RNA–Protein interactions for RNA: ENST00000547230.5

CACNB3-204, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3 BASIC

Gene CACNB3, Length 2,395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-204ENST00000547230 GJD4Q96KN9 370 aaPredicted RBP13.29□□□□□ -0.28
CACNB3-204ENST00000547230 FAM111AQ96PZ2 611 aa13.29□□□□□ -0.28
CACNB3-204ENST00000547230 TUBB6Q9BUF5 446 aa13.29□□□□□ -0.28
CACNB3-204ENST00000547230 CHMP2BQ9UQN3 213 aa13.29□□□□□ -0.28
CACNB3-204ENST00000547230 MTO1Q9Y2Z2 717 aaKnown RBP13.29□□□□□ -0.28
CACNB3-204ENST00000547230 E5RJQ4 531 aa13.28□□□□□ -0.28
CACNB3-204ENST00000547230 RTP1P59025 263 aa13.28□□□□□ -0.28
CACNB3-204ENST00000547230 SARNPP82979 210 aaKnown RBP13.28□□□□□ -0.28
CACNB3-204ENST00000547230 SP4Q02446 784 aa13.28□□□□□ -0.28
CACNB3-204ENST00000547230 CIAPIN1Q6FI81 312 aa13.28□□□□□ -0.28
CACNB3-204ENST00000547230 APLFQ8IW19 511 aaPredicted RBP13.28□□□□□ -0.28
CACNB3-204ENST00000547230 PALM2Q8IXS6 379 aa13.28□□□□□ -0.28
CACNB3-204ENST00000547230 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.28□□□□□ -0.28
CACNB3-204ENST00000547230 RDM1Q8NG50 284 aa13.28□□□□□ -0.28
CACNB3-204ENST00000547230 IFT43Q96FT9 208 aa13.28□□□□□ -0.28
CACNB3-204ENST00000547230 CGRRF1Q99675 332 aa13.28□□□□□ -0.28
CACNB3-204ENST00000547230 ARMCX1Q9P291 453 aa13.28□□□□□ -0.28
CACNB3-204ENST00000547230 STYXL1Q9Y6J8 313 aa13.28□□□□□ -0.28
CACNB3-204ENST00000547230 WASF2Q9Y6W5 498 aa13.28□□□□□ -0.28
CACNB3-204ENST00000547230 SIP14410 1827 aa13.28□□□□□ -0.28
CACNB3-204ENST00000547230 FCHO1O14526 889 aa13.28□□□□□ -0.28
CACNB3-204ENST00000547230 CST8O60676 142 aa13.28□□□□□ -0.28
CACNB3-204ENST00000547230 MT-ND3P03897 115 aa13.28□□□□□ -0.28
CACNB3-204ENST00000547230 MYL2P10916 166 aa13.28□□□□□ -0.28
CACNB3-204ENST00000547230 ESRRAP11474 423 aaPredicted RBP13.28□□□□□ -0.28
CACNB3-204ENST00000547230 NRLP54845 237 aa13.28□□□□□ -0.28
CACNB3-204ENST00000547230 PTK7Q13308 1070 aa13.28□□□□□ -0.28
CACNB3-204ENST00000547230 PIGHQ14442 188 aaPredicted RBP13.28□□□□□ -0.28
CACNB3-204ENST00000547230 KRT72Q14CN4 511 aa13.28□□□□□ -0.28
CACNB3-204ENST00000547230 SEZ6Q53EL9 994 aa13.28□□□□□ -0.28
CACNB3-204ENST00000547230 SWSAP1Q6NVH7 229 aa13.28□□□□□ -0.28
CACNB3-204ENST00000547230 ZC3H18Q86VM9 953 aaKnown RBP13.28□□□□□ -0.28
CACNB3-204ENST00000547230 UNC45BQ8IWX7 931 aa13.28□□□□□ -0.28
CACNB3-204ENST00000547230 KBTBD2Q8IY47 623 aa13.28□□□□□ -0.28
CACNB3-204ENST00000547230 SEPT12Q8IYM1 358 aa13.28□□□□□ -0.28
CACNB3-204ENST00000547230 ATP6V0A1Q93050 837 aa13.28□□□□□ -0.28
CACNB3-204ENST00000547230 APOPT1Q96IL0 206 aa13.28□□□□□ -0.28
CACNB3-204ENST00000547230 SYNCQ9H7C4 482 aa13.28□□□□□ -0.28
CACNB3-204ENST00000547230 ZWILCHQ9H900 591 aa13.28□□□□□ -0.28
CACNB3-204ENST00000547230 SLC38A10Q9HBR0 1119 aa13.28□□□□□ -0.28
CACNB3-204ENST00000547230 XPO7Q9UIA9 1087 aaKnown RBP13.28□□□□□ -0.28
CACNB3-204ENST00000547230 AGTPBP1Q9UPW5 1226 aa13.28□□□□□ -0.28
CACNB3-204ENST00000547230 C2CD2Q9Y426 696 aa13.28□□□□□ -0.28
CACNB3-204ENST00000547230 TGDSO95455 350 aa13.27□□□□□ -0.29
CACNB3-204ENST00000547230 RARBP10826 455 aa13.27□□□□□ -0.29
CACNB3-204ENST00000547230 SKIP12755 728 aa13.27□□□□□ -0.29
CACNB3-204ENST00000547230 IL1R2P27930 398 aa13.27□□□□□ -0.29
CACNB3-204ENST00000547230 CPA2P48052 419 aa13.27□□□□□ -0.29
CACNB3-204ENST00000547230 PAPOLAP51003 745 aaKnown RBP13.27□□□□□ -0.29
CACNB3-204ENST00000547230 PRKCEQ02156 737 aa13.27□□□□□ -0.29
CACNB3-204ENST00000547230 SLC25A11Q02978 314 aaKnown RBP13.27□□□□□ -0.29
CACNB3-204ENST00000547230 FAAP100Q0VG06 881 aa13.27□□□□□ -0.29
CACNB3-204ENST00000547230 NCOA4Q13772 614 aa13.27□□□□□ -0.29
CACNB3-204ENST00000547230 KCNT1Q5JUK3 1230 aa13.27□□□□□ -0.29
CACNB3-204ENST00000547230 ARHGEF16Q5VV41 709 aa13.27□□□□□ -0.29
CACNB3-204ENST00000547230 CCDC62Q6P9F0 684 aa13.27□□□□□ -0.29
CACNB3-204ENST00000547230 SH2D5Q6ZV89 423 aa13.27□□□□□ -0.29
CACNB3-204ENST00000547230 ALYREFQ86V81 257 aaKnown RBP13.27□□□□□ -0.29
CACNB3-204ENST00000547230 CCDC60Q8IWA6 550 aaPredicted RBP13.27□□□□□ -0.29
CACNB3-204ENST00000547230 WDTC1Q8N5D0 677 aa13.27□□□□□ -0.29
CACNB3-204ENST00000547230 NIPA2Q8N8Q9 360 aa13.27□□□□□ -0.29
CACNB3-204ENST00000547230 OXNAD1Q96HP4 312 aaPredicted RBP13.27□□□□□ -0.29
CACNB3-204ENST00000547230 NMUR2Q9GZQ4 415 aa13.27□□□□□ -0.29
CACNB3-204ENST00000547230 CYP26B1Q9NR63 512 aa13.27□□□□□ -0.29
CACNB3-204ENST00000547230 PAPOLBQ9NRJ5 636 aaKnown RBP13.27□□□□□ -0.29
CACNB3-204ENST00000547230 STX18Q9P2W9 335 aaKnown RBP13.27□□□□□ -0.29
CACNB3-204ENST00000547230 RGS17Q9UGC6 210 aaPredicted RBP13.27□□□□□ -0.29
CACNB3-204ENST00000547230 CNTNAP2Q9UHC6 1331 aa13.27□□□□□ -0.29
CACNB3-204ENST00000547230 FAM237BA0A1B0GVD1 139 aa13.27□□□□□ -0.29
CACNB3-204ENST00000547230 EDN1P05305 212 aa13.27□□□□□ -0.29
CACNB3-204ENST00000547230 AMPD1P23109 780 aa13.27□□□□□ -0.29
CACNB3-204ENST00000547230 AP1B1Q10567 949 aa13.27□□□□□ -0.29
CACNB3-204ENST00000547230 THOC5Q13769 683 aaKnown RBP13.27□□□□□ -0.29
CACNB3-204ENST00000547230 DLGAP5Q15398 846 aa13.27□□□□□ -0.29
CACNB3-204ENST00000547230 MTERF2Q49AM1 385 aa13.27□□□□□ -0.29
CACNB3-204ENST00000547230 ZNF394Q53GI3 561 aa13.27□□□□□ -0.29
CACNB3-204ENST00000547230 FOXB2Q5VYV0 432 aa13.27□□□□□ -0.29
CACNB3-204ENST00000547230 CWF19L1Q69YN2 538 aaKnown RBP13.27□□□□□ -0.29
CACNB3-204ENST00000547230 ARFGAP1Q8N6T3 406 aa13.27□□□□□ -0.29
CACNB3-204ENST00000547230 RSAD2Q8WXG1 361 aa13.27□□□□□ -0.29
CACNB3-204ENST00000547230 STMN2Q93045 179 aa13.27□□□□□ -0.29
CACNB3-204ENST00000547230 CYTH2Q99418 400 aa13.27□□□□□ -0.29
CACNB3-204ENST00000547230 VCXQ9H320 206 aa13.27□□□□□ -0.29
CACNB3-204ENST00000547230 MMADHCQ9H3L0 296 aaPredicted RBP13.27□□□□□ -0.29
CACNB3-204ENST00000547230 KRT82Q9NSB4 513 aa13.27□□□□□ -0.29
CACNB3-204ENST00000547230 CNTN3Q9P232 1028 aa13.27□□□□□ -0.29
CACNB3-204ENST00000547230 STRIP2Q9ULQ0 834 aa13.27□□□□□ -0.29
CACNB3-204ENST00000547230 PSME4Q14997 1843 aa13.26□□□□□ -0.29
CACNB3-204ENST00000547230 LSM8O95777 96 aaKnown RBP13.26□□□□□ -0.29
CACNB3-204ENST00000547230 ITGBL1O95965 494 aaPredicted RBP13.26□□□□□ -0.29
CACNB3-204ENST00000547230 CD48P09326 243 aa13.26□□□□□ -0.29
CACNB3-204ENST00000547230 PYGBP11216 843 aa13.26□□□□□ -0.29
CACNB3-204ENST00000547230 KCNA3P22001 575 aa13.26□□□□□ -0.29
CACNB3-204ENST00000547230 ELK3P41970 407 aa13.26□□□□□ -0.29
CACNB3-204ENST00000547230 SLC18A2Q05940 514 aa13.26□□□□□ -0.29
CACNB3-204ENST00000547230 KBTBD12Q3ZCT8 623 aa13.26□□□□□ -0.29
CACNB3-204ENST00000547230 AP1ARQ63HQ0 302 aa13.26□□□□□ -0.29
CACNB3-204ENST00000547230 GPAT2Q6NUI2 795 aa13.26□□□□□ -0.29
CACNB3-204ENST00000547230 RFX8Q6ZV50 586 aa13.26□□□□□ -0.29
CACNB3-204ENST00000547230 BBS12Q6ZW61 710 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms