST00000548277 SOWAHAQ2M3V2 549 aa12.81□□□□□ -0.36
TRAFD1-205ENST00000548277 UAP1L1Q3KQV9 507 aa12.81□□□□□ -0.36
TRAFD1-205ENST00000548277 FBXO43Q4G163 708 aa12.81□□□□□ -0.36
TRAFD1-205ENST00000548277 L1TD1Q5T7N2 865 aaKnown RBP12.81□□□□□ -0.36
TRAFD1-205ENST00000548277 ANO7Q6IWH7 933 aa12.81□□□□□ -0.36
TRAFD1-205ENST00000548277 FAM173BQ6P4H8 233 aa12.81□□□□□ -0.36
TRAFD1-205ENST00000548277 SV2BQ7L1I2 683 aa12.81□□□□□ -0.36
TRAFD1-205ENST00000548277 BRSK2Q8IWQ3 736 aa12.81□□□□□ -0.36
TRAFD1-205ENST00000548277 FSIP1Q8NA03 581 aa12.81□□□□□ -0.36
TRAFD1-205ENST00000548277 TSTD1Q8NFU3 115 aa12.81□□□□□ -0.36
TRAFD1-205ENST00000548277 ATP2A3Q93084 1043 aa12.81□□□□□ -0.36
TRAFD1-205ENST00000548277 PKMYT1Q99640 499 aa12.81□□□□□ -0.36
TRAFD1-205ENST00000548277 ZDHHC4Q9NPG8 344 aa12.81□□□□□ -0.36
TRAFD1-205ENST00000548277 GCNT4Q9P109 453 aa12.81□□□□□ -0.36
TRAFD1-205ENST00000548277 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.81□□□□□ -0.36
TRAFD1-205ENST00000548277 EPG5Q9HCE0 2579 aa12.81□□□□□ -0.36
TRAFD1-205ENST00000548277 PCNX2A6NKB5 2137 aa12.8□□□□□ -0.36
TRAFD1-205ENST00000548277 BCLAF3A2AJT9 711 aaKnown RBP12.8□□□□□ -0.36
TRAFD1-205ENST00000548277 C1QTNF9BB2RNN3 333 aa12.8□□□□□ -0.36
TRAFD1-205ENST00000548277 K7EQS6 105 aa12.8□□□□□ -0.36
TRAFD1-205ENST00000548277 PPP1R37O75864 691 aa12.8□□□□□ -0.36
TRAFD1-205ENST00000548277 AKAP3O75969 853 aa12.8□□□□□ -0.36
TRAFD1-205ENST00000548277 BMP15O95972 392 aa12.8□□□□□ -0.36
TRAFD1-205ENST00000548277 TOP3BO95985 862 aaKnown RBP12.8□□□□□ -0.36
TRAFD1-205ENST00000548277 C1QTNF9P0C862 333 aa12.8□□□□□ -0.36
TRAFD1-205ENST00000548277 BCKDHBP21953 392 aa12.8□□□□□ -0.36
TRAFD1-205ENST00000548277 SLC6A11P48066 632 aa12.8□□□□□ -0.36
TRAFD1-205ENST00000548277 LHX1P48742 406 aa12.8□□□□□ -0.36
TRAFD1-205ENST00000548277 DHPSP49366 369 aaPredicted RBP12.8□□□□□ -0.36
TRAFD1-205ENST00000548277 ZXDBP98169 803 aa12.8□□□□□ -0.36
TRAFD1-205ENST00000548277 USP4Q13107 963 aa12.8□□□□□ -0.36
TRAFD1-205ENST00000548277 USP39Q53GS9 565 aaKnown RBP12.8□□□□□ -0.36
TRAFD1-205ENST00000548277 SFTPA1Q8IWL2 248 aa12.8□□□□□ -0.36
TRAFD1-205ENST00000548277 TMEM86AQ8N2M4 240 aa12.8□□□□□ -0.36
TRAFD1-205ENST00000548277 LEO1Q8WVC0 666 aaPredicted RBP12.8□□□□□ -0.36
TRAFD1-205ENST00000548277 RLN3Q8WXF3 142 aa12.8□□□□□ -0.36
TRAFD1-205ENST00000548277 ACDQ96AP0 544 aa12.8□□□□□ -0.36
TRAFD1-205ENST00000548277 HVCN1Q96D96 273 aa12.8□□□□□ -0.36
TRAFD1-205ENST00000548277 DNAJC19Q96DA6 116 aa12.8□□□□□ -0.36
TRAFD1-205ENST00000548277 TRMT2BQ96GJ1 504 aaKnown RBP12.8□□□□□ -0.36
TRAFD1-205ENST00000548277 MYRFLQ96LU7 910 aa12.8□□□□□ -0.36
TRAFD1-205ENST00000548277 MMS19Q96T76 1030 aa12.8□□□□□ -0.36
TRAFD1-205ENST00000548277 SYT15Q9BQS2 421 aa12.8□□□□□ -0.36
TRAFD1-205ENST00000548277 STRA6Q9BX79 667 aa12.8□□□□□ -0.36
TRAFD1-205ENST00000548277 TMEM206Q9H813 350 aa12.8□□□□□ -0.36
TRAFD1-205ENST00000548277 PANK4Q9NVE7 773 aa12.8□□□□□ -0.36
TRAFD1-205ENST00000548277 SMPD4Q9NXE4 827 aa12.8□□□□□ -0.36
TRAFD1-205ENST00000548277 SIX4Q9UIU6 781 aa12.8□□□□□ -0.36
TRAFD1-205ENST00000548277 ITGA11Q9UKX5 1188 aa12.8□□□□□ -0.36
TRAFD1-205ENST00000548277 TNRC6BQ9UPQ9 1833 aaKnown RBP12.79□□□□□ -0.36
TRAFD1-205ENST00000548277 SOBPA7XYQ1 873 aa12.79□□□□□ -0.36
TRAFD1-205ENST00000548277 LEFTY2O00292 366 aa12.79□□□□□ -0.36
TRAFD1-205ENST00000548277 GAP43P17677 238 aa12.79□□□□□ -0.36
TRAFD1-205ENST00000548277 PCSK1P29120 753 aa12.79□□□□□ -0.36
TRAFD1-205ENST00000548277 TIE1P35590 1138 aa12.79□□□□□ -0.36
TRAFD1-205ENST00000548277 OPRD1P41143 372 aa12.79□□□□□ -0.36
TRAFD1-205ENST00000548277 USP46P62068 366 aa12.79□□□□□ -0.36
TRAFD1-205ENST00000548277 IRX4P78413 519 aa12.79□□□□□ -0.36
TRAFD1-205ENST00000548277 POU5F1Q01860 360 aaKnown RBP12.79□□□□□ -0.36
TRAFD1-205ENST00000548277 SH3PXD2AQ5TCZ1 1133 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms