RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 AKAP5P24588 427 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 CASP1P29466 404 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 MAGEA4P43358 317 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 ACADSBP45954 432 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 ATAD3BQ5T9A4 648 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 AGAP9Q5VTM2 703 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 C3orf62Q6ZUJ4 267 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 TMEM260Q9NX78 707 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 CRB1P82279 1406 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 CCT8L1PA6NM43 557 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 TPST1O60507 370 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 CNPP09543 421 aaKnown RBP10.78□□□□□ -0.68
PCDH9-204ENST00000544246 GPR1P46091 355 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 HARS2P49590 506 aaKnown RBP10.78□□□□□ -0.68
PCDH9-204ENST00000544246 ARHGAP15Q53QZ3 475 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 TTLL6Q8N841 843 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 TIPINQ9BVW5 301 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 REXO4Q9GZR2 422 aaKnown RBP10.78□□□□□ -0.68
PCDH9-204ENST00000544246 TMEM117Q9H0C3 514 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 MTIF3Q9H2K0 278 aaKnown RBP10.78□□□□□ -0.68
PCDH9-204ENST00000544246 PIH1D3Q9NQM4 214 aaKnown RBP10.78□□□□□ -0.68
PCDH9-204ENST00000544246 NCOA3Q9Y6Q9 1424 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 TTC26A0AVF1 554 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 USP17L15C9J2P7 530 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 USP17L13C9JLJ4 530 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 USP17L11C9JVI0 530 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 USP17L18D6R9N7 530 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 USP17L22D6RA61 530 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 USP17L17D6RBQ6 530 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 USP17L19D6RCP7 530 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 USP17L20D6RJB6 530 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 ERVK-10P10266 1014 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 THRAP10827 490 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 VCLP18206 1134 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 USP17L24Q0WX57 530 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 GRAPQ13588 217 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 KCNV1Q6PIU1 500 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 USP17L6PQ6QN14 398 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 PEG10Q86TG7 708 aaKnown RBP10.78□□□□□ -0.68
PCDH9-204ENST00000544246 UNC45BQ8IWX7 931 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 DCP1BQ8IZD4 617 aaKnown RBP10.78□□□□□ -0.68
PCDH9-204ENST00000544246 GRAPLQ8TC17 118 aaPredicted RBP10.78□□□□□ -0.68
PCDH9-204ENST00000544246 ENKURQ8TC29 256 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 ZNF512Q96ME7 567 aaPredicted RBP10.78□□□□□ -0.68
PCDH9-204ENST00000544246 OSBPL5Q9H0X9 879 aaPredicted RBP10.78□□□□□ -0.68
PCDH9-204ENST00000544246 TUFT1Q9NNX1 390 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 SLC40A1Q9NP59 571 aa10.78□□□□□ -0.68
PCDH9-204ENST00000544246 INO80Q9ULG1 1556 aaPredicted RBP10.77□□□□□ -0.68
PCDH9-204ENST00000544246 ALKQ9UM73 1620 aa10.77□□□□□ -0.68
PCDH9-204ENST00000544246 TMEM120BA0PK00 339 aa10.77□□□□□ -0.68
PCDH9-204ENST00000544246 IQCA1LA6NCM1 817 aa10.77□□□□□ -0.68
PCDH9-204ENST00000544246 USP17L10C9JJH3 530 aa10.77□□□□□ -0.68
PCDH9-204ENST00000544246 SMNDC1O75940 238 aaKnown RBP eCLIP10.77□□□□□ -0.68
PCDH9-204ENST00000544246 CCDC130P13994 396 aa10.77□□□□□ -0.68
PCDH9-204ENST00000544246 TFE3P19532 575 aaPredicted RBP10.77□□□□□ -0.68
PCDH9-204ENST00000544246 CRKP46108 304 aa10.77□□□□□ -0.68
PCDH9-204ENST00000544246 GEMIN4P57678 1058 aaKnown RBP10.77□□□□□ -0.68
PCDH9-204ENST00000544246 SFSWAPQ12872 951 aaKnown RBP10.77□□□□□ -0.68
PCDH9-204ENST00000544246 TMEM132DQ14C87 1099 aa10.77□□□□□ -0.68
PCDH9-204ENST00000544246 SUGP1Q8IWZ8 645 aaKnown RBP10.77□□□□□ -0.68
PCDH9-204ENST00000544246 OR6J1Q8NGC5 347 aa10.77□□□□□ -0.68
PCDH9-204ENST00000544246 MS4A14Q96JA4 679 aa10.77□□□□□ -0.68
PCDH9-204ENST00000544246 ILKAPQ9H0C8 392 aaPredicted RBP10.77□□□□□ -0.68
PCDH9-204ENST00000544246 ACAD9Q9H845 621 aa10.77□□□□□ -0.68
PCDH9-204ENST00000544246 KLHL1Q9NR64 748 aa10.77□□□□□ -0.68
PCDH9-204ENST00000544246 VAV3Q9UKW4 847 aa10.77□□□□□ -0.68
PCDH9-204ENST00000544246 PCDHGA4Q9Y5G9 962 aa10.77□□□□□ -0.68
PCDH9-204ENST00000544246 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.77□□□□□ -0.69
PCDH9-204ENST00000544246 FAM220BPB1ANY3 271 aa10.77□□□□□ -0.69
PCDH9-204ENST00000544246 ZNF682O95780 498 aa10.77□□□□□ -0.69
PCDH9-204ENST00000544246 SERPINB5P36952 375 aa10.77□□□□□ -0.69
PCDH9-204ENST00000544246 SEMA3FQ13275 785 aa10.77□□□□□ -0.69
PCDH9-204ENST00000544246 LMBRD2Q68DH5 695 aaPredicted RBP10.77□□□□□ -0.69
PCDH9-204ENST00000544246 PNKPQ96T60 521 aa10.77□□□□□ -0.69
PCDH9-204ENST00000544246 ZCCHC17Q9NP64 241 aaKnown RBP10.77□□□□□ -0.69
PCDH9-204ENST00000544246 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.77□□□□□ -0.69
PCDH9-204ENST00000544246 RNF181Q9P0P0 153 aa10.77□□□□□ -0.69
PCDH9-204ENST00000544246 PADI4Q9UM07 663 aa10.77□□□□□ -0.69
PCDH9-204ENST00000544246 SPATA31A1Q5TZJ5 1347 aa10.77□□□□□ -0.69
PCDH9-204ENST00000544246 KPNA4O00629 521 aaPredicted RBP10.77□□□□□ -0.69
PCDH9-204ENST00000544246 TBC1D12O60347 775 aa10.77□□□□□ -0.69
PCDH9-204ENST00000544246 ECDO95905 644 aaPredicted RBP10.77□□□□□ -0.69
PCDH9-204ENST00000544246 AVPR1AP37288 418 aa10.77□□□□□ -0.69
PCDH9-204ENST00000544246 CENPCQ03188 943 aa10.77□□□□□ -0.69
PCDH9-204ENST00000544246 NFYCQ13952 458 aa10.77□□□□□ -0.69
PCDH9-204ENST00000544246 CLEC16AQ2KHT3 1053 aa10.77□□□□□ -0.69
PCDH9-204ENST00000544246 MAGEB10Q96LZ2 347 aaPredicted RBP10.77□□□□□ -0.69
PCDH9-204ENST00000544246 NMRK2Q9NPI5 230 aa10.77□□□□□ -0.69
PCDH9-204ENST00000544246 SNX12Q9UMY4 172 aa10.77□□□□□ -0.69
PCDH9-204ENST00000544246 SNX13Q9Y5W8 968 aa10.77□□□□□ -0.69
PCDH9-204ENST00000544246 AKR1B1P15121 316 aa10.77□□□□□ -0.69
PCDH9-204ENST00000544246 TGM3Q08188 693 aa10.77□□□□□ -0.69
PCDH9-204ENST00000544246 OASLQ15646 514 aaKnown RBP10.77□□□□□ -0.69
PCDH9-204ENST00000544246 DDR2Q16832 855 aa10.77□□□□□ -0.69
PCDH9-204ENST00000544246 WDR72Q3MJ13 1102 aa10.77□□□□□ -0.69
PCDH9-204ENST00000544246 KLHL12Q53G59 568 aa10.77□□□□□ -0.69
PCDH9-204ENST00000544246 PMF1Q6P1K2 205 aa10.77□□□□□ -0.69
PCDH9-204ENST00000544246 NT5DC4Q86YG4 428 aa10.77□□□□□ -0.69
PCDH9-204ENST00000544246 GUF1Q8N442 669 aaKnown RBP10.77□□□□□ -0.69
PCDH9-204ENST00000544246 SEPT1Q8WYJ6 367 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms