RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 COMMD8Q9NX08 183 aa15.37■□□□□ 0.05
DDX54-203ENST00000546869 TAB2Q9NYJ8 693 aa15.37■□□□□ 0.05
DDX54-203ENST00000546869 GDE1Q9NZC3 331 aa15.37■□□□□ 0.05
DDX54-203ENST00000546869 EHD2Q9NZN4 543 aa15.37■□□□□ 0.05
DDX54-203ENST00000546869 ZMYM5Q9UJ78 669 aa15.37■□□□□ 0.05
DDX54-203ENST00000546869 DAAM1Q9Y4D1 1078 aa15.37■□□□□ 0.05
DDX54-203ENST00000546869 VDRP11473 427 aa15.36■□□□□ 0.05
DDX54-203ENST00000546869 LAMP2P13473 410 aa15.36■□□□□ 0.05
DDX54-203ENST00000546869 RFX1P22670 979 aa15.36■□□□□ 0.05
DDX54-203ENST00000546869 ANXA13P27216 316 aa15.36■□□□□ 0.05
DDX54-203ENST00000546869 NTHL1P78549 312 aa15.36■□□□□ 0.05
DDX54-203ENST00000546869 FKBP15Q5T1M5 1219 aa15.36■□□□□ 0.05
DDX54-203ENST00000546869 LRSAM1Q6UWE0 723 aa15.36■□□□□ 0.05
DDX54-203ENST00000546869 SLC2A14Q8TDB8 520 aa15.36■□□□□ 0.05
DDX54-203ENST00000546869 KAT5Q92993 513 aa15.36■□□□□ 0.05
DDX54-203ENST00000546869 RPGRIP1Q96KN7 1286 aa15.36■□□□□ 0.05
DDX54-203ENST00000546869 TTLL2Q9BWV7 592 aa15.36■□□□□ 0.05
DDX54-203ENST00000546869 UBXN6Q9BZV1 441 aa15.36■□□□□ 0.05
DDX54-203ENST00000546869 VPS16Q9H269 839 aa15.36■□□□□ 0.05
DDX54-203ENST00000546869 CBX8Q9HC52 389 aa15.36■□□□□ 0.05
DDX54-203ENST00000546869 PNPLA8Q9NP80 782 aa15.36■□□□□ 0.05
DDX54-203ENST00000546869 IL37Q9NZH6 218 aa15.36■□□□□ 0.05
DDX54-203ENST00000546869 UXTQ9UBK9 157 aaPredicted RBP15.36■□□□□ 0.05
DDX54-203ENST00000546869 CDH7Q9ULB5 785 aa15.36■□□□□ 0.05
DDX54-203ENST00000546869 MRPS23Q9Y3D9 190 aaKnown RBP15.36■□□□□ 0.05
DDX54-203ENST00000546869 SLC38A8A6NNN8 435 aa15.35■□□□□ 0.05
DDX54-203ENST00000546869 C2CD4DB7Z1M9 353 aa15.35■□□□□ 0.05
DDX54-203ENST00000546869 F8VP50 259 aa15.35■□□□□ 0.05
DDX54-203ENST00000546869 CLDN5O00501 218 aa15.35■□□□□ 0.05
DDX54-203ENST00000546869 MOSPD3O75425 235 aa15.35■□□□□ 0.05
DDX54-203ENST00000546869 WEE1P30291 646 aa15.35■□□□□ 0.05
DDX54-203ENST00000546869 CDC25CP30307 473 aa15.35■□□□□ 0.05
DDX54-203ENST00000546869 CCR2P41597 374 aa15.35■□□□□ 0.05
DDX54-203ENST00000546869 GPR15P49685 360 aa15.35■□□□□ 0.05
DDX54-203ENST00000546869 ZNF132P52740 706 aa15.35■□□□□ 0.05
DDX54-203ENST00000546869 ORC1Q13415 861 aa15.35■□□□□ 0.05
DDX54-203ENST00000546869 STILQ15468 1287 aa15.35■□□□□ 0.05
DDX54-203ENST00000546869 TAF12Q16514 161 aa15.35■□□□□ 0.05
DDX54-203ENST00000546869 SLC5A9Q2M3M2 681 aa15.35■□□□□ 0.05
DDX54-203ENST00000546869 ZNF394Q53GI3 561 aa15.35■□□□□ 0.05
DDX54-203ENST00000546869 KLHDC7AQ5VTJ3 777 aa15.35■□□□□ 0.05
DDX54-203ENST00000546869 TMEM270Q6UE05 265 aa15.35■□□□□ 0.05
DDX54-203ENST00000546869 DENND5BQ6ZUT9 1274 aa15.35■□□□□ 0.05
DDX54-203ENST00000546869 SCN4BQ8IWT1 228 aa15.35■□□□□ 0.05
DDX54-203ENST00000546869 HS6ST3Q8IZP7 471 aa15.35■□□□□ 0.05
DDX54-203ENST00000546869 TDRD5Q8NAT2 981 aaKnown RBP15.35■□□□□ 0.05
DDX54-203ENST00000546869 ITFG1Q8TB96 612 aa15.35■□□□□ 0.05
DDX54-203ENST00000546869 GIPC2Q8TF65 315 aa15.35■□□□□ 0.05
DDX54-203ENST00000546869 FGF13Q92913 245 aa15.35■□□□□ 0.05
DDX54-203ENST00000546869 NXPE3Q969Y0 559 aa15.35■□□□□ 0.05
DDX54-203ENST00000546869 MYADMQ96S97 322 aa15.35■□□□□ 0.05
DDX54-203ENST00000546869 MED10Q9BTT4 135 aa15.35■□□□□ 0.05
DDX54-203ENST00000546869 IL21Q9HBE4 155 aa15.35■□□□□ 0.05
DDX54-203ENST00000546869 DMAP1Q9NPF5 467 aaPredicted RBP15.35■□□□□ 0.05
DDX54-203ENST00000546869 TMEM30AQ9NV96 361 aa15.35■□□□□ 0.05
DDX54-203ENST00000546869 PCDHB4Q9Y5E5 795 aa15.35■□□□□ 0.05
DDX54-203ENST00000546869 FAM92AA1XBS5 289 aa15.34■□□□□ 0.05
DDX54-203ENST00000546869 LGALS16A8MUM7 142 aa15.34■□□□□ 0.05
DDX54-203ENST00000546869 RNF225M0QZC1 329 aaPredicted RBP15.34■□□□□ 0.05
DDX54-203ENST00000546869 TNFRSF10BO14763 440 aa15.34■□□□□ 0.05
DDX54-203ENST00000546869 AP1G2O75843 785 aa15.34■□□□□ 0.05
DDX54-203ENST00000546869 F11P03951 625 aa15.34■□□□□ 0.05
DDX54-203ENST00000546869 FAM200BP0CF97 657 aa15.34■□□□□ 0.05
DDX54-203ENST00000546869 ATP1A3P13637 1013 aa15.34■□□□□ 0.05
DDX54-203ENST00000546869 CCDC130P13994 396 aa15.34■□□□□ 0.05
DDX54-203ENST00000546869 PPP3CCP48454 512 aa15.34■□□□□ 0.05
DDX54-203ENST00000546869 CDR1P51861 262 aa15.34■□□□□ 0.05
DDX54-203ENST00000546869 CACNA2D1P54289 1103 aa15.34■□□□□ 0.05
DDX54-203ENST00000546869 TPM4P67936 248 aa15.34■□□□□ 0.05
DDX54-203ENST00000546869 CNGA2Q16280 664 aa15.34■□□□□ 0.05
DDX54-203ENST00000546869 SGO2Q562F6 1265 aa15.34■□□□□ 0.05
DDX54-203ENST00000546869 PPP1R26Q5T8A7 1209 aaPredicted RBP15.34■□□□□ 0.05
DDX54-203ENST00000546869 CLEC20AQ6ZU45 233 aa15.34■□□□□ 0.05
DDX54-203ENST00000546869 GAREM2Q75VX8 874 aa15.34■□□□□ 0.05
DDX54-203ENST00000546869 ANKRD52Q8NB46 1076 aa15.34■□□□□ 0.05
DDX54-203ENST00000546869 ZMIZ2Q8NF64 920 aa15.34■□□□□ 0.05
DDX54-203ENST00000546869 SHC3Q92529 594 aa15.34■□□□□ 0.05
DDX54-203ENST00000546869 ERGIC2Q96RQ1 377 aa15.34■□□□□ 0.05
DDX54-203ENST00000546869 KCNK16Q96T55 309 aa15.34■□□□□ 0.05
DDX54-203ENST00000546869 SMOQ99835 787 aa15.34■□□□□ 0.05
DDX54-203ENST00000546869 NAA15Q9BXJ9 866 aaKnown RBP15.34■□□□□ 0.05
DDX54-203ENST00000546869 DUSP16Q9BY84 665 aa15.34■□□□□ 0.05
DDX54-203ENST00000546869 ZNF334Q9HCZ1 680 aaPredicted RBP15.34■□□□□ 0.05
DDX54-203ENST00000546869 CD320Q9NPF0 282 aa15.34■□□□□ 0.05
DDX54-203ENST00000546869 FAM49BQ9NUQ9 324 aa15.34■□□□□ 0.05
DDX54-203ENST00000546869 IGSF9Q9P2J2 1179 aa15.34■□□□□ 0.05
DDX54-203ENST00000546869 DNAJC12Q9UKB3 198 aa15.34■□□□□ 0.05
DDX54-203ENST00000546869 C2orf16Q68DN1 1984 aa15.34■□□□□ 0.05
DDX54-203ENST00000546869 DENND4AQ7Z401 1863 aa15.33■□□□□ 0.05
DDX54-203ENST00000546869 ANHXE9PGG2 379 aa15.33■□□□□ 0.04
DDX54-203ENST00000546869 PES1O00541 588 aaKnown RBP15.33■□□□□ 0.04
DDX54-203ENST00000546869 RTN3O95197 1032 aaPredicted RBP15.33■□□□□ 0.04
DDX54-203ENST00000546869 MYL4P12829 197 aa15.33■□□□□ 0.04
DDX54-203ENST00000546869 DDX6P26196 483 aaKnown RBP eCLIP15.33■□□□□ 0.04
DDX54-203ENST00000546869 GBP2P32456 591 aaPredicted RBP15.33■□□□□ 0.04
DDX54-203ENST00000546869 ZNF445P59923 1031 aa15.33■□□□□ 0.04
DDX54-203ENST00000546869 MEA1Q16626 185 aa15.33■□□□□ 0.04
DDX54-203ENST00000546869 SDHAF4Q5VUM1 108 aa15.33■□□□□ 0.04
DDX54-203ENST00000546869 LCLAT1Q6UWP7 414 aa15.33■□□□□ 0.04
DDX54-203ENST00000546869 GET4Q7L5D6 327 aaPredicted RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms