RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 IKQ13123 557 aaPredicted RBP8.24□□□□□ -1.09
UBR1-202ENST00000546274 SIX1Q15475 284 aaPredicted RBP8.24□□□□□ -1.09
UBR1-202ENST00000546274 EPC2Q52LR7 807 aa8.24□□□□□ -1.09
UBR1-202ENST00000546274 HSP90AA5PQ58FG0 334 aa8.24□□□□□ -1.09
UBR1-202ENST00000546274 TNFAIP8L3Q5GJ75 292 aa8.24□□□□□ -1.09
UBR1-202ENST00000546274 DEPDC1Q5TB30 811 aa8.24□□□□□ -1.09
UBR1-202ENST00000546274 PPP2R2DQ66LE6 453 aa8.24□□□□□ -1.09
UBR1-202ENST00000546274 TMEM174Q8WUU8 243 aa8.24□□□□□ -1.09
UBR1-202ENST00000546274 GRAMD1AQ96CP6 724 aa8.24□□□□□ -1.09
UBR1-202ENST00000546274 MAGEB18Q96M61 343 aa8.24□□□□□ -1.09
UBR1-202ENST00000546274 PCDHB18PQ96TA0 734 aa8.24□□□□□ -1.09
UBR1-202ENST00000546274 ZSWIM1Q9BR11 485 aa8.24□□□□□ -1.09
UBR1-202ENST00000546274 MRPL1Q9BYD6 325 aaKnown RBP8.24□□□□□ -1.09
UBR1-202ENST00000546274 NPHS2Q9NP85 383 aa8.24□□□□□ -1.09
UBR1-202ENST00000546274 ARL8BQ9NVJ2 186 aa8.24□□□□□ -1.09
UBR1-202ENST00000546274 CHORDC1Q9UHD1 332 aaPredicted RBP8.24□□□□□ -1.09
UBR1-202ENST00000546274 PCYOX1Q9UHG3 505 aa8.24□□□□□ -1.09
UBR1-202ENST00000546274 SSX2IPQ9Y2D8 614 aa8.24□□□□□ -1.09
UBR1-202ENST00000546274 ANKRD63C9JTQ0 380 aa8.24□□□□□ -1.09
UBR1-202ENST00000546274 RIPK2O43353 540 aa8.24□□□□□ -1.09
UBR1-202ENST00000546274 KDM1AO60341 852 aa8.24□□□□□ -1.09
UBR1-202ENST00000546274 MGEA5O60502 916 aa8.24□□□□□ -1.09
UBR1-202ENST00000546274 CHRNB2P17787 502 aa8.24□□□□□ -1.09
UBR1-202ENST00000546274 TCEA1P23193 301 aaKnown RBP8.24□□□□□ -1.09
UBR1-202ENST00000546274 PGM1P36871 562 aa8.24□□□□□ -1.09
UBR1-202ENST00000546274 RPL5P46777 297 aaKnown RBP8.24□□□□□ -1.09
UBR1-202ENST00000546274 MSLNQ13421 630 aaPredicted RBP8.24□□□□□ -1.09
UBR1-202ENST00000546274 PDK3Q15120 406 aa8.24□□□□□ -1.09
UBR1-202ENST00000546274 MYLK3Q32MK0 819 aa8.24□□□□□ -1.09
UBR1-202ENST00000546274 ZNF568Q3ZCX4 644 aa8.24□□□□□ -1.09
UBR1-202ENST00000546274 LPCAT4Q643R3 524 aa8.24□□□□□ -1.09
UBR1-202ENST00000546274 ARHGEF18Q6ZSZ5 1173 aa8.24□□□□□ -1.09
UBR1-202ENST00000546274 RHOT2Q8IXI1 618 aa8.24□□□□□ -1.09
UBR1-202ENST00000546274 RDH13Q8NBN7 331 aa8.24□□□□□ -1.09
UBR1-202ENST00000546274 COX4I2Q96KJ9 171 aa8.24□□□□□ -1.09
UBR1-202ENST00000546274 PRICKLE1Q96MT3 831 aaPredicted RBP8.24□□□□□ -1.09
UBR1-202ENST00000546274 KCND2Q9NZV8 630 aa8.24□□□□□ -1.09
UBR1-202ENST00000546274 NOCTQ9UK39 431 aaKnown RBP8.24□□□□□ -1.09
UBR1-202ENST00000546274 TELO2Q9Y4R8 837 aa8.24□□□□□ -1.09
UBR1-202ENST00000546274 COL2A1P02458 1487 aaPredicted RBP8.23□□□□□ -1.09
UBR1-202ENST00000546274 NOTOA8MTQ0 251 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 BTBD19C9JJ37 291 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 H3BSA7 217 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 NDC80O14777 642 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 TPPPO94811 219 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 CFBP00751 764 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 FTLP02792 175 aaPredicted RBP8.23□□□□□ -1.09
UBR1-202ENST00000546274 NPR1P16066 1061 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 MUTP22033 750 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 RFX1P22670 979 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 PCYT1AP49585 367 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 ZBTB16Q05516 673 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 STRN3Q13033 797 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 PPP2R5EQ16537 467 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 ZNF746Q6NUN9 644 aaPredicted RBP8.23□□□□□ -1.09
UBR1-202ENST00000546274 C3orf62Q6ZUJ4 267 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 NLRP9Q7RTR0 991 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 C11orf74Q86VG3 221 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 BPHLQ86WA6 291 aaPredicted RBP8.23□□□□□ -1.09
UBR1-202ENST00000546274 OR6Y1Q8NGX8 325 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 JDP2Q8WYK2 163 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 KAT5Q92993 513 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 GFM2Q969S9 779 aaKnown RBP8.23□□□□□ -1.09
UBR1-202ENST00000546274 LXNQ9BS40 222 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 NRDE2Q9H7Z3 1164 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 SEPT11Q9NVA2 429 aaKnown RBP8.23□□□□□ -1.09
UBR1-202ENST00000546274 MTUS1Q9ULD2 1270 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 CCPG1Q9ULG6 757 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 PPM1HQ9ULR3 514 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 RPL26L1Q9UNX3 145 aaKnown RBP8.23□□□□□ -1.09
UBR1-202ENST00000546274 MAD1L1Q9Y6D9 718 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 EMSYQ7Z589 1322 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 SYNGAP1Q96PV0 1343 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 ARID2Q68CP9 1835 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 ATMINO43313 823 aaPredicted RBP8.23□□□□□ -1.09
UBR1-202ENST00000546274 STRNO43815 780 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 GAS7O60861 476 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 TFAP2AP05549 437 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 VCLP18206 1134 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 STAT2P52630 851 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 CHN2P52757 468 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 IL9RQ01113 521 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 SFT2D3Q587I9 215 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 PODNQ7Z5L7 613 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 METTL25Q8N6Q8 603 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 GSDMBQ8TAX9 411 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 RAB3IL1Q8TBN0 382 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 CLPTM1LQ96KA5 538 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 NACC1Q96RE7 527 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 CCDC68Q9H2F9 335 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 RETREG1Q9H6L5 497 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 UBE2TQ9NPD8 197 aaPredicted RBP8.23□□□□□ -1.09
UBR1-202ENST00000546274 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.23□□□□□ -1.09
UBR1-202ENST00000546274 MTRF1LQ9UGC7 380 aaKnown RBP8.23□□□□□ -1.09
UBR1-202ENST00000546274 NUMBLQ9Y6R0 609 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 PFASO15067 1338 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 BRCA1P38398 1863 aaKnown RBP8.23□□□□□ -1.09
UBR1-202ENST00000546274 A0A0G2JND7 137 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 A6NL46 340 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 GOLGA8TH3BQL2 631 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms