RNA–Protein interactions for RNA: ENST00000547533.1

AC055716.3-201, humanhuman

TSL 3 BASIC

Gene AC055716.3, Length 761 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.3-201ENST00000547533 KIAA1958Q8N8K9 716 aa9.78□□□□□ -0.84
AC055716.3-201ENST00000547533 CHFRQ96EP1 664 aa9.78□□□□□ -0.84
AC055716.3-201ENST00000547533 ANKRD36BP1Q96IX9 119 aa9.78□□□□□ -0.84
AC055716.3-201ENST00000547533 MYRFLQ96LU7 910 aa9.78□□□□□ -0.84
AC055716.3-201ENST00000547533 FAM213AQ9BRX8 229 aa9.78□□□□□ -0.84
AC055716.3-201ENST00000547533 NUSAP1Q9BXS6 441 aaKnown RBP9.78□□□□□ -0.84
AC055716.3-201ENST00000547533 UPF2Q9HAU5 1272 aaKnown RBP9.78□□□□□ -0.84
AC055716.3-201ENST00000547533 POLMQ9NP87 494 aaPredicted RBP9.78□□□□□ -0.84
AC055716.3-201ENST00000547533 RBAKQ9NYW8 714 aaPredicted RBP9.78□□□□□ -0.84
AC055716.3-201ENST00000547533 TRPM5Q9NZQ8 1165 aa9.78□□□□□ -0.84
AC055716.3-201ENST00000547533 BCCIPQ9P287 314 aaKnown RBP eCLIP9.78□□□□□ -0.84
AC055716.3-201ENST00000547533 MAGEC2Q9UBF1 373 aaPredicted RBP9.78□□□□□ -0.84
AC055716.3-201ENST00000547533 STK17AQ9UEE5 414 aa9.78□□□□□ -0.84
AC055716.3-201ENST00000547533 SMC3Q9UQE7 1217 aa9.78□□□□□ -0.84
AC055716.3-201ENST00000547533 SNX9Q9Y5X1 595 aa9.78□□□□□ -0.84
AC055716.3-201ENST00000547533 OTOL1A6NHN0 477 aaPredicted RBP9.77□□□□□ -0.85
AC055716.3-201ENST00000547533 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.77□□□□□ -0.85
AC055716.3-201ENST00000547533 ANKRD63C9JTQ0 380 aa9.77□□□□□ -0.85
AC055716.3-201ENST00000547533 TRIM66O15016 1216 aa9.77□□□□□ -0.85
AC055716.3-201ENST00000547533 KIAA0391O15091 583 aaKnown RBP9.77□□□□□ -0.85
AC055716.3-201ENST00000547533 GCNT3O95395 438 aa9.77□□□□□ -0.85
AC055716.3-201ENST00000547533 CSRP1P21291 193 aaKnown RBP9.77□□□□□ -0.85
AC055716.3-201ENST00000547533 GARTP22102 1010 aa9.77□□□□□ -0.85
AC055716.3-201ENST00000547533 CYP2F1P24903 491 aa9.77□□□□□ -0.85
AC055716.3-201ENST00000547533 GRIK1P39086 918 aa9.77□□□□□ -0.85
AC055716.3-201ENST00000547533 MAGEA11P43364 429 aa9.77□□□□□ -0.85
AC055716.3-201ENST00000547533 DHPSP49366 369 aaPredicted RBP9.77□□□□□ -0.85
AC055716.3-201ENST00000547533 ATXN3P54252 364 aaPredicted RBP9.77□□□□□ -0.85
AC055716.3-201ENST00000547533 SEC13P55735 322 aa9.77□□□□□ -0.85
AC055716.3-201ENST00000547533 MRPS21P82921 87 aaKnown RBP9.77□□□□□ -0.85
AC055716.3-201ENST00000547533 FOXC1Q12948 553 aa9.77□□□□□ -0.85
AC055716.3-201ENST00000547533 USP4Q13107 963 aa9.77□□□□□ -0.85
AC055716.3-201ENST00000547533 EML3Q32P44 896 aa9.77□□□□□ -0.85
AC055716.3-201ENST00000547533 HSF5Q4G112 596 aaPredicted RBP9.77□□□□□ -0.85
AC055716.3-201ENST00000547533 C2orf27AQ580R0 203 aa9.77□□□□□ -0.85
AC055716.3-201ENST00000547533 L1TD1Q5T7N2 865 aaKnown RBP9.77□□□□□ -0.85
AC055716.3-201ENST00000547533 SH3PXD2AQ5TCZ1 1133 aa9.77□□□□□ -0.85
AC055716.3-201ENST00000547533 PMS2CLQ68D20 193 aa9.77□□□□□ -0.85
AC055716.3-201ENST00000547533 UNQ6494/PRO21346Q6UXR6 183 aa9.77□□□□□ -0.85
AC055716.3-201ENST00000547533 SV2BQ7L1I2 683 aa9.77□□□□□ -0.85
AC055716.3-201ENST00000547533 DPH6Q7L8W6 267 aa9.77□□□□□ -0.85
AC055716.3-201ENST00000547533 ZNF720Q7Z2F6 126 aa9.77□□□□□ -0.85
AC055716.3-201ENST00000547533 TRMT11Q7Z4G4 463 aaKnown RBP9.77□□□□□ -0.85
AC055716.3-201ENST00000547533 RABEPKQ7Z6M1 372 aa9.77□□□□□ -0.85
AC055716.3-201ENST00000547533 TMEM150AQ86TG1 271 aa9.77□□□□□ -0.85
AC055716.3-201ENST00000547533 SFR1Q86XK3 245 aa9.77□□□□□ -0.85
AC055716.3-201ENST00000547533 DDX42Q86XP3 938 aaKnown RBP eCLIP9.77□□□□□ -0.85
AC055716.3-201ENST00000547533 EFCAB13Q8IY85 973 aa9.77□□□□□ -0.85
AC055716.3-201ENST00000547533 ADGRF2Q8IZF7 708 aa9.77□□□□□ -0.85
AC055716.3-201ENST00000547533 SH3RF2Q8TEC5 729 aa9.77□□□□□ -0.85
AC055716.3-201ENST00000547533 WHAMMQ8TF30 809 aa9.77□□□□□ -0.85
AC055716.3-201ENST00000547533 CNOT6LQ96LI5 555 aaKnown RBP9.77□□□□□ -0.85
AC055716.3-201ENST00000547533 SMOC1Q9H4F8 434 aa9.77□□□□□ -0.85
AC055716.3-201ENST00000547533 RXFP3Q9NSD7 469 aa9.77□□□□□ -0.85
AC055716.3-201ENST00000547533 GDAP2Q9NXN4 497 aa9.77□□□□□ -0.85
AC055716.3-201ENST00000547533 GTF3C4Q9UKN8 822 aa9.77□□□□□ -0.85
AC055716.3-201ENST00000547533 ARHGAP26Q9UNA1 814 aa9.77□□□□□ -0.85
AC055716.3-201ENST00000547533 WNT6Q9Y6F9 365 aa9.77□□□□□ -0.85
AC055716.3-201ENST00000547533 CEP192Q8TEP8 1941 aa9.77□□□□□ -0.85
AC055716.3-201ENST00000547533 ABCA7Q8IZY2 2146 aa9.76□□□□□ -0.85
AC055716.3-201ENST00000547533 DCLK1O15075 740 aa9.76□□□□□ -0.85
AC055716.3-201ENST00000547533 ADH1CP00326 375 aa9.76□□□□□ -0.85
AC055716.3-201ENST00000547533 APODP05090 189 aa9.76□□□□□ -0.85
AC055716.3-201ENST00000547533 TCF3P15923 654 aa9.76□□□□□ -0.85
AC055716.3-201ENST00000547533 ACAT1P24752 427 aaKnown RBP9.76□□□□□ -0.85
AC055716.3-201ENST00000547533 CYP27A1Q02318 531 aa9.76□□□□□ -0.85
AC055716.3-201ENST00000547533 UAP1L1Q3KQV9 507 aa9.76□□□□□ -0.85
AC055716.3-201ENST00000547533 SPDYCQ5MJ68 293 aa9.76□□□□□ -0.85
AC055716.3-201ENST00000547533 EOGTQ5NDL2 527 aa9.76□□□□□ -0.85
AC055716.3-201ENST00000547533 SDHAF4Q5VUM1 108 aa9.76□□□□□ -0.85
AC055716.3-201ENST00000547533 RRAGBQ5VZM2 374 aa9.76□□□□□ -0.85
AC055716.3-201ENST00000547533 LARP1BQ659C4 914 aaKnown RBP9.76□□□□□ -0.85
AC055716.3-201ENST00000547533 TCEAL6Q6IPX3 200 aa9.76□□□□□ -0.85
AC055716.3-201ENST00000547533 ANO7Q6IWH7 933 aa9.76□□□□□ -0.85
AC055716.3-201ENST00000547533 CCDC73Q6ZRK6 1079 aa9.76□□□□□ -0.85
AC055716.3-201ENST00000547533 DENND5BQ6ZUT9 1274 aa9.76□□□□□ -0.85
AC055716.3-201ENST00000547533 DYMQ7RTS9 669 aa9.76□□□□□ -0.85
AC055716.3-201ENST00000547533 BRSK2Q8IWQ3 736 aa9.76□□□□□ -0.85
AC055716.3-201ENST00000547533 PGBD3Q8N328 593 aa9.76□□□□□ -0.85
AC055716.3-201ENST00000547533 ARL14EPQ8N8R7 260 aaPredicted RBP9.76□□□□□ -0.85
AC055716.3-201ENST00000547533 STKLD1Q8NE28 680 aa9.76□□□□□ -0.85
AC055716.3-201ENST00000547533 PIGKQ92643 395 aa9.76□□□□□ -0.85
AC055716.3-201ENST00000547533 TCEAL3Q969E4 200 aa9.76□□□□□ -0.85
AC055716.3-201ENST00000547533 SPATA17Q96L03 361 aa9.76□□□□□ -0.85
AC055716.3-201ENST00000547533 SLITRK1Q96PX8 696 aa9.76□□□□□ -0.85
AC055716.3-201ENST00000547533 CYP2S1Q96SQ9 504 aa9.76□□□□□ -0.85
AC055716.3-201ENST00000547533 SYT15Q9BQS2 421 aa9.76□□□□□ -0.85
AC055716.3-201ENST00000547533 TPSD1Q9BZJ3 242 aa9.76□□□□□ -0.85
AC055716.3-201ENST00000547533 LRRC27Q9C0I9 530 aa9.76□□□□□ -0.85
AC055716.3-201ENST00000547533 SNX25Q9H3E2 840 aa9.76□□□□□ -0.85
AC055716.3-201ENST00000547533 BLOC1S4Q9NUP1 217 aa9.76□□□□□ -0.85
AC055716.3-201ENST00000547533 TMLHEQ9NVH6 421 aa9.76□□□□□ -0.85
AC055716.3-201ENST00000547533 CDH9Q9ULB4 789 aa9.76□□□□□ -0.85
AC055716.3-201ENST00000547533 MMP17Q9ULZ9 603 aa9.76□□□□□ -0.85
AC055716.3-201ENST00000547533 L1RE1Q9UN81 338 aa9.76□□□□□ -0.85
AC055716.3-201ENST00000547533 PI4KAP42356 2102 aa9.76□□□□□ -0.85
AC055716.3-201ENST00000547533 CACNA1GO43497 2377 aa9.75□□□□□ -0.85
AC055716.3-201ENST00000547533 LNP1A1A4G5 178 aa9.75□□□□□ -0.85
AC055716.3-201ENST00000547533 PRPF6O94906 941 aaKnown RBP9.75□□□□□ -0.85
AC055716.3-201ENST00000547533 SEC24BO95487 1268 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms