RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 MYH16Q9H6N6 1097 aa7.29□□□□□ -1.24
NPAS3-204ENST00000546849 SLC2A4RGQ9NR83 387 aa7.29□□□□□ -1.24
NPAS3-204ENST00000546849 TRMT13Q9NUP7 481 aaKnown RBP7.29□□□□□ -1.24
NPAS3-204ENST00000546849 SERTAD3Q9UJW9 196 aa7.29□□□□□ -1.24
NPAS3-204ENST00000546849 MRPS17Q9Y2R5 130 aaKnown RBP7.29□□□□□ -1.24
NPAS3-204ENST00000546849 CDY1Q9Y6F8 540 aa7.29□□□□□ -1.24
NPAS3-204ENST00000546849 TMEM200CA6NKL6 621 aa7.28□□□□□ -1.24
NPAS3-204ENST00000546849 LPXNO60711 386 aa7.28□□□□□ -1.24
NPAS3-204ENST00000546849 SRGAP2O75044 1071 aa7.28□□□□□ -1.24
NPAS3-204ENST00000546849 ADRB1P08588 477 aa7.28□□□□□ -1.24
NPAS3-204ENST00000546849 NR4A1P22736 598 aa7.28□□□□□ -1.24
NPAS3-204ENST00000546849 EEF1GP26641 437 aaKnown RBP7.28□□□□□ -1.24
NPAS3-204ENST00000546849 PRKAR1BP31321 381 aa7.28□□□□□ -1.24
NPAS3-204ENST00000546849 MYO1EQ12965 1108 aa7.28□□□□□ -1.24
NPAS3-204ENST00000546849 GRAMD1BQ3KR37 738 aa7.28□□□□□ -1.24
NPAS3-204ENST00000546849 CATSPERGQ6ZRH7 1159 aa7.28□□□□□ -1.24
NPAS3-204ENST00000546849 SPRED1Q7Z699 444 aa7.28□□□□□ -1.24
NPAS3-204ENST00000546849 LCORLQ8N3X6 602 aa7.28□□□□□ -1.24
NPAS3-204ENST00000546849 POF1BQ8WVV4 589 aa7.28□□□□□ -1.24
NPAS3-204ENST00000546849 MUL1Q969V5 352 aa7.28□□□□□ -1.24
NPAS3-204ENST00000546849 LENG9Q96B70 501 aa7.28□□□□□ -1.24
NPAS3-204ENST00000546849 LTV1Q96GA3 475 aaPredicted RBP7.28□□□□□ -1.24
NPAS3-204ENST00000546849 ADAM2Q99965 735 aa7.28□□□□□ -1.24
NPAS3-204ENST00000546849 FAM83DQ9H4H8 585 aa7.28□□□□□ -1.24
NPAS3-204ENST00000546849 XPNPEP3Q9NQH7 507 aa7.28□□□□□ -1.24
NPAS3-204ENST00000546849 NDRG4Q9ULP0 352 aaKnown RBP7.28□□□□□ -1.24
NPAS3-204ENST00000546849 MAN2B2Q9Y2E5 1009 aa7.28□□□□□ -1.24
NPAS3-204ENST00000546849 CLCA1A8K7I4 914 aa7.27□□□□□ -1.25
NPAS3-204ENST00000546849 PODXLO00592 558 aa7.27□□□□□ -1.25
NPAS3-204ENST00000546849 AREL1O15033 823 aa7.27□□□□□ -1.25
NPAS3-204ENST00000546849 PLSCR1O15162 318 aa7.27□□□□□ -1.25
NPAS3-204ENST00000546849 EIF3JO75822 258 aaKnown RBP7.27□□□□□ -1.25
NPAS3-204ENST00000546849 PPP3CBP16298 524 aa7.27□□□□□ -1.25
NPAS3-204ENST00000546849 HSPA7P48741 367 aa7.27□□□□□ -1.25
NPAS3-204ENST00000546849 PDE6CP51160 858 aa7.27□□□□□ -1.25
NPAS3-204ENST00000546849 DGKEP52429 567 aa7.27□□□□□ -1.25
NPAS3-204ENST00000546849 ITIH3Q06033 890 aa7.27□□□□□ -1.25
NPAS3-204ENST00000546849 TEDDM1Q5T9Z0 273 aa7.27□□□□□ -1.25
NPAS3-204ENST00000546849 MZT2AQ6P582 158 aa7.27□□□□□ -1.25
NPAS3-204ENST00000546849 ARHGEF19Q8IW93 802 aa7.27□□□□□ -1.25
NPAS3-204ENST00000546849 SSH3Q8TE77 659 aa7.27□□□□□ -1.25
NPAS3-204ENST00000546849 CRB3Q9BUF7 120 aa7.27□□□□□ -1.25
NPAS3-204ENST00000546849 ZCWPW1Q9H0M4 648 aa7.27□□□□□ -1.25
NPAS3-204ENST00000546849 GJB4Q9NTQ9 266 aa7.27□□□□□ -1.25
NPAS3-204ENST00000546849 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.27□□□□□ -1.25
NPAS3-204ENST00000546849 CENPVL1A0A0U1RR11 272 aa7.26□□□□□ -1.25
NPAS3-204ENST00000546849 HNRNPDLO14979 420 aaKnown RBP7.26□□□□□ -1.25
NPAS3-204ENST00000546849 ADAMTS3O15072 1205 aa7.26□□□□□ -1.25
NPAS3-204ENST00000546849 RRP9O43818 475 aaKnown RBP7.26□□□□□ -1.25
NPAS3-204ENST00000546849 BTF3P20290 206 aaKnown RBP7.26□□□□□ -1.25
NPAS3-204ENST00000546849 MAKP20794 623 aa7.26□□□□□ -1.25
NPAS3-204ENST00000546849 SF3B3Q15393 1217 aaKnown RBP7.26□□□□□ -1.25
NPAS3-204ENST00000546849 PDCD2Q16342 344 aaPredicted RBP7.26□□□□□ -1.25
NPAS3-204ENST00000546849 MPEG1Q2M385 716 aa7.26□□□□□ -1.25
NPAS3-204ENST00000546849 CERCAMQ5T4B2 595 aa7.26□□□□□ -1.25
NPAS3-204ENST00000546849 DEPDC1Q5TB30 811 aa7.26□□□□□ -1.25
NPAS3-204ENST00000546849 VPS53Q5VIR6 699 aa7.26□□□□□ -1.25
NPAS3-204ENST00000546849 PGBD2Q6P3X8 592 aa7.26□□□□□ -1.25
NPAS3-204ENST00000546849 DBX2Q6ZNG2 339 aa7.26□□□□□ -1.25
NPAS3-204ENST00000546849 TMPRSS9Q7Z410 1059 aa7.26□□□□□ -1.25
NPAS3-204ENST00000546849 EXOC8Q8IYI6 725 aa7.26□□□□□ -1.25
NPAS3-204ENST00000546849 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.26□□□□□ -1.25
NPAS3-204ENST00000546849 ZNF527Q8NB42 609 aa7.26□□□□□ -1.25
NPAS3-204ENST00000546849 SLC30A5Q8TAD4 765 aa7.26□□□□□ -1.25
NPAS3-204ENST00000546849 DNAJB14Q8TBM8 379 aa7.26□□□□□ -1.25
NPAS3-204ENST00000546849 ATRIPQ8WXE1 791 aa7.26□□□□□ -1.25
NPAS3-204ENST00000546849 TMEM41AQ96HV5 264 aa7.26□□□□□ -1.25
NPAS3-204ENST00000546849 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.26□□□□□ -1.25
NPAS3-204ENST00000546849 CXorf36Q9H7Y0 433 aa7.26□□□□□ -1.25
NPAS3-204ENST00000546849 C1QTNF3-AMACRE9PGA6 284 aa7.25□□□□□ -1.25
NPAS3-204ENST00000546849 PEX1O43933 1283 aa7.25□□□□□ -1.25
NPAS3-204ENST00000546849 KCNA3P22001 575 aa7.25□□□□□ -1.25
NPAS3-204ENST00000546849 GATA3P23771 443 aa7.25□□□□□ -1.25
NPAS3-204ENST00000546849 BLOC1S1P78537 153 aa7.25□□□□□ -1.25
NPAS3-204ENST00000546849 ICA1Q05084 483 aa7.25□□□□□ -1.25
NPAS3-204ENST00000546849 EIF2B5Q13144 721 aaKnown RBP7.25□□□□□ -1.25
NPAS3-204ENST00000546849 TRIM14Q14142 442 aa7.25□□□□□ -1.25
NPAS3-204ENST00000546849 MIIPQ5JXC2 388 aa7.25□□□□□ -1.25
NPAS3-204ENST00000546849 ABHD17BQ5VST6 288 aa7.25□□□□□ -1.25
NPAS3-204ENST00000546849 PLAG1Q6DJT9 500 aa7.25□□□□□ -1.25
NPAS3-204ENST00000546849 USP17L6PQ6QN14 398 aa7.25□□□□□ -1.25
NPAS3-204ENST00000546849 OSCP1Q8WVF1 389 aa7.25□□□□□ -1.25
NPAS3-204ENST00000546849 ZNF503Q96F45 646 aa7.25□□□□□ -1.25
NPAS3-204ENST00000546849 FBXL20Q96IG2 436 aa7.25□□□□□ -1.25
NPAS3-204ENST00000546849 ZNF668Q96K58 619 aaPredicted RBP7.25□□□□□ -1.25
NPAS3-204ENST00000546849 SNX27Q96L92 541 aa7.25□□□□□ -1.25
NPAS3-204ENST00000546849 WDR12Q9GZL7 423 aaKnown RBP7.25□□□□□ -1.25
NPAS3-204ENST00000546849 CYP4F11Q9HBI6 524 aa7.25□□□□□ -1.25
NPAS3-204ENST00000546849 PLEKHD1A6NEE1 506 aa7.24□□□□□ -1.25
NPAS3-204ENST00000546849 ZNF202O95125 648 aa7.24□□□□□ -1.25
NPAS3-204ENST00000546849 A1BGP04217 495 aa7.24□□□□□ -1.25
NPAS3-204ENST00000546849 ADH4P08319 380 aa7.24□□□□□ -1.25
NPAS3-204ENST00000546849 ZFP36P26651 326 aaKnown RBP7.24□□□□□ -1.25
NPAS3-204ENST00000546849 TRAPPC10P48553 1259 aa7.24□□□□□ -1.25
NPAS3-204ENST00000546849 COPAP53621 1224 aa7.24□□□□□ -1.25
NPAS3-204ENST00000546849 NXPH1P58417 271 aa7.24□□□□□ -1.25
NPAS3-204ENST00000546849 ELF2Q15723 593 aa7.24□□□□□ -1.25
NPAS3-204ENST00000546849 ZIK1Q3SY52 487 aaPredicted RBP7.24□□□□□ -1.25
NPAS3-204ENST00000546849 ANO1Q5XXA6 986 aa7.24□□□□□ -1.25
NPAS3-204ENST00000546849 KRT28Q7Z3Y7 464 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms