RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 ENOSF1Q7L5Y1 443 aa17.86■□□□□ 0.45
LTBR-215ENST00000546296 FAM35AQ86V20 835 aa17.86■□□□□ 0.45
LTBR-215ENST00000546296 FUKQ8N0W3 1084 aa17.86■□□□□ 0.45
LTBR-215ENST00000546296 SLC4A11Q8NBS3 891 aa17.86■□□□□ 0.45
LTBR-215ENST00000546296 ING5Q8WYH8 240 aa17.86■□□□□ 0.45
LTBR-215ENST00000546296 TCEAL4Q96EI5 215 aa17.86■□□□□ 0.45
LTBR-215ENST00000546296 SMARCD1Q96GM5 515 aa17.86■□□□□ 0.45
LTBR-215ENST00000546296 GCNAQ96QF7 691 aa17.86■□□□□ 0.45
LTBR-215ENST00000546296 MYADMQ96S97 322 aa17.86■□□□□ 0.45
LTBR-215ENST00000546296 APEX2Q9UBZ4 518 aa17.86■□□□□ 0.45
LTBR-215ENST00000546296 CDH7Q9ULB5 785 aa17.86■□□□□ 0.45
LTBR-215ENST00000546296 FAM200BP0CF97 657 aa17.85■□□□□ 0.45
LTBR-215ENST00000546296 KRT5P13647 590 aa17.85■□□□□ 0.45
LTBR-215ENST00000546296 CD19P15391 556 aa17.85■□□□□ 0.45
LTBR-215ENST00000546296 MTMR3Q13615 1198 aa17.85■□□□□ 0.45
LTBR-215ENST00000546296 SLC5A9Q2M3M2 681 aa17.85■□□□□ 0.45
LTBR-215ENST00000546296 GJB7Q6PEY0 223 aa17.85■□□□□ 0.45
LTBR-215ENST00000546296 PAQR9Q6ZVX9 377 aa17.85■□□□□ 0.45
LTBR-215ENST00000546296 STKLD1Q8NE28 680 aa17.85■□□□□ 0.45
LTBR-215ENST00000546296 FGF13Q92913 245 aa17.85■□□□□ 0.45
LTBR-215ENST00000546296 JAKMIP2Q96AA8 810 aa17.85■□□□□ 0.45
LTBR-215ENST00000546296 MCRS1Q96EZ8 462 aa17.85■□□□□ 0.45
LTBR-215ENST00000546296 SPATA17Q96L03 361 aa17.85■□□□□ 0.45
LTBR-215ENST00000546296 C8orf48Q96LL4 319 aa17.85■□□□□ 0.45
LTBR-215ENST00000546296 CEP295NLQ96MC4 621 aa17.85■□□□□ 0.45
LTBR-215ENST00000546296 KREMEN1Q96MU8 473 aa17.85■□□□□ 0.45
LTBR-215ENST00000546296 HNRNPABQ99729 332 aaKnown RBP17.85■□□□□ 0.45
LTBR-215ENST00000546296 CBX8Q9HC52 389 aa17.85■□□□□ 0.45
LTBR-215ENST00000546296 ZNF334Q9HCZ1 680 aaPredicted RBP17.85■□□□□ 0.45
LTBR-215ENST00000546296 KRT82Q9NSB4 513 aa17.85■□□□□ 0.45
LTBR-215ENST00000546296 LIMD1Q9UGP4 676 aa17.85■□□□□ 0.45
LTBR-215ENST00000546296 TCF20Q9UGU0 1960 aaKnown RBP17.85■□□□□ 0.45
LTBR-215ENST00000546296 KIAA1257Q9ULG3 409 aa17.85■□□□□ 0.45
LTBR-215ENST00000546296 ZFP37Q9Y6Q3 630 aaPredicted RBP17.85■□□□□ 0.45
LTBR-215ENST00000546296 A0A1W2PRU2 124 aa17.84■□□□□ 0.45
LTBR-215ENST00000546296 GOLGA6L19H0YKK7 550 aa17.84■□□□□ 0.45
LTBR-215ENST00000546296 MICAL2O94851 1124 aa17.84■□□□□ 0.45
LTBR-215ENST00000546296 ATP1A3P13637 1013 aa17.84■□□□□ 0.45
LTBR-215ENST00000546296 GJA1P17302 382 aa17.84■□□□□ 0.45
LTBR-215ENST00000546296 CEBPBP17676 345 aa17.84■□□□□ 0.45
LTBR-215ENST00000546296 ACO1P21399 889 aaKnown RBP17.84■□□□□ 0.45
LTBR-215ENST00000546296 GABRR2P28476 465 aa17.84■□□□□ 0.45
LTBR-215ENST00000546296 USP8P40818 1118 aa17.84■□□□□ 0.45
LTBR-215ENST00000546296 CCR2P41597 374 aa17.84■□□□□ 0.45
LTBR-215ENST00000546296 CACNA2D1P54289 1103 aa17.84■□□□□ 0.45
LTBR-215ENST00000546296 EPHA5P54756 1037 aa17.84■□□□□ 0.45
LTBR-215ENST00000546296 APBA1Q02410 837 aa17.84■□□□□ 0.45
LTBR-215ENST00000546296 IQCB1Q15051 598 aa17.84■□□□□ 0.45
LTBR-215ENST00000546296 ARHGAP44Q17R89 818 aa17.84■□□□□ 0.45
LTBR-215ENST00000546296 PRSS36Q5K4E3 855 aa17.84■□□□□ 0.45
LTBR-215ENST00000546296 TMC8Q8IU68 726 aa17.84■□□□□ 0.45
LTBR-215ENST00000546296 ZDHHC14Q8IZN3 488 aa17.84■□□□□ 0.45
LTBR-215ENST00000546296 UBR7Q8N806 425 aa17.84■□□□□ 0.45
LTBR-215ENST00000546296 RBBP8NLQ8NC74 664 aaPredicted RBP17.84■□□□□ 0.45
LTBR-215ENST00000546296 PCMTD1Q96MG8 357 aaPredicted RBP17.84■□□□□ 0.45
LTBR-215ENST00000546296 KCNK16Q96T55 309 aa17.84■□□□□ 0.45
LTBR-215ENST00000546296 LSM14BQ9BX40 385 aaKnown RBP17.84■□□□□ 0.45
LTBR-215ENST00000546296 COL25A1Q9BXS0 654 aaPredicted RBP17.84■□□□□ 0.45
LTBR-215ENST00000546296 LRRC3Q9BY71 257 aa17.84■□□□□ 0.45
LTBR-215ENST00000546296 HSD3B7Q9H2F3 369 aa17.84■□□□□ 0.45
LTBR-215ENST00000546296 ATXN3LQ9H3M9 355 aa17.84■□□□□ 0.45
LTBR-215ENST00000546296 CD320Q9NPF0 282 aa17.84■□□□□ 0.45
LTBR-215ENST00000546296 DMAP1Q9NPF5 467 aaPredicted RBP17.84■□□□□ 0.45
LTBR-215ENST00000546296 EHD2Q9NZN4 543 aa17.84■□□□□ 0.45
LTBR-215ENST00000546296 LRRC10BA6NIK2 292 aa17.83■□□□□ 0.44
LTBR-215ENST00000546296 NOL4O94818 638 aa17.83■□□□□ 0.44
LTBR-215ENST00000546296 PAEPP09466 180 aa17.83■□□□□ 0.44
LTBR-215ENST00000546296 VDRP11473 427 aa17.83■□□□□ 0.44
LTBR-215ENST00000546296 LAMP2P13473 410 aa17.83■□□□□ 0.44
LTBR-215ENST00000546296 HMGA1P17096 107 aaKnown RBP17.83■□□□□ 0.44
LTBR-215ENST00000546296 CDC25CP30307 473 aa17.83■□□□□ 0.44
LTBR-215ENST00000546296 MAP3K7CLP57077 242 aa17.83■□□□□ 0.44
LTBR-215ENST00000546296 UBXN1Q04323 297 aa17.83■□□□□ 0.44
LTBR-215ENST00000546296 TEAD2Q15562 447 aa17.83■□□□□ 0.44
LTBR-215ENST00000546296 ARHGAP15Q53QZ3 475 aa17.83■□□□□ 0.44
LTBR-215ENST00000546296 SGO2Q562F6 1265 aa17.83■□□□□ 0.44
LTBR-215ENST00000546296 PPP1R26Q5T8A7 1209 aaPredicted RBP17.83■□□□□ 0.44
LTBR-215ENST00000546296 DENND5BQ6ZUT9 1274 aa17.83■□□□□ 0.44
LTBR-215ENST00000546296 LUZP1Q86V48 1076 aa17.83■□□□□ 0.44
LTBR-215ENST00000546296 SHKBP1Q8TBC3 707 aa17.83■□□□□ 0.44
LTBR-215ENST00000546296 TSPY26PQ9H489 355 aa17.83■□□□□ 0.44
LTBR-215ENST00000546296 SLITRK6Q9H5Y7 841 aa17.83■□□□□ 0.44
LTBR-215ENST00000546296 GDE1Q9NZC3 331 aa17.83■□□□□ 0.44
LTBR-215ENST00000546296 EPS15L1Q9UBC2 864 aa17.83■□□□□ 0.44
LTBR-215ENST00000546296 UXTQ9UBK9 157 aaPredicted RBP17.83■□□□□ 0.44
LTBR-215ENST00000546296 DNAJC12Q9UKB3 198 aa17.83■□□□□ 0.44
LTBR-215ENST00000546296 C5orf42Q9H799 3197 aa17.83■□□□□ 0.44
LTBR-215ENST00000546296 LGALS16A8MUM7 142 aa17.82■□□□□ 0.44
LTBR-215ENST00000546296 RNF225M0QZC1 329 aaPredicted RBP17.82■□□□□ 0.44
LTBR-215ENST00000546296 SLC8A3P57103 927 aa17.82■□□□□ 0.44
LTBR-215ENST00000546296 KCNMA1Q12791 1236 aa17.82■□□□□ 0.44
LTBR-215ENST00000546296 IFRD2Q12894 506 aaPredicted RBP17.82■□□□□ 0.44
LTBR-215ENST00000546296 FILIP1LQ4L180 1135 aa17.82■□□□□ 0.44
LTBR-215ENST00000546296 ARHGAP17Q68EM7 881 aa17.82■□□□□ 0.44
LTBR-215ENST00000546296 RNF135Q8IUD6 432 aa17.82■□□□□ 0.44
LTBR-215ENST00000546296 NPAS3Q8IXF0 933 aa17.82■□□□□ 0.44
LTBR-215ENST00000546296 NUP93Q8N1F7 819 aa17.82■□□□□ 0.44
LTBR-215ENST00000546296 SMOQ99835 787 aa17.82■□□□□ 0.44
LTBR-215ENST00000546296 SIX2Q9NPC8 291 aa17.82■□□□□ 0.44
LTBR-215ENST00000546296 TMEM30AQ9NV96 361 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms