RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 CHFRQ96EP1 664 aa22.58■■□□□ 1.21
SCARB1-210ENST00000545493 PCED1BQ96HM7 432 aa22.58■■□□□ 1.21
SCARB1-210ENST00000545493 FAM83CQ9BQN1 747 aa22.58■■□□□ 1.21
SCARB1-210ENST00000545493 DMAC2Q9NW81 257 aa22.58■■□□□ 1.21
SCARB1-210ENST00000545493 ZSCAN32Q9NX65 697 aa22.58■■□□□ 1.21
SCARB1-210ENST00000545493 EP300Q09472 2414 aaPredicted RBP22.58■■□□□ 1.2
SCARB1-210ENST00000545493 SPTBN4Q9H254 2564 aa22.57■■□□□ 1.2
SCARB1-210ENST00000545493 SOBPA7XYQ1 873 aa22.57■■□□□ 1.2
SCARB1-210ENST00000545493 LILRB5O75023 590 aa22.57■■□□□ 1.2
SCARB1-210ENST00000545493 PDGFRBP09619 1106 aa22.57■■□□□ 1.2
SCARB1-210ENST00000545493 BDNFP23560 247 aa22.57■■□□□ 1.2
SCARB1-210ENST00000545493 MYL6P60660 151 aa22.57■■□□□ 1.2
SCARB1-210ENST00000545493 TNNC1P63316 161 aa22.57■■□□□ 1.2
SCARB1-210ENST00000545493 CYP27A1Q02318 531 aa22.57■■□□□ 1.2
SCARB1-210ENST00000545493 USP4Q13107 963 aa22.57■■□□□ 1.2
SCARB1-210ENST00000545493 ZNF268Q14587 947 aaPredicted RBP22.57■■□□□ 1.2
SCARB1-210ENST00000545493 MDH1BQ5I0G3 518 aa22.57■■□□□ 1.2
SCARB1-210ENST00000545493 TRIM68Q6AZZ1 485 aa22.57■■□□□ 1.2
SCARB1-210ENST00000545493 MYCBPAPQ8TBZ2 947 aa22.57■■□□□ 1.2
SCARB1-210ENST00000545493 SLC22A12Q96S37 553 aa22.57■■□□□ 1.2
SCARB1-210ENST00000545493 TDP1Q9NUW8 608 aa22.57■■□□□ 1.2
SCARB1-210ENST00000545493 MAGEC2Q9UBF1 373 aaPredicted RBP22.57■■□□□ 1.2
SCARB1-210ENST00000545493 USP25Q9UHP3 1055 aa22.57■■□□□ 1.2
SCARB1-210ENST00000545493 NDUFA8P51970 172 aa22.56■■□□□ 1.2
SCARB1-210ENST00000545493 SATB1Q01826 763 aa22.56■■□□□ 1.2
SCARB1-210ENST00000545493 LRRC32Q14392 662 aa22.56■■□□□ 1.2
SCARB1-210ENST00000545493 PON2Q15165 354 aa22.56■■□□□ 1.2
SCARB1-210ENST00000545493 ZNF77Q15935 545 aa22.56■■□□□ 1.2
SCARB1-210ENST00000545493 WDR72Q3MJ13 1102 aa22.56■■□□□ 1.2
SCARB1-210ENST00000545493 VSTM1Q6UX27 236 aa22.56■■□□□ 1.2
SCARB1-210ENST00000545493 MAMSTRQ6ZN01 415 aa22.56■■□□□ 1.2
SCARB1-210ENST00000545493 SLC9A9Q8IVB4 645 aa22.56■■□□□ 1.2
SCARB1-210ENST00000545493 PARD3BQ8TEW8 1205 aa22.56■■□□□ 1.2
SCARB1-210ENST00000545493 TMEM174Q8WUU8 243 aa22.56■■□□□ 1.2
SCARB1-210ENST00000545493 TRPC7Q9HCX4 862 aa22.56■■□□□ 1.2
SCARB1-210ENST00000545493 TMEM30AQ9NV96 361 aa22.56■■□□□ 1.2
SCARB1-210ENST00000545493 OTOL1A6NHN0 477 aaPredicted RBP22.55■■□□□ 1.2
SCARB1-210ENST00000545493 MYL1P05976 194 aa22.55■■□□□ 1.2
SCARB1-210ENST00000545493 CCR3P51677 355 aa22.55■■□□□ 1.2
SCARB1-210ENST00000545493 CACNA2D1P54289 1103 aa22.55■■□□□ 1.2
SCARB1-210ENST00000545493 USP46P62068 366 aa22.55■■□□□ 1.2
SCARB1-210ENST00000545493 CLDN10P78369 228 aa22.55■■□□□ 1.2
SCARB1-210ENST00000545493 PSMD2Q13200 908 aa22.55■■□□□ 1.2
SCARB1-210ENST00000545493 TRPC3Q13507 836 aa22.55■■□□□ 1.2
SCARB1-210ENST00000545493 CCINQ13939 588 aa22.55■■□□□ 1.2
SCARB1-210ENST00000545493 MAPRE1Q15691 268 aaKnown RBP22.55■■□□□ 1.2
SCARB1-210ENST00000545493 ITPRIPL2Q3MIP1 535 aa22.55■■□□□ 1.2
SCARB1-210ENST00000545493 OR6B3Q8NGW1 331 aa22.55■■□□□ 1.2
SCARB1-210ENST00000545493 SPATA17Q96L03 361 aa22.55■■□□□ 1.2
SCARB1-210ENST00000545493 EPC1Q9H2F5 836 aa22.55■■□□□ 1.2
SCARB1-210ENST00000545493 SNX25Q9H3E2 840 aa22.55■■□□□ 1.2
SCARB1-210ENST00000545493 GOLPH3LQ9H4A5 285 aa22.55■■□□□ 1.2
SCARB1-210ENST00000545493 EBF3Q9H4W6 596 aa22.55■■□□□ 1.2
SCARB1-210ENST00000545493 SMYD3Q9H7B4 428 aa22.55■■□□□ 1.2
SCARB1-210ENST00000545493 VRTNQ9H8Y1 702 aa22.55■■□□□ 1.2
SCARB1-210ENST00000545493 THG1LQ9NWX6 298 aaKnown RBP22.55■■□□□ 1.2
SCARB1-210ENST00000545493 GCNT4Q9P109 453 aa22.55■■□□□ 1.2
SCARB1-210ENST00000545493 C2orf78A6NCI8 922 aa22.54■■□□□ 1.2
SCARB1-210ENST00000545493 NR3C1P04150 777 aa22.54■■□□□ 1.2
SCARB1-210ENST00000545493 RPN1P04843 607 aaKnown RBP22.54■■□□□ 1.2
SCARB1-210ENST00000545493 ARSAP15289 507 aa22.54■■□□□ 1.2
SCARB1-210ENST00000545493 ATICP31939 592 aa22.54■■□□□ 1.2
SCARB1-210ENST00000545493 GNL1P36915 607 aaPredicted RBP22.54■■□□□ 1.2
SCARB1-210ENST00000545493 SYKP43405 635 aa22.54■■□□□ 1.2
SCARB1-210ENST00000545493 FAM160A1Q05DH4 1040 aa22.54■■□□□ 1.2
SCARB1-210ENST00000545493 BIRC3Q13489 604 aa22.54■■□□□ 1.2
SCARB1-210ENST00000545493 MTF1Q14872 753 aa22.54■■□□□ 1.2
SCARB1-210ENST00000545493 SYAP1Q96A49 352 aaPredicted RBP22.54■■□□□ 1.2
SCARB1-210ENST00000545493 ELMO3Q96BJ8 720 aa22.54■■□□□ 1.2
SCARB1-210ENST00000545493 GKN1Q9NS71 199 aa22.54■■□□□ 1.2
SCARB1-210ENST00000545493 C2orf42Q9NWW7 574 aa22.54■■□□□ 1.2
SCARB1-210ENST00000545493 NXF1Q9UBU9 619 aaKnown RBP22.54■■□□□ 1.2
SCARB1-210ENST00000545493 TRAV19A0A0A6YYK7 116 aa22.53■■□□□ 1.2
SCARB1-210ENST00000545493 F8VP50 259 aa22.53■■□□□ 1.2
SCARB1-210ENST00000545493 PDXKO00764 312 aa22.53■■□□□ 1.2
SCARB1-210ENST00000545493 TRIM66O15016 1216 aa22.53■■□□□ 1.2
SCARB1-210ENST00000545493 VNN1O95497 513 aa22.53■■□□□ 1.2
SCARB1-210ENST00000545493 C4BPAP04003 597 aaKnown RBP22.53■■□□□ 1.2
SCARB1-210ENST00000545493 CKMP06732 381 aa22.53■■□□□ 1.2
SCARB1-210ENST00000545493 GRIK1P39086 918 aa22.53■■□□□ 1.2
SCARB1-210ENST00000545493 RAP1GAPP47736 663 aa22.53■■□□□ 1.2
SCARB1-210ENST00000545493 DLG4P78352 724 aa22.53■■□□□ 1.2
SCARB1-210ENST00000545493 RUNX3Q13761 415 aa22.53■■□□□ 1.2
SCARB1-210ENST00000545493 ZNF699Q32M78 642 aa22.53■■□□□ 1.2
SCARB1-210ENST00000545493 SCARA5Q6ZMJ2 495 aa22.53■■□□□ 1.2
SCARB1-210ENST00000545493 DENND5BQ6ZUT9 1274 aa22.53■■□□□ 1.2
SCARB1-210ENST00000545493 ATRIPQ8WXE1 791 aa22.53■■□□□ 1.2
SCARB1-210ENST00000545493 TTLL2Q9BWV7 592 aa22.53■■□□□ 1.2
SCARB1-210ENST00000545493 FAM126AQ9BYI3 521 aaPredicted RBP22.53■■□□□ 1.2
SCARB1-210ENST00000545493 ZNF518BQ9C0D4 1074 aa22.53■■□□□ 1.2
SCARB1-210ENST00000545493 SMG5Q9UPR3 1016 aaKnown RBP22.53■■□□□ 1.2
SCARB1-210ENST00000545493 KIAA1549LQ6ZVL6 1849 aa22.52■■□□□ 1.2
SCARB1-210ENST00000545493 A8MXQ7 604 aa22.52■■□□□ 1.2
SCARB1-210ENST00000545493 FAM163BP0C2L3 166 aa22.52■■□□□ 1.2
SCARB1-210ENST00000545493 DPYDQ12882 1025 aa22.52■■□□□ 1.2
SCARB1-210ENST00000545493 NCOA4Q13772 614 aa22.52■■□□□ 1.2
SCARB1-210ENST00000545493 DGKKQ5KSL6 1271 aa22.52■■□□□ 1.2
SCARB1-210ENST00000545493 SPEM1Q8N4L4 309 aa22.52■■□□□ 1.2
SCARB1-210ENST00000545493 DCLK2Q8N568 766 aa22.52■■□□□ 1.2
SCARB1-210ENST00000545493 FSIP1Q8NA03 581 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms