RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 ROPN1BQ9BZX4 212 aaPredicted RBP13.32□□□□□ -0.28
CHD4-211ENST00000544484 TUT1Q9H6E5 874 aaKnown RBP13.32□□□□□ -0.28
CHD4-211ENST00000544484 ROPN1Q9HAT0 212 aaPredicted RBP13.32□□□□□ -0.28
CHD4-211ENST00000544484 TIMM13Q9Y5L4 95 aaPredicted RBP13.32□□□□□ -0.28
CHD4-211ENST00000544484 GPR182O15218 404 aa13.31□□□□□ -0.28
CHD4-211ENST00000544484 TFRCP02786 760 aaKnown RBP13.31□□□□□ -0.28
CHD4-211ENST00000544484 AVPR1AP37288 418 aa13.31□□□□□ -0.28
CHD4-211ENST00000544484 OVGP1Q12889 678 aa13.31□□□□□ -0.28
CHD4-211ENST00000544484 CYTH1Q15438 398 aa13.31□□□□□ -0.28
CHD4-211ENST00000544484 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.31□□□□□ -0.28
CHD4-211ENST00000544484 TEKT4Q8WW24 435 aa13.31□□□□□ -0.28
CHD4-211ENST00000544484 FAM136AQ96C01 138 aa13.31□□□□□ -0.28
CHD4-211ENST00000544484 IL17RAQ96F46 866 aa13.31□□□□□ -0.28
CHD4-211ENST00000544484 FOPNLQ96NB1 174 aa13.31□□□□□ -0.28
CHD4-211ENST00000544484 AGXT2Q9BYV1 514 aa13.31□□□□□ -0.28
CHD4-211ENST00000544484 GBA2Q9HCG7 927 aaPredicted RBP13.31□□□□□ -0.28
CHD4-211ENST00000544484 GRID1Q9ULK0 1009 aa13.31□□□□□ -0.28
CHD4-211ENST00000544484 SUFUQ9UMX1 484 aa13.31□□□□□ -0.28
CHD4-211ENST00000544484 PCDHB8Q9UN66 801 aa13.31□□□□□ -0.28
CHD4-211ENST00000544484 SPAG6O75602 509 aa13.31□□□□□ -0.28
CHD4-211ENST00000544484 PPP3CCP48454 512 aa13.31□□□□□ -0.28
CHD4-211ENST00000544484 GEMIN4P57678 1058 aaKnown RBP13.31□□□□□ -0.28
CHD4-211ENST00000544484 LRRC74AQ0VAA2 488 aa13.31□□□□□ -0.28
CHD4-211ENST00000544484 MTFR1LQ9H019 292 aa13.31□□□□□ -0.28
CHD4-211ENST00000544484 SFMBT1Q9UHJ3 866 aa13.31□□□□□ -0.28
CHD4-211ENST00000544484 PSTPIP1O43586 416 aa13.31□□□□□ -0.28
CHD4-211ENST00000544484 CYP2C8P10632 490 aa13.31□□□□□ -0.28
CHD4-211ENST00000544484 INSRRP14616 1297 aa13.31□□□□□ -0.28
CHD4-211ENST00000544484 TGM2P21980 687 aa13.31□□□□□ -0.28
CHD4-211ENST00000544484 FNTAP49354 379 aa13.31□□□□□ -0.28
CHD4-211ENST00000544484 IRAK1P51617 712 aa13.31□□□□□ -0.28
CHD4-211ENST00000544484 CDH18Q13634 790 aa13.31□□□□□ -0.28
CHD4-211ENST00000544484 RARS2Q5T160 578 aaKnown RBP13.31□□□□□ -0.28
CHD4-211ENST00000544484 CDKAL1Q5VV42 579 aa13.31□□□□□ -0.28
CHD4-211ENST00000544484 CALML6Q8TD86 181 aa13.31□□□□□ -0.28
CHD4-211ENST00000544484 E2F7Q96AV8 911 aa13.31□□□□□ -0.28
CHD4-211ENST00000544484 TMEM121Q9BTD3 319 aa13.31□□□□□ -0.28
CHD4-211ENST00000544484 AGLP35573 1532 aa13.31□□□□□ -0.28
CHD4-211ENST00000544484 ADGRB1O14514 1584 aa13.31□□□□□ -0.28
CHD4-211ENST00000544484 CASTOR2A6NHX0 329 aa13.31□□□□□ -0.28
CHD4-211ENST00000544484 RHOBTB1O94844 696 aa13.31□□□□□ -0.28
CHD4-211ENST00000544484 METTL7BQ6UX53 244 aa13.31□□□□□ -0.28
CHD4-211ENST00000544484 FAM111AQ96PZ2 611 aa13.31□□□□□ -0.28
CHD4-211ENST00000544484 SLC7A5P2Q9GIP4 190 aa13.31□□□□□ -0.28
CHD4-211ENST00000544484 TRADDQ15628 312 aa13.31□□□□□ -0.28
CHD4-211ENST00000544484 RNF168Q8IYW5 571 aaPredicted RBP13.31□□□□□ -0.28
CHD4-211ENST00000544484 PNMA5Q96PV4 448 aa13.31□□□□□ -0.28
CHD4-211ENST00000544484 MRPL1Q9BYD6 325 aaKnown RBP13.31□□□□□ -0.28
CHD4-211ENST00000544484 MANSC1Q9H8J5 431 aa13.31□□□□□ -0.28
CHD4-211ENST00000544484 STIP1P31948 543 aaKnown RBP13.3□□□□□ -0.28
CHD4-211ENST00000544484 RARRES1P49788 294 aa13.3□□□□□ -0.28
CHD4-211ENST00000544484 TGFB2P61812 414 aa13.3□□□□□ -0.28
CHD4-211ENST00000544484 PPP2R3CQ969Q6 453 aa13.3□□□□□ -0.28
CHD4-211ENST00000544484 CINPQ9BW66 212 aaPredicted RBP13.3□□□□□ -0.28
CHD4-211ENST00000544484 CLCA2Q9UQC9 943 aa13.3□□□□□ -0.28
CHD4-211ENST00000544484 A0A087X0B3 334 aa13.3□□□□□ -0.28
CHD4-211ENST00000544484 SPDYE5A6NIY4 337 aa13.3□□□□□ -0.28
CHD4-211ENST00000544484 MAPRE1Q15691 268 aaKnown RBP13.3□□□□□ -0.28
CHD4-211ENST00000544484 SPDYE7PQ495Y7 208 aa13.3□□□□□ -0.28
CHD4-211ENST00000544484 TFDP3Q5H9I0 405 aa13.3□□□□□ -0.28
CHD4-211ENST00000544484 TRPM8Q7Z2W7 1104 aa13.3□□□□□ -0.28
CHD4-211ENST00000544484 SNX31Q8N9S9 440 aa13.3□□□□□ -0.28
CHD4-211ENST00000544484 FBXO32Q969P5 355 aa13.3□□□□□ -0.28
CHD4-211ENST00000544484 MTBPQ96DY7 904 aa13.3□□□□□ -0.28
CHD4-211ENST00000544484 KCTD10Q9H3F6 313 aa13.3□□□□□ -0.28
CHD4-211ENST00000544484 B2RBV5 119 aa13.3□□□□□ -0.28
CHD4-211ENST00000544484 VWA5AO00534 786 aa13.3□□□□□ -0.28
CHD4-211ENST00000544484 SLITRK3O94933 977 aa13.3□□□□□ -0.28
CHD4-211ENST00000544484 PYGLP06737 847 aa13.3□□□□□ -0.28
CHD4-211ENST00000544484 PTPN7P35236 360 aa13.3□□□□□ -0.28
CHD4-211ENST00000544484 ARID3BQ8IVW6 561 aaPredicted RBP13.3□□□□□ -0.28
CHD4-211ENST00000544484 RAB42Q8N4Z0 105 aa13.3□□□□□ -0.28
CHD4-211ENST00000544484 FBXO36Q8NEA4 188 aa13.3□□□□□ -0.28
CHD4-211ENST00000544484 KAT2BQ92831 832 aa13.3□□□□□ -0.28
CHD4-211ENST00000544484 SNTG2Q9NY99 539 aa13.3□□□□□ -0.28
CHD4-211ENST00000544484 LRRIQ1Q96JM4 1722 aa13.3□□□□□ -0.28
CHD4-211ENST00000544484 DSG3P32926 999 aa13.3□□□□□ -0.28
CHD4-211ENST00000544484 GCLCP48506 637 aaPredicted RBP13.3□□□□□ -0.28
CHD4-211ENST00000544484 RBM43Q6ZSC3 357 aaKnown RBP13.3□□□□□ -0.28
CHD4-211ENST00000544484 ATP6V0D2Q8N8Y2 350 aa13.3□□□□□ -0.28
CHD4-211ENST00000544484 COLEC11Q9BWP8 271 aa13.3□□□□□ -0.28
CHD4-211ENST00000544484 SYNDIG1Q9H7V2 258 aa13.3□□□□□ -0.28
CHD4-211ENST00000544484 ARHGAP10A1A4S6 786 aa13.3□□□□□ -0.28
CHD4-211ENST00000544484 MTSS1O43312 755 aa13.3□□□□□ -0.28
CHD4-211ENST00000544484 LRG1P02750 347 aa13.3□□□□□ -0.28
CHD4-211ENST00000544484 CNTN2Q02246 1040 aa13.3□□□□□ -0.28
CHD4-211ENST00000544484 APOBEC3HQ6NTF7 200 aaKnown RBP13.3□□□□□ -0.28
CHD4-211ENST00000544484 TMC2Q8TDI7 906 aa13.3□□□□□ -0.28
CHD4-211ENST00000544484 FUCA2Q9BTY2 467 aa13.3□□□□□ -0.28
CHD4-211ENST00000544484 THP07101 528 aa13.29□□□□□ -0.28
CHD4-211ENST00000544484 FAM83AQ86UY5 434 aa13.29□□□□□ -0.28
CHD4-211ENST00000544484 PRR23AA6NEV1 266 aa13.29□□□□□ -0.28
CHD4-211ENST00000544484 STX7O15400 261 aaKnown RBP13.29□□□□□ -0.28
CHD4-211ENST00000544484 AKAP5P24588 427 aa13.29□□□□□ -0.28
CHD4-211ENST00000544484 ABCE1P61221 599 aaKnown RBP13.29□□□□□ -0.28
CHD4-211ENST00000544484 RXFP2Q8WXD0 754 aa13.29□□□□□ -0.28
CHD4-211ENST00000544484 NR1H4Q96RI1 486 aaPredicted RBP13.29□□□□□ -0.28
CHD4-211ENST00000544484 DMGDHQ9UI17 866 aaKnown RBP13.29□□□□□ -0.28
CHD4-211ENST00000544484 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.29□□□□□ -0.28
CHD4-211ENST00000544484 ADM5C9JUS6 153 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms