RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 KLC3Q6P597 504 aa13.49□□□□□ -0.25
TUBGCP2-210ENST00000543663 ABI1Q8IZP0 508 aa13.49□□□□□ -0.25
TUBGCP2-210ENST00000543663 RIT2Q99578 217 aa13.49□□□□□ -0.25
TUBGCP2-210ENST00000543663 GDF3Q9NR23 364 aa13.49□□□□□ -0.25
TUBGCP2-210ENST00000543663 UBP1Q9NZI7 540 aa13.49□□□□□ -0.25
TUBGCP2-210ENST00000543663 COL16A1Q07092 1604 aaPredicted RBP13.49□□□□□ -0.25
TUBGCP2-210ENST00000543663 CLCN3P51790 818 aa13.48□□□□□ -0.25
TUBGCP2-210ENST00000543663 AQP5P55064 265 aa13.48□□□□□ -0.25
TUBGCP2-210ENST00000543663 FKBP1AP62942 108 aaKnown RBP13.48□□□□□ -0.25
TUBGCP2-210ENST00000543663 MFSD7Q6UXD7 560 aa13.48□□□□□ -0.25
TUBGCP2-210ENST00000543663 BZW1Q7L1Q6 419 aaKnown RBP13.48□□□□□ -0.25
TUBGCP2-210ENST00000543663 TRAPPC12Q8WVT3 735 aa13.48□□□□□ -0.25
TUBGCP2-210ENST00000543663 ALG3Q92685 438 aa13.48□□□□□ -0.25
TUBGCP2-210ENST00000543663 PDCD2LQ9BRP1 358 aa13.48□□□□□ -0.25
TUBGCP2-210ENST00000543663 MRIQ9BWK5 157 aa13.48□□□□□ -0.25
TUBGCP2-210ENST00000543663 MOV10L1Q9BXT6 1211 aaKnown RBP13.48□□□□□ -0.25
TUBGCP2-210ENST00000543663 DNPEPQ9ULA0 475 aa13.48□□□□□ -0.25
TUBGCP2-210ENST00000543663 RIPK3Q9Y572 518 aa13.48□□□□□ -0.25
TUBGCP2-210ENST00000543663 LAMA4Q16363 1823 aa13.48□□□□□ -0.25
TUBGCP2-210ENST00000543663 NPTXRO95502 500 aa13.48□□□□□ -0.25
TUBGCP2-210ENST00000543663 RARRES1P49788 294 aa13.48□□□□□ -0.25
TUBGCP2-210ENST00000543663 NME5P56597 212 aa13.48□□□□□ -0.25
TUBGCP2-210ENST00000543663 PIGHQ14442 188 aaPredicted RBP13.48□□□□□ -0.25
TUBGCP2-210ENST00000543663 EFTUD2Q15029 972 aaKnown RBP eCLIP13.48□□□□□ -0.251e-6■■□□□ 13.4
TUBGCP2-210ENST00000543663 CES3Q6UWW8 571 aa13.48□□□□□ -0.25
TUBGCP2-210ENST00000543663 KCTD17Q8N5Z5 321 aa13.48□□□□□ -0.25
TUBGCP2-210ENST00000543663 NAF1Q96HR8 494 aaKnown RBP13.48□□□□□ -0.25
TUBGCP2-210ENST00000543663 KCNMB3Q9NPA1 279 aa13.48□□□□□ -0.25
TUBGCP2-210ENST00000543663 HACD3Q9P035 362 aa13.48□□□□□ -0.25
TUBGCP2-210ENST00000543663 ADRA1DP25100 572 aa13.48□□□□□ -0.25
TUBGCP2-210ENST00000543663 EFHC2Q5JST6 749 aa13.48□□□□□ -0.25
TUBGCP2-210ENST00000543663 AGAP11Q8TF27 550 aa13.48□□□□□ -0.25
TUBGCP2-210ENST00000543663 SUN2Q9UH99 717 aa13.48□□□□□ -0.25
TUBGCP2-210ENST00000543663 TLR2O60603 784 aa13.48□□□□□ -0.25
TUBGCP2-210ENST00000543663 ANXA13P27216 316 aa13.48□□□□□ -0.25
TUBGCP2-210ENST00000543663 SERPINB5P36952 375 aa13.48□□□□□ -0.25
TUBGCP2-210ENST00000543663 RPL10AP62906 217 aaKnown RBP13.48□□□□□ -0.25
TUBGCP2-210ENST00000543663 ITGB3BPQ13352 177 aaPredicted RBP13.48□□□□□ -0.25
TUBGCP2-210ENST00000543663 PDCD2Q16342 344 aaPredicted RBP13.48□□□□□ -0.25
TUBGCP2-210ENST00000543663 SGSM1Q2NKQ1 1148 aa13.48□□□□□ -0.25
TUBGCP2-210ENST00000543663 TCP10LQ8TDR4 215 aa13.48□□□□□ -0.25
TUBGCP2-210ENST00000543663 P2RX7Q99572 595 aaKnown RBP13.48□□□□□ -0.25
TUBGCP2-210ENST00000543663 RHBDL2Q9NX52 303 aa13.48□□□□□ -0.25
TUBGCP2-210ENST00000543663 HMBSP08397 361 aa13.47□□□□□ -0.25
TUBGCP2-210ENST00000543663 AVPR1AP37288 418 aa13.47□□□□□ -0.25
TUBGCP2-210ENST00000543663 AP5M1Q9H0R1 490 aa13.47□□□□□ -0.25
TUBGCP2-210ENST00000543663 PTPRHQ9HD43 1115 aa13.47□□□□□ -0.25
TUBGCP2-210ENST00000543663 PCDHGC5Q9Y5F6 944 aa13.47□□□□□ -0.25
TUBGCP2-210ENST00000543663 E9PBE3 544 aa13.47□□□□□ -0.25
TUBGCP2-210ENST00000543663 KLHL41O60662 606 aa13.47□□□□□ -0.25
TUBGCP2-210ENST00000543663 CTSHP09668 335 aa13.47□□□□□ -0.25
TUBGCP2-210ENST00000543663 HSPA8P11142 646 aaKnown RBP13.47□□□□□ -0.25
TUBGCP2-210ENST00000543663 METTL23Q86XA0 190 aa13.47□□□□□ -0.25
TUBGCP2-210ENST00000543663 FAM131BQ86XD5 332 aa13.47□□□□□ -0.25
TUBGCP2-210ENST00000543663 EXOC8Q8IYI6 725 aa13.47□□□□□ -0.25
TUBGCP2-210ENST00000543663 NETO2Q8NC67 525 aa13.47□□□□□ -0.25
TUBGCP2-210ENST00000543663 ETNPPLQ8TBG4 499 aa13.47□□□□□ -0.25
TUBGCP2-210ENST00000543663 AFF4Q9UHB7 1163 aaKnown RBP13.47□□□□□ -0.25
TUBGCP2-210ENST00000543663 NR2E1Q9Y466 385 aa13.47□□□□□ -0.25
TUBGCP2-210ENST00000543663 F8VP50 259 aa13.47□□□□□ -0.25
TUBGCP2-210ENST00000543663 AKAP10O43572 662 aa13.47□□□□□ -0.25
TUBGCP2-210ENST00000543663 GNL1P36915 607 aaPredicted RBP13.47□□□□□ -0.25
TUBGCP2-210ENST00000543663 CCNA1P78396 465 aa13.47□□□□□ -0.25
TUBGCP2-210ENST00000543663 C6orf10Q5SRN2 563 aa13.47□□□□□ -0.25
TUBGCP2-210ENST00000543663 ACOT1Q86TX2 421 aa13.47□□□□□ -0.25
TUBGCP2-210ENST00000543663 CDKL3Q8IVW4 592 aaPredicted RBP13.47□□□□□ -0.25
TUBGCP2-210ENST00000543663 PPIL6Q8IXY8 311 aa13.47□□□□□ -0.25
TUBGCP2-210ENST00000543663 PABPC5Q96DU9 382 aaKnown RBP13.47□□□□□ -0.25
TUBGCP2-210ENST00000543663 NIF3L1Q9GZT8 377 aa13.47□□□□□ -0.25
TUBGCP2-210ENST00000543663 BATF3Q9NR55 127 aa13.47□□□□□ -0.25
TUBGCP2-210ENST00000543663 STAP1Q9ULZ2 295 aa13.47□□□□□ -0.25
TUBGCP2-210ENST00000543663 PIN4Q9Y237 131 aaKnown RBP13.47□□□□□ -0.25
TUBGCP2-210ENST00000543663 RPS6KL1Q9Y6S9 549 aa13.47□□□□□ -0.25
TUBGCP2-210ENST00000543663 MEI4A8MW99 385 aa13.46□□□□□ -0.25
TUBGCP2-210ENST00000543663 UGCGQ16739 394 aa13.46□□□□□ -0.25
TUBGCP2-210ENST00000543663 GJC2Q5T442 439 aaPredicted RBP13.46□□□□□ -0.25
TUBGCP2-210ENST00000543663 C16orf87Q6PH81 154 aa13.46□□□□□ -0.25
TUBGCP2-210ENST00000543663 MOXD1Q6UVY6 613 aa13.46□□□□□ -0.25
TUBGCP2-210ENST00000543663 SLC10A4Q96EP9 437 aa13.46□□□□□ -0.25
TUBGCP2-210ENST00000543663 INPP4AQ96PE3 977 aaPredicted RBP13.46□□□□□ -0.25
TUBGCP2-210ENST00000543663 CAAP1Q9H8G2 361 aa13.46□□□□□ -0.25
TUBGCP2-210ENST00000543663 THEGQ9P2T0 379 aa13.46□□□□□ -0.25
TUBGCP2-210ENST00000543663 SYNDIG1LA6NDD5 238 aa13.46□□□□□ -0.25
TUBGCP2-210ENST00000543663 ENTPD5O75356 428 aa13.46□□□□□ -0.25
TUBGCP2-210ENST00000543663 MYL3P08590 195 aa13.46□□□□□ -0.25
TUBGCP2-210ENST00000543663 NUDT2P50583 147 aa13.46□□□□□ -0.25
TUBGCP2-210ENST00000543663 CAPRIN1Q14444 709 aaKnown RBP13.46□□□□□ -0.25
TUBGCP2-210ENST00000543663 DENND5BQ6ZUT9 1274 aa13.46□□□□□ -0.25
TUBGCP2-210ENST00000543663 BEST2Q8NFU1 509 aa13.46□□□□□ -0.25
TUBGCP2-210ENST00000543663 LNX1Q8TBB1 728 aaPredicted RBP13.46□□□□□ -0.25
TUBGCP2-210ENST00000543663 KAT2BQ92831 832 aa13.46□□□□□ -0.25
TUBGCP2-210ENST00000543663 NMD3Q96D46 503 aaKnown RBP13.46□□□□□ -0.25
TUBGCP2-210ENST00000543663 NINJ2Q9NZG7 142 aa13.46□□□□□ -0.25
TUBGCP2-210ENST00000543663 ANKRD63C9JTQ0 380 aa13.46□□□□□ -0.26
TUBGCP2-210ENST00000543663 GOLGA8TH3BQL2 631 aa13.46□□□□□ -0.26
TUBGCP2-210ENST00000543663 M0R2N6 131 aa13.46□□□□□ -0.26
TUBGCP2-210ENST00000543663 PLSCR1O15162 318 aa13.46□□□□□ -0.26
TUBGCP2-210ENST00000543663 TSPAN3O60637 253 aa13.46□□□□□ -0.26
TUBGCP2-210ENST00000543663 HADHAP40939 763 aa13.46□□□□□ -0.26
TUBGCP2-210ENST00000543663 RARS2Q5T160 578 aaKnown RBP13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms