RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 DEXIO95424 95 aa16.66■□□□□ 0.26
CLSTN3-216ENST00000545663 CKMP06732 381 aa16.66■□□□□ 0.26
CLSTN3-216ENST00000545663 HMGB1P09429 215 aaKnown RBP16.66■□□□□ 0.26
CLSTN3-216ENST00000545663 KRT10P13645 584 aa16.66■□□□□ 0.26
CLSTN3-216ENST00000545663 HLA-EP13747 358 aa16.66■□□□□ 0.26
CLSTN3-216ENST00000545663 LRPAP1P30533 357 aa16.66■□□□□ 0.26
CLSTN3-216ENST00000545663 CLDN6P56747 220 aa16.66■□□□□ 0.26
CLSTN3-216ENST00000545663 ZXDBP98169 803 aa16.66■□□□□ 0.26
CLSTN3-216ENST00000545663 SMAD1Q15797 465 aaKnown RBP16.66■□□□□ 0.26
CLSTN3-216ENST00000545663 CALCRLQ16602 461 aa16.66■□□□□ 0.26
CLSTN3-216ENST00000545663 C12orf40Q86WS4 652 aa16.66■□□□□ 0.26
CLSTN3-216ENST00000545663 FMNL3Q8IVF7 1028 aa16.66■□□□□ 0.26
CLSTN3-216ENST00000545663 ARL14EPQ8N8R7 260 aaPredicted RBP16.66■□□□□ 0.26
CLSTN3-216ENST00000545663 IFT74Q96LB3 600 aa16.66■□□□□ 0.26
CLSTN3-216ENST00000545663 KIF2CQ99661 725 aa16.66■□□□□ 0.26
CLSTN3-216ENST00000545663 ARID3AQ99856 593 aa16.66■□□□□ 0.26
CLSTN3-216ENST00000545663 IGSF5Q9NSI5 407 aa16.66■□□□□ 0.26
CLSTN3-216ENST00000545663 ABI2Q9NYB9 513 aaPredicted RBP16.66■□□□□ 0.26
CLSTN3-216ENST00000545663 TEP1Q99973 2627 aaKnown RBP16.66■□□□□ 0.26
CLSTN3-216ENST00000545663 ARHGEF35A5YM69 484 aa16.65■□□□□ 0.26
CLSTN3-216ENST00000545663 WNT7AO00755 349 aa16.65■□□□□ 0.26
CLSTN3-216ENST00000545663 SCAMP3O14828 347 aaKnown RBP16.65■□□□□ 0.26
CLSTN3-216ENST00000545663 NFATC1O95644 943 aa16.65■□□□□ 0.26
CLSTN3-216ENST00000545663 USP17L7P0C7H9 530 aa16.65■□□□□ 0.26
CLSTN3-216ENST00000545663 CXCL8P10145 99 aa16.65■□□□□ 0.26
CLSTN3-216ENST00000545663 WASP42768 502 aa16.65■□□□□ 0.26
CLSTN3-216ENST00000545663 BNC1Q01954 994 aa16.65■□□□□ 0.26
CLSTN3-216ENST00000545663 KDSRQ06136 332 aa16.65■□□□□ 0.26
CLSTN3-216ENST00000545663 KRT32Q14532 448 aa16.65■□□□□ 0.26
CLSTN3-216ENST00000545663 ZBTB6Q15916 424 aa16.65■□□□□ 0.26
CLSTN3-216ENST00000545663 DHRS13Q6UX07 377 aa16.65■□□□□ 0.26
CLSTN3-216ENST00000545663 ZNF419Q96HQ0 510 aaPredicted RBP16.65■□□□□ 0.26
CLSTN3-216ENST00000545663 JAKMIP1Q96N16 626 aaKnown RBP16.65■□□□□ 0.26
CLSTN3-216ENST00000545663 MRPL4Q9BYD3 311 aaKnown RBP16.65■□□□□ 0.26
CLSTN3-216ENST00000545663 FAM124BQ9H5Z6 455 aaPredicted RBP16.65■□□□□ 0.26
CLSTN3-216ENST00000545663 GAREM1Q9H706 876 aa16.65■□□□□ 0.26
CLSTN3-216ENST00000545663 TM7SF3Q9NS93 570 aa16.65■□□□□ 0.26
CLSTN3-216ENST00000545663 FLNCQ14315 2725 aa16.64■□□□□ 0.25
CLSTN3-216ENST00000545663 CITO14578 2027 aa16.64■□□□□ 0.25
CLSTN3-216ENST00000545663 TRAV19A0A0A6YYK7 116 aa16.64■□□□□ 0.25
CLSTN3-216ENST00000545663 C2orf78A6NCI8 922 aa16.64■□□□□ 0.25
CLSTN3-216ENST00000545663 CAPN8A6NHC0 703 aa16.64■□□□□ 0.25
CLSTN3-216ENST00000545663 CCDC169A6NNP5 214 aa16.64■□□□□ 0.25
CLSTN3-216ENST00000545663 CILPO75339 1184 aa16.64■□□□□ 0.25
CLSTN3-216ENST00000545663 CYP17A1P05093 508 aa16.64■□□□□ 0.25
CLSTN3-216ENST00000545663 LILRA4P59901 499 aa16.64■□□□□ 0.25
CLSTN3-216ENST00000545663 TAF1BQ53T94 588 aaPredicted RBP16.64■□□□□ 0.25
CLSTN3-216ENST00000545663 MPZL3Q6UWV2 235 aa16.64■□□□□ 0.25
CLSTN3-216ENST00000545663 PNKPQ96T60 521 aa16.64■□□□□ 0.25
CLSTN3-216ENST00000545663 NAP1L4Q99733 375 aaKnown RBP16.64■□□□□ 0.25
CLSTN3-216ENST00000545663 CDC6Q99741 560 aa16.64■□□□□ 0.25
CLSTN3-216ENST00000545663 TMLHEQ9NVH6 421 aa16.64■□□□□ 0.25
CLSTN3-216ENST00000545663 GCNT4Q9P109 453 aa16.64■□□□□ 0.25
CLSTN3-216ENST00000545663 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.64■□□□□ 0.25
CLSTN3-216ENST00000545663 OBSL1O75147 1896 aa16.64■□□□□ 0.25
CLSTN3-216ENST00000545663 MYMKA6NI61 221 aa16.63■□□□□ 0.25
CLSTN3-216ENST00000545663 B8ZZF3 427 aa16.63■□□□□ 0.25
CLSTN3-216ENST00000545663 RRP8O43159 456 aaKnown RBP16.63■□□□□ 0.25
CLSTN3-216ENST00000545663 ODC1P11926 461 aa16.63■□□□□ 0.25
CLSTN3-216ENST00000545663 NPTX2P47972 431 aa16.63■□□□□ 0.25
CLSTN3-216ENST00000545663 PEX3P56589 373 aa16.63■□□□□ 0.25
CLSTN3-216ENST00000545663 CXADRP78310 365 aa16.63■□□□□ 0.25
CLSTN3-216ENST00000545663 DDR2Q16832 855 aa16.63■□□□□ 0.25
CLSTN3-216ENST00000545663 HSF5Q4G112 596 aaPredicted RBP16.63■□□□□ 0.25
CLSTN3-216ENST00000545663 DBX2Q6ZNG2 339 aa16.63■□□□□ 0.25
CLSTN3-216ENST00000545663 LARP6Q9BRS8 491 aaKnown RBP16.63■□□□□ 0.25
CLSTN3-216ENST00000545663 PI4K2AQ9BTU6 479 aa16.63■□□□□ 0.25
CLSTN3-216ENST00000545663 ZDHHC5Q9C0B5 715 aa16.63■□□□□ 0.25
CLSTN3-216ENST00000545663 SLC6A17Q9H1V8 727 aa16.63■□□□□ 0.25
CLSTN3-216ENST00000545663 TMEM206Q9H813 350 aa16.63■□□□□ 0.25
CLSTN3-216ENST00000545663 HCN2Q9UL51 889 aa16.63■□□□□ 0.25
CLSTN3-216ENST00000545663 MYO9AB2RTY4 2548 aa16.63■□□□□ 0.25
CLSTN3-216ENST00000545663 COL5A1P20908 1838 aaPredicted RBP16.63■□□□□ 0.25
CLSTN3-216ENST00000545663 A0A0A0MRY4 1105 aa16.62■□□□□ 0.25
CLSTN3-216ENST00000545663 APODP05090 189 aa16.62■□□□□ 0.25
CLSTN3-216ENST00000545663 GNSP15586 552 aa16.62■□□□□ 0.25
CLSTN3-216ENST00000545663 LY6DQ14210 128 aa16.62■□□□□ 0.25
CLSTN3-216ENST00000545663 HLA-BQ31612 363 aa16.62■□□□□ 0.25
CLSTN3-216ENST00000545663 FILIP1Q7Z7B0 1213 aa16.62■□□□□ 0.25
CLSTN3-216ENST00000545663 MIB1Q86YT6 1006 aa16.62■□□□□ 0.25
CLSTN3-216ENST00000545663 ADGRG2Q8IZP9 1017 aa16.62■□□□□ 0.25
CLSTN3-216ENST00000545663 ZCCHC9Q8N567 271 aaKnown RBP16.62■□□□□ 0.25
CLSTN3-216ENST00000545663 AGXT2Q9BYV1 514 aa16.62■□□□□ 0.25
CLSTN3-216ENST00000545663 TUFT1Q9NNX1 390 aa16.62■□□□□ 0.25
CLSTN3-216ENST00000545663 ARHGEF4Q9NR80 690 aa16.62■□□□□ 0.25
CLSTN3-216ENST00000545663 DAXXQ9UER7 740 aaPredicted RBP16.62■□□□□ 0.25
CLSTN3-216ENST00000545663 SUSD2Q9UGT4 822 aa16.62■□□□□ 0.25
CLSTN3-216ENST00000545663 PHLPP2Q6ZVD8 1323 aa16.62■□□□□ 0.25
CLSTN3-216ENST00000545663 STK36Q9NRP7 1315 aa16.62■□□□□ 0.25
CLSTN3-216ENST00000545663 KNTC1P50748 2209 aa16.62■□□□□ 0.25
CLSTN3-216ENST00000545663 BOD1L1Q8NFC6 3051 aa16.61■□□□□ 0.25
CLSTN3-216ENST00000545663 A0A1W2PQF6 199 aa16.61■□□□□ 0.25
CLSTN3-216ENST00000545663 TTC26A0AVF1 554 aa16.61■□□□□ 0.25
CLSTN3-216ENST00000545663 BTBD18B2RXH4 712 aa16.61■□□□□ 0.25
CLSTN3-216ENST00000545663 NDUFV2P19404 249 aa16.61■□□□□ 0.25
CLSTN3-216ENST00000545663 TNFRSF4P43489 277 aa16.61■□□□□ 0.25
CLSTN3-216ENST00000545663 NR5A1Q13285 461 aa16.61■□□□□ 0.25
CLSTN3-216ENST00000545663 DHCR24Q15392 516 aa16.61■□□□□ 0.25
CLSTN3-216ENST00000545663 SAFBQ15424 915 aaKnown RBP eCLIP16.61■□□□□ 0.25
CLSTN3-216ENST00000545663 PTPRNQ16849 979 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms