RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 SPATA18Q8TC71 538 aa17.4■□□□□ 0.38
DDX55-212ENST00000544738 ZNF507Q8TCN5 953 aa17.4■□□□□ 0.38
DDX55-212ENST00000544738 DUSP15Q9H1R2 295 aaPredicted RBP17.4■□□□□ 0.38
DDX55-212ENST00000544738 GDAP2Q9NXN4 497 aa17.4■□□□□ 0.38
DDX55-212ENST00000544738 PCDHA7Q9UN72 937 aa17.4■□□□□ 0.38
DDX55-212ENST00000544738 PCDHB5Q9Y5E4 795 aa17.4■□□□□ 0.38
DDX55-212ENST00000544738 TSC2P49815 1807 aa17.4■□□□□ 0.38
DDX55-212ENST00000544738 TCHHQ07283 1943 aa17.39■□□□□ 0.37
DDX55-212ENST00000544738 PVALEFA0A1B0GWK0 134 aa17.39■□□□□ 0.37
DDX55-212ENST00000544738 DCLK1O15075 740 aa17.39■□□□□ 0.37
DDX55-212ENST00000544738 ATG13O75143 517 aa17.39■□□□□ 0.37
DDX55-212ENST00000544738 SOAT2O75908 522 aa17.39■□□□□ 0.37
DDX55-212ENST00000544738 AKAP3O75969 853 aa17.39■□□□□ 0.37
DDX55-212ENST00000544738 RHOBTB1O94844 696 aa17.39■□□□□ 0.37
DDX55-212ENST00000544738 TNNC2P02585 160 aa17.39■□□□□ 0.37
DDX55-212ENST00000544738 KRT19P08727 400 aa17.39■□□□□ 0.37
DDX55-212ENST00000544738 HAPLN1P10915 354 aaPredicted RBP17.39■□□□□ 0.37
DDX55-212ENST00000544738 CEACAM1P13688 526 aa17.39■□□□□ 0.37
DDX55-212ENST00000544738 CDC25CP30307 473 aa17.39■□□□□ 0.37
DDX55-212ENST00000544738 BFSP1Q12934 665 aa17.39■□□□□ 0.37
DDX55-212ENST00000544738 MYO1EQ12965 1108 aa17.39■□□□□ 0.37
DDX55-212ENST00000544738 ELF2Q15723 593 aa17.39■□□□□ 0.37
DDX55-212ENST00000544738 ARHGAP29Q52LW3 1261 aa17.39■□□□□ 0.37
DDX55-212ENST00000544738 STXBP5Q5T5C0 1151 aa17.39■□□□□ 0.37
DDX55-212ENST00000544738 GAREM2Q75VX8 874 aa17.39■□□□□ 0.37
DDX55-212ENST00000544738 EPM2AIP1Q7L775 607 aaPredicted RBP17.39■□□□□ 0.37
DDX55-212ENST00000544738 PDCL2Q8N4E4 241 aa17.39■□□□□ 0.37
DDX55-212ENST00000544738 GLIS3Q8NEA6 775 aa17.39■□□□□ 0.37
DDX55-212ENST00000544738 CXorf38Q8TB03 319 aa17.39■□□□□ 0.37
DDX55-212ENST00000544738 HPS3Q969F9 1004 aa17.39■□□□□ 0.37
DDX55-212ENST00000544738 ACBD6Q9BR61 282 aa17.39■□□□□ 0.37
DDX55-212ENST00000544738 ATXN3LQ9H3M9 355 aa17.39■□□□□ 0.37
DDX55-212ENST00000544738 INTS13Q9NVM9 706 aa17.39■□□□□ 0.37
DDX55-212ENST00000544738 HSPBP1Q9NZL4 362 aa17.39■□□□□ 0.37
DDX55-212ENST00000544738 ZMYM5Q9UJ78 669 aa17.39■□□□□ 0.37
DDX55-212ENST00000544738 L1RE1Q9UN81 338 aa17.39■□□□□ 0.37
DDX55-212ENST00000544738 ATF6P18850 670 aa17.38■□□□□ 0.37
DDX55-212ENST00000544738 GABRR2P28476 465 aa17.38■□□□□ 0.37
DDX55-212ENST00000544738 HOXD13P35453 343 aa17.38■□□□□ 0.37
DDX55-212ENST00000544738 LHX1P48742 406 aa17.38■□□□□ 0.37
DDX55-212ENST00000544738 MYL7Q01449 175 aa17.38■□□□□ 0.37
DDX55-212ENST00000544738 DUOXA2Q1HG44 320 aa17.38■□□□□ 0.37
DDX55-212ENST00000544738 UAP1L1Q3KQV9 507 aa17.38■□□□□ 0.37
DDX55-212ENST00000544738 RESP18Q5W5W9 173 aa17.38■□□□□ 0.37
DDX55-212ENST00000544738 DPH6Q7L8W6 267 aa17.38■□□□□ 0.37
DDX55-212ENST00000544738 TOP6BLQ8N6T0 577 aa17.38■□□□□ 0.37
DDX55-212ENST00000544738 GCNAQ96QF7 691 aa17.38■□□□□ 0.37
DDX55-212ENST00000544738 MTMR12Q9C0I1 747 aa17.38■□□□□ 0.37
DDX55-212ENST00000544738 OBP2AQ9NY56 170 aa17.38■□□□□ 0.37
DDX55-212ENST00000544738 ABI2Q9NYB9 513 aaPredicted RBP17.38■□□□□ 0.37
DDX55-212ENST00000544738 RCOR1Q9UKL0 485 aa17.38■□□□□ 0.37
DDX55-212ENST00000544738 SNX9Q9Y5X1 595 aa17.38■□□□□ 0.37
DDX55-212ENST00000544738 UBE4BO95155 1302 aa17.38■□□□□ 0.37
DDX55-212ENST00000544738 ATG2BQ96BY7 2078 aa17.38■□□□□ 0.37
DDX55-212ENST00000544738 ITPR1Q14643 2758 aa17.38■□□□□ 0.37
DDX55-212ENST00000544738 LNP1A1A4G5 178 aa17.37■□□□□ 0.37
DDX55-212ENST00000544738 BCLAF3A2AJT9 711 aaKnown RBP17.37■□□□□ 0.37
DDX55-212ENST00000544738 TAF4O00268 1085 aa17.37■□□□□ 0.37
DDX55-212ENST00000544738 PCSK1P29120 753 aa17.37■□□□□ 0.37
DDX55-212ENST00000544738 WEE1P30291 646 aa17.37■□□□□ 0.37
DDX55-212ENST00000544738 EHHADHQ08426 723 aa17.37■□□□□ 0.37
DDX55-212ENST00000544738 GRSF1Q12849 480 aaKnown RBP eCLIP17.37■□□□□ 0.37
DDX55-212ENST00000544738 ITPRIPL2Q3MIP1 535 aa17.37■□□□□ 0.37
DDX55-212ENST00000544738 GPR158Q5T848 1215 aa17.37■□□□□ 0.37
DDX55-212ENST00000544738 HS2ST1Q7LGA3 356 aa17.37■□□□□ 0.37
DDX55-212ENST00000544738 CBWD2Q8IUF1 395 aa17.37■□□□□ 0.37
DDX55-212ENST00000544738 WDR49Q8IV35 697 aa17.37■□□□□ 0.37
DDX55-212ENST00000544738 CEP57L1Q8IYX8 460 aa17.37■□□□□ 0.37
DDX55-212ENST00000544738 SPRYD3Q8NCJ5 442 aa17.37■□□□□ 0.37
DDX55-212ENST00000544738 LEO1Q8WVC0 666 aaPredicted RBP17.37■□□□□ 0.37
DDX55-212ENST00000544738 HHIPQ96QV1 700 aa17.37■□□□□ 0.37
DDX55-212ENST00000544738 LPIN3Q9BQK8 851 aa17.37■□□□□ 0.37
DDX55-212ENST00000544738 TASP1Q9H6P5 420 aa17.37■□□□□ 0.37
DDX55-212ENST00000544738 ABCB6Q9NP58 842 aa17.37■□□□□ 0.37
DDX55-212ENST00000544738 TMEM9BQ9NQ34 198 aa17.37■□□□□ 0.37
DDX55-212ENST00000544738 DDX43Q9NXZ2 648 aaKnown RBP17.37■□□□□ 0.37
DDX55-212ENST00000544738 CGNQ9P2M7 1197 aaKnown RBP17.37■□□□□ 0.37
DDX55-212ENST00000544738 SIX4Q9UIU6 781 aa17.37■□□□□ 0.37
DDX55-212ENST00000544738 LAMA5O15230 3695 aa17.37■□□□□ 0.37
DDX55-212ENST00000544738 KHNYNO15037 678 aaKnown RBP17.36■□□□□ 0.37
DDX55-212ENST00000544738 HYAL3O43820 417 aaPredicted RBP17.36■□□□□ 0.37
DDX55-212ENST00000544738 CSRP1P21291 193 aaKnown RBP17.36■□□□□ 0.37
DDX55-212ENST00000544738 GBP1P32455 592 aa17.36■□□□□ 0.37
DDX55-212ENST00000544738 RPL10AP62906 217 aaKnown RBP17.36■□□□□ 0.37
DDX55-212ENST00000544738 DNM1Q05193 864 aaKnown RBP17.36■□□□□ 0.37
DDX55-212ENST00000544738 PKP1Q13835 747 aa17.36■□□□□ 0.37
DDX55-212ENST00000544738 SNRNP35Q16560 246 aaKnown RBP17.36■□□□□ 0.37
DDX55-212ENST00000544738 INTS6LQ5JSJ4 861 aaKnown RBP17.36■□□□□ 0.37
DDX55-212ENST00000544738 CAMKK1Q8N5S9 505 aa17.36■□□□□ 0.37
DDX55-212ENST00000544738 DEFB124Q8NES8 71 aa17.36■□□□□ 0.37
DDX55-212ENST00000544738 GIPC2Q8TF65 315 aa17.36■□□□□ 0.37
DDX55-212ENST00000544738 HPDLQ96IR7 371 aa17.36■□□□□ 0.37
DDX55-212ENST00000544738 AGPAT3Q9NRZ7 376 aa17.36■□□□□ 0.37
DDX55-212ENST00000544738 INVSQ9Y283 1065 aa17.36■□□□□ 0.37
DDX55-212ENST00000544738 FREM2Q5SZK8 3169 aa17.36■□□□□ 0.37
DDX55-212ENST00000544738 LOC400499M0QZD8 3231 aa17.36■□□□□ 0.37
DDX55-212ENST00000544738 GABRDO14764 452 aa17.35■□□□□ 0.37
DDX55-212ENST00000544738 TGFB1I1O43294 461 aa17.35■□□□□ 0.37
DDX55-212ENST00000544738 PRPF40AO75400 957 aaKnown RBP17.35■□□□□ 0.37
DDX55-212ENST00000544738 SLFN14P0C7P3 912 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms