RNA–Protein interactions for RNA: ENST00000547417.1

CPNE8-205, Transcript of copine 8, humanhuman

TSL 2

Gene CPNE8, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-205ENST00000547417 EPN1Q9Y6I3 576 aaPredicted RBP2.68□□□□□ -1.98
CPNE8-205ENST00000547417 SPATA31A6Q5VVP1 1343 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 ITIH6Q6UXX5 1313 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 MBD3L4A6NDZ8 208 aaPredicted RBP2.67□□□□□ -1.98
CPNE8-205ENST00000547417 MBD3L3A6NE82 208 aaPredicted RBP2.67□□□□□ -1.98
CPNE8-205ENST00000547417 PRR5-ARHGAP8B1AHC4 643 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 DIRC3C9JPN6 131 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 J3KRW8 73 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 MYO1CO00159 1063 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 SYT5O00445 386 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 NPC1O15118 1278 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 NCAM2O15394 837 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 SLC43A1O75387 559 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 MATN4O95460 622 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 MT-ND5P03915 603 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 GNAI2P04899 355 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 CD1AP06126 327 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 MYL4P12829 197 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 XRCC6P12956 609 aaKnown RBP eCLIP2.67□□□□□ -1.98
CPNE8-205ENST00000547417 KLRC1P26715 233 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 PCSK1P29120 753 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 CXCR5P32302 372 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 PTPN7P35236 360 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 ITGA8P53708 1063 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 SEC24CP53992 1094 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 SOX8P57073 446 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 RPS16P62249 146 aaKnown RBP2.67□□□□□ -1.98
CPNE8-205ENST00000547417 GUCY1B3Q02153 619 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 GALNT1Q10472 559 aaPredicted RBP2.67□□□□□ -1.98
CPNE8-205ENST00000547417 SPARCL1Q14515 664 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 TAF12Q16514 161 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 SLC4A8Q2Y0W8 1093 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 BEAN1Q3B7T3 259 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 AMOTQ4VCS5 1084 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 CCDC93Q567U6 631 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 C3orf38Q5JPI3 329 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 FBXO47Q5MNV8 452 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 ARL6IP4Q66PJ3 421 aaKnown RBP2.67□□□□□ -1.98
CPNE8-205ENST00000547417 LMBRD2Q68DH5 695 aaPredicted RBP2.67□□□□□ -1.98
CPNE8-205ENST00000547417 TANGO2Q6ICL3 276 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 SEM1Q6ZVN7 128 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 BHLHA9Q7RTU4 235 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 KRT28Q7Z3Y7 464 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 MICU3Q86XE3 530 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 PLXDC1Q8IUK5 500 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 YAF2Q8IY57 180 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 TRMT2AQ8IZ69 625 aaKnown RBP2.67□□□□□ -1.98
CPNE8-205ENST00000547417 VGLL2Q8N8G2 317 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 CCDC150Q8NCX0 1101 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 SNRNP27Q8WVK2 155 aaKnown RBP2.67□□□□□ -1.98
CPNE8-205ENST00000547417 MUL1Q969V5 352 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 UBXN10Q96LJ8 280 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 P2RX7Q99572 595 aaKnown RBP2.67□□□□□ -1.98
CPNE8-205ENST00000547417 GDF15Q99988 308 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 HEPHQ9BQS7 1158 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 MAGEB5Q9BZ81 275 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 PRDM13Q9H4Q3 707 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 BRD9Q9H8M2 597 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 SMURF2Q9HAU4 748 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 SPON1Q9HCB6 807 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 RASSF1Q9NS23 344 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.67□□□□□ -1.98
CPNE8-205ENST00000547417 DACT1Q9NYF0 836 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 FBXO2Q9UK22 296 aaPredicted RBP2.67□□□□□ -1.98
CPNE8-205ENST00000547417 SLC13A4Q9UKG4 626 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 SLC39A10Q9ULF5 831 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 MAN2B2Q9Y2E5 1009 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 CHST2Q9Y4C5 530 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 PLEKHM1Q9Y4G2 1056 aa2.67□□□□□ -1.98
CPNE8-205ENST00000547417 ATRNL1Q5VV63 1379 aa2.66□□□□□ -1.98
CPNE8-205ENST00000547417 A0A087WWL8 130 aa2.66□□□□□ -1.98
CPNE8-205ENST00000547417 PIPSLA2A3N6 862 aa2.66□□□□□ -1.98
CPNE8-205ENST00000547417 PYCARD-AS1I3L0S3 204 aa2.66□□□□□ -1.98
CPNE8-205ENST00000547417 LEFTY2O00292 366 aa2.66□□□□□ -1.98
CPNE8-205ENST00000547417 PJA2O43164 708 aa2.66□□□□□ -1.98
CPNE8-205ENST00000547417 KCNQ3O43525 872 aa2.66□□□□□ -1.98
CPNE8-205ENST00000547417 CHEK2O96017 543 aa2.66□□□□□ -1.98
CPNE8-205ENST00000547417 AHSGP02765 367 aa2.66□□□□□ -1.98
CPNE8-205ENST00000547417 HLA-DOAP06340 250 aa2.66□□□□□ -1.98
CPNE8-205ENST00000547417 ITGA5P08648 1049 aa2.66□□□□□ -1.98
CPNE8-205ENST00000547417 SNRPA1P09661 255 aaKnown RBP2.66□□□□□ -1.98
CPNE8-205ENST00000547417 FAM163BP0C2L3 166 aa2.66□□□□□ -1.98
CPNE8-205ENST00000547417 RARBP10826 455 aa2.66□□□□□ -1.98
CPNE8-205ENST00000547417 CYP2C9P11712 490 aa2.66□□□□□ -1.98
CPNE8-205ENST00000547417 ALAS1P13196 640 aa2.66□□□□□ -1.98
CPNE8-205ENST00000547417 HDCP19113 662 aa2.66□□□□□ -1.98
CPNE8-205ENST00000547417 COPAP53621 1224 aa2.66□□□□□ -1.98
CPNE8-205ENST00000547417 EIF5P55010 431 aaKnown RBP2.66□□□□□ -1.98
CPNE8-205ENST00000547417 ELLP55199 621 aaPredicted RBP2.66□□□□□ -1.98
CPNE8-205ENST00000547417 GEMIN4P57678 1058 aaKnown RBP2.66□□□□□ -1.98
CPNE8-205ENST00000547417 RNASE9P60153 205 aaKnown RBP2.66□□□□□ -1.98
CPNE8-205ENST00000547417 NOMO3P69849 1222 aa2.66□□□□□ -1.98
CPNE8-205ENST00000547417 BLOC1S1P78537 153 aa2.66□□□□□ -1.98
CPNE8-205ENST00000547417 NHLH2Q02577 135 aa2.66□□□□□ -1.98
CPNE8-205ENST00000547417 FOXD4Q12950 439 aaPredicted RBP2.66□□□□□ -1.98
CPNE8-205ENST00000547417 FOXI1Q12951 378 aa2.66□□□□□ -1.98
CPNE8-205ENST00000547417 CTBP1Q13363 440 aa2.66□□□□□ -1.98
CPNE8-205ENST00000547417 RAB30Q15771 203 aa2.66□□□□□ -1.98
CPNE8-205ENST00000547417 ABHD17BQ5VST6 288 aa2.66□□□□□ -1.98
CPNE8-205ENST00000547417 KLHDC7AQ5VTJ3 777 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms