RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 DAGLBQ8NCG7 672 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 C3orf58Q8NDZ4 430 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 ETNPPLQ8TBG4 499 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 CPLX3Q8WVH0 158 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 TCP11Q8WWU5 503 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 SCG3Q8WXD2 468 aaKnown RBP5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 ADAMTS14Q8WXS8 1223 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 PIGKQ92643 395 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 NAP1L5Q96NT1 182 aaPredicted RBP5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 UBL7Q96S82 380 aaPredicted RBP5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 SPON2Q9BUD6 331 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 NFKBIZQ9BYH8 718 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 SLITRK6Q9H5Y7 841 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 C12orf49Q9H741 205 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 C6orf50Q9HD87 102 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 XPNPEP1Q9NQW7 623 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 ASAH2Q9NR71 780 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 TMEM74BQ9NUR3 256 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 RBM28Q9NW13 759 aaKnown RBP5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 OBP2AQ9NY56 170 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 DKK4Q9UBT3 224 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 MBD1Q9UIS9 605 aaPredicted RBP5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 MCM8Q9UJA3 840 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 PLAAQ9Y263 795 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 INVSQ9Y283 1065 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 TEP1Q99973 2627 aaKnown RBP5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 ATMQ13315 3056 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 TEX15Q9BXT5 2789 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 SHROOM3Q8TF72 1996 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 KNTC1P50748 2209 aa5.31□□□□□ -1.56
NPIPB4-219ENST00000543660 COL6A6A6NMZ7 2263 aa5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 A0A087WV48 116 aa5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 CYP3A7-CYP3A51PA0A087WV96 503 aa5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 ZBTB39O15060 712 aa5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 TBX3O15119 743 aa5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 ATXN7O15265 892 aaPredicted RBP5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 TRAPPC3O43617 180 aa5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 RECQL4O94761 1208 aa5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 PRAMEF12O95522 483 aa5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 PRKCBP05771 671 aa5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 CD59P13987 128 aa5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 CYP3A7P24462 503 aa5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 CHMLP26374 656 aa5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 NASPP49321 788 aaPredicted RBP5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 CLCNKBP51801 687 aa5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 DGKEP52429 567 aa5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 ARPP19P56211 112 aa5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 DHX8Q14562 1220 aaKnown RBP5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 DMC1Q14565 340 aa5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 RTN1Q16799 776 aa5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 UPP1Q16831 310 aa5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 CT47A1Q5JQC4 288 aaPredicted RBP5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 INTS6LQ5JSJ4 861 aaKnown RBP5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 TPGS2Q68CL5 300 aa5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 NAIF1Q69YI7 327 aaPredicted RBP5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 SLC23A3Q6PIS1 610 aa5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 GAREM2Q75VX8 874 aa5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 HAUS6Q7Z4H7 955 aa5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 C11orf74Q86VG3 221 aa5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 CHD1LQ86WJ1 897 aa5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 TRIM22Q8IYM9 498 aa5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 ELMOD1Q8N336 334 aa5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 ZNF843Q8N446 348 aa5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 PNPLA1Q8N8W4 532 aa5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 RPLP0P6Q8NHW5 317 aa5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 ASAP3Q8TDY4 903 aa5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 EZH1Q92800 747 aaPredicted RBP5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 PPP1R10Q96QC0 940 aaKnown RBP5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 FAM83CQ9BQN1 747 aa5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 NUSAP1Q9BXS6 441 aaKnown RBP5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 KRTAP9-2Q9BYQ4 174 aa5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 HPS4Q9NQG7 708 aa5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 FAM8A1Q9UBU6 413 aa5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 AFF4Q9UHB7 1163 aaKnown RBP5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 FBXL5Q9UKA1 691 aa5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 MAFFQ9ULX9 164 aa5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 PCDHB11Q9Y5F2 797 aa5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 RBM8AQ9Y5S9 174 aaKnown RBP5.3□□□□□ -1.56
NPIPB4-219ENST00000543660 SPTAN1Q13813 2472 aaKnown RBP5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 KIF26AQ9ULI4 1882 aaPredicted RBP5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 J3QKU1 62 aa5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 TNFRSF10BO14763 440 aa5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 SGSM2O43147 1006 aa5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 ZBTB43O43298 467 aa5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 VNN2O95498 520 aa5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 TDP2O95551 362 aa5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 LDHAP00338 332 aaKnown RBP5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 RPLP1P05386 114 aaKnown RBP5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 GSPT1P15170 499 aaKnown RBP5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 DRD1P21728 446 aa5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 GLRA2P23416 452 aa5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 GNA11P29992 359 aa5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 YWHABP31946 246 aaKnown RBP5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 ARL2P36404 184 aa5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 PTGER3P43115 390 aa5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 DHPSP49366 369 aaPredicted RBP5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 MCM2P49736 904 aa5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 GALK1P51570 392 aa5.29□□□□□ -1.56
NPIPB4-219ENST00000543660 NUCB1Q02818 461 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms