RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 TUFMP49411 452 aaKnown RBP7.91□□□□□ -1.14
CPSF7-224ENST00000544990 ZXDAP98168 799 aa7.91□□□□□ -1.14
CPSF7-224ENST00000544990 MYL7Q01449 175 aa7.91□□□□□ -1.14
CPSF7-224ENST00000544990 TSPY1Q01534 308 aa7.91□□□□□ -1.14
CPSF7-224ENST00000544990 POU4F2Q12837 409 aa7.91□□□□□ -1.14
CPSF7-224ENST00000544990 TRPC3Q13507 836 aa7.91□□□□□ -1.14
CPSF7-224ENST00000544990 PNOCQ13519 176 aa7.91□□□□□ -1.14
CPSF7-224ENST00000544990 LAPTM4AQ15012 233 aa7.91□□□□□ -1.14
CPSF7-224ENST00000544990 PABPC1LQ4VXU2 614 aaKnown RBP7.91□□□□□ -1.14
CPSF7-224ENST00000544990 WDR44Q5JSH3 913 aa7.91□□□□□ -1.14
CPSF7-224ENST00000544990 WSCD1Q658N2 575 aa7.91□□□□□ -1.14
CPSF7-224ENST00000544990 GET4Q7L5D6 327 aaPredicted RBP7.91□□□□□ -1.14
CPSF7-224ENST00000544990 TRAPPC11Q7Z392 1133 aa7.91□□□□□ -1.14
CPSF7-224ENST00000544990 ELOA2Q8IYF1 753 aaPredicted RBP7.91□□□□□ -1.14
CPSF7-224ENST00000544990 UBALD2Q8IYN6 164 aa7.91□□□□□ -1.14
CPSF7-224ENST00000544990 DCP1BQ8IZD4 617 aaKnown RBP7.91□□□□□ -1.14
CPSF7-224ENST00000544990 ENGASEQ8NFI3 743 aa7.91□□□□□ -1.14
CPSF7-224ENST00000544990 OR5B17Q8NGF7 314 aa7.91□□□□□ -1.14
CPSF7-224ENST00000544990 FEZF2Q8TBJ5 459 aa7.91□□□□□ -1.14
CPSF7-224ENST00000544990 SPATA18Q8TC71 538 aa7.91□□□□□ -1.14
CPSF7-224ENST00000544990 C2orf15Q8WU43 125 aaKnown RBP7.91□□□□□ -1.14
CPSF7-224ENST00000544990 SMARCE1Q969G3 411 aa7.91□□□□□ -1.14
CPSF7-224ENST00000544990 NXPE3Q969Y0 559 aa7.91□□□□□ -1.14
CPSF7-224ENST00000544990 HPDLQ96IR7 371 aa7.91□□□□□ -1.14
CPSF7-224ENST00000544990 DMAC2Q9NW81 257 aa7.91□□□□□ -1.14
CPSF7-224ENST00000544990 EPS15L1Q9UBC2 864 aa7.91□□□□□ -1.14
CPSF7-224ENST00000544990 DNMT3BQ9UBC3 853 aaKnown RBP7.91□□□□□ -1.14
CPSF7-224ENST00000544990 HSFX1Q9UBD0 423 aa7.91□□□□□ -1.14
CPSF7-224ENST00000544990 MAPK8IP1Q9UQF2 711 aa7.91□□□□□ -1.14
CPSF7-224ENST00000544990 SNX9Q9Y5X1 595 aa7.91□□□□□ -1.14
CPSF7-224ENST00000544990 TSC2P49815 1807 aa7.91□□□□□ -1.14
CPSF7-224ENST00000544990 DOCK8Q8NF50 2099 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 PTPRJQ12913 1337 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 MTMR11A4FU01 709 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 PRR33A8MZF0 331 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 ZNF197O14709 1029 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 MAPK13O15264 365 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 ASGR2P07307 311 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 RHOP08100 348 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 LAMP2P13473 410 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 NR2F2P24468 414 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 PCSK1P29120 753 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 ATICP31939 592 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 EPHB3P54753 998 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 SIGLEC14Q08ET2 396 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 TWF1Q12792 350 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 DUSP4Q13115 394 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 ADAM9Q13443 819 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 BIRC3Q13489 604 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 NFE2Q16621 373 aaPredicted RBP7.9□□□□□ -1.14
CPSF7-224ENST00000544990 NFIL3Q16649 462 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 SLC39A12Q504Y0 691 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 CYP4A22Q5TCH4 519 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 SH3PXD2AQ5TCZ1 1133 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 ZNF658Q5TYW1 1059 aaPredicted RBP7.9□□□□□ -1.14
CPSF7-224ENST00000544990 CEP135Q66GS9 1140 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 CENPPQ6IPU0 288 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 PDZD4Q76G19 769 aaPredicted RBP7.9□□□□□ -1.14
CPSF7-224ENST00000544990 PDCL2Q8N4E4 241 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 TOP6BLQ8N6T0 577 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 LEMD2Q8NC56 503 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 TTC16Q8NEE8 873 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 CXorf38Q8TB03 319 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 SPPL2BQ8TCT7 592 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 PARD3BQ8TEW8 1205 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 IFT43Q96FT9 208 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 PGLYRP2Q96PD5 576 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 MYADMQ96S97 322 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 MMS19Q96T76 1030 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 TSG101Q99816 390 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 ACBD6Q9BR61 282 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 CORO1BQ9BR76 489 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 LRFN3Q9BTN0 628 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 ZCWPW1Q9H0M4 648 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 KCNK12Q9HB15 430 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 AVENQ9NQS1 362 aaPredicted RBP7.9□□□□□ -1.14
CPSF7-224ENST00000544990 HCFC1R1Q9NWW0 138 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 DDX43Q9NXZ2 648 aaKnown RBP7.9□□□□□ -1.14
CPSF7-224ENST00000544990 ZDHHC3Q9NYG2 299 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 SIX4Q9UIU6 781 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 CDH7Q9ULB5 785 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 L1RE1Q9UN81 338 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 MRPS23Q9Y3D9 190 aaKnown RBP7.9□□□□□ -1.14
CPSF7-224ENST00000544990 ASB3Q9Y575 518 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 PCDHA5Q9Y5H7 936 aa7.9□□□□□ -1.14
CPSF7-224ENST00000544990 BDP1A6H8Y1 2624 aa7.9□□□□□ -1.15
CPSF7-224ENST00000544990 FAM86C2PA6NEL3 165 aa7.89□□□□□ -1.15
CPSF7-224ENST00000544990 FIGNL2A6NMB9 653 aa7.89□□□□□ -1.15
CPSF7-224ENST00000544990 IKBKBO14920 756 aa7.89□□□□□ -1.15
CPSF7-224ENST00000544990 N4BP1O75113 896 aaKnown RBP7.89□□□□□ -1.15
CPSF7-224ENST00000544990 MICAL2O94851 1124 aa7.89□□□□□ -1.15
CPSF7-224ENST00000544990 CLSTN1O94985 981 aa7.89□□□□□ -1.15
CPSF7-224ENST00000544990 CST3P01034 146 aaPredicted RBP7.89□□□□□ -1.15
CPSF7-224ENST00000544990 FAM163BP0C2L3 166 aa7.89□□□□□ -1.15
CPSF7-224ENST00000544990 KRT13P13646 458 aa7.89□□□□□ -1.15
CPSF7-224ENST00000544990 PCSK2P16519 638 aa7.89□□□□□ -1.15
CPSF7-224ENST00000544990 PSMC2P35998 433 aaKnown RBP7.89□□□□□ -1.15
CPSF7-224ENST00000544990 PPP1R2P41236 205 aa7.89□□□□□ -1.15
CPSF7-224ENST00000544990 CASP4P49662 377 aa7.89□□□□□ -1.15
CPSF7-224ENST00000544990 SMCPP49901 116 aaPredicted RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms