RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 C17orf50Q8WW18 174 aa6.47□□□□□ -1.37
XRCC4-206ENST00000542685 AHCYL2Q96HN2 611 aaKnown RBP6.47□□□□□ -1.37
XRCC4-206ENST00000542685 TMX3Q96JJ7 454 aa6.47□□□□□ -1.37
XRCC4-206ENST00000542685 ZNF396Q96N95 335 aaPredicted RBP6.47□□□□□ -1.37
XRCC4-206ENST00000542685 ORAI2Q96SN7 254 aa6.47□□□□□ -1.37
XRCC4-206ENST00000542685 RIOX1Q9H6W3 641 aa6.47□□□□□ -1.37
XRCC4-206ENST00000542685 PDRG1Q9NUG6 133 aa6.47□□□□□ -1.37
XRCC4-206ENST00000542685 CWC25Q9NXE8 425 aaPredicted RBP6.47□□□□□ -1.37
XRCC4-206ENST00000542685 GOLGA6AQ9NYA3 693 aa6.47□□□□□ -1.37
XRCC4-206ENST00000542685 UTP6Q9NYH9 597 aaKnown RBP6.47□□□□□ -1.37
XRCC4-206ENST00000542685 DKK2Q9UBU2 259 aa6.47□□□□□ -1.37
XRCC4-206ENST00000542685 ITGB1BP2Q9UKP3 347 aa6.47□□□□□ -1.37
XRCC4-206ENST00000542685 BLOC1S6Q9UL45 172 aa6.47□□□□□ -1.37
XRCC4-206ENST00000542685 TNNQ9UQP3 1299 aa6.47□□□□□ -1.37
XRCC4-206ENST00000542685 ATP11BQ9Y2G3 1177 aa6.47□□□□□ -1.37
XRCC4-206ENST00000542685 ATP10DQ9P241 1426 aa6.47□□□□□ -1.37
XRCC4-206ENST00000542685 PNPLA7Q6ZV29 1317 aa6.47□□□□□ -1.37
XRCC4-206ENST00000542685 TMEM131LA2VDJ0 1609 aa6.47□□□□□ -1.37
XRCC4-206ENST00000542685 A0A1W2PP64 1363 aa6.46□□□□□ -1.37
XRCC4-206ENST00000542685 ATRNL1Q5VV63 1379 aa6.46□□□□□ -1.37
XRCC4-206ENST00000542685 PREX1Q8TCU6 1659 aa6.46□□□□□ -1.37
XRCC4-206ENST00000542685 GOLGA6L9A6NEM1 432 aa6.46□□□□□ -1.38
XRCC4-206ENST00000542685 ERC2O15083 957 aa6.46□□□□□ -1.38
XRCC4-206ENST00000542685 RTN3O95197 1032 aaPredicted RBP6.46□□□□□ -1.38
XRCC4-206ENST00000542685 FESP07332 822 aa6.46□□□□□ -1.38
XRCC4-206ENST00000542685 RAP2AP10114 183 aa6.46□□□□□ -1.38
XRCC4-206ENST00000542685 CPEP16870 476 aa6.46□□□□□ -1.38
XRCC4-206ENST00000542685 TGM1P22735 817 aa6.46□□□□□ -1.38
XRCC4-206ENST00000542685 GCKP35557 465 aa6.46□□□□□ -1.38
XRCC4-206ENST00000542685 SREBF1P36956 1147 aa6.46□□□□□ -1.38
XRCC4-206ENST00000542685 RAB27AP51159 221 aa6.46□□□□□ -1.38
XRCC4-206ENST00000542685 RBM5P52756 815 aaKnown RBP eCLIP6.46□□□□□ -1.38
XRCC4-206ENST00000542685 DEUP1Q05D60 604 aa6.46□□□□□ -1.38
XRCC4-206ENST00000542685 EXOSC9Q06265 439 aaKnown RBP6.46□□□□□ -1.38
XRCC4-206ENST00000542685 IFFO1Q0D2I5 559 aa6.46□□□□□ -1.38
XRCC4-206ENST00000542685 CUL4AQ13619 759 aa6.46□□□□□ -1.38
XRCC4-206ENST00000542685 TP53BP2Q13625 1128 aa6.46□□□□□ -1.38
XRCC4-206ENST00000542685 TUBB2AQ13885 445 aa6.46□□□□□ -1.38
XRCC4-206ENST00000542685 NOMO1Q15155 1222 aa6.46□□□□□ -1.38
XRCC4-206ENST00000542685 TBC1D25Q3MII6 688 aa6.46□□□□□ -1.38
XRCC4-206ENST00000542685 RRP12Q5JTH9 1297 aaKnown RBP6.46□□□□□ -1.38
XRCC4-206ENST00000542685 AFMIDQ63HM1 303 aa6.46□□□□□ -1.38
XRCC4-206ENST00000542685 MICALCLQ6ZW33 695 aa6.46□□□□□ -1.38
XRCC4-206ENST00000542685 MED25Q71SY5 747 aa6.46□□□□□ -1.38
XRCC4-206ENST00000542685 YTHDF3Q7Z739 585 aaKnown RBP6.46□□□□□ -1.38
XRCC4-206ENST00000542685 NALCNQ8IZF0 1738 aa6.46□□□□□ -1.38
XRCC4-206ENST00000542685 TDRD7Q8NHU6 1098 aaKnown RBP6.46□□□□□ -1.38
XRCC4-206ENST00000542685 ZFAND2BQ8WV99 257 aa6.46□□□□□ -1.38
XRCC4-206ENST00000542685 CAVIN3Q969G5 261 aa6.46□□□□□ -1.38
XRCC4-206ENST00000542685 HOOK2Q96ED9 719 aa6.46□□□□□ -1.38
XRCC4-206ENST00000542685 ADAM2Q99965 735 aa6.46□□□□□ -1.38
XRCC4-206ENST00000542685 MRI1Q9BV20 369 aa6.46□□□□□ -1.38
XRCC4-206ENST00000542685 TUBB2BQ9BVA1 445 aa6.46□□□□□ -1.38
XRCC4-206ENST00000542685 TRIM7Q9C029 511 aa6.46□□□□□ -1.38
XRCC4-206ENST00000542685 MAF1Q9H063 256 aa6.46□□□□□ -1.38
XRCC4-206ENST00000542685 LDAHQ9H6V9 325 aa6.46□□□□□ -1.38
XRCC4-206ENST00000542685 DNAJC28Q9NX36 388 aa6.46□□□□□ -1.38
XRCC4-206ENST00000542685 SCOCQ9UIL1 159 aa6.46□□□□□ -1.38
XRCC4-206ENST00000542685 GGA2Q9UJY4 613 aa6.46□□□□□ -1.38
XRCC4-206ENST00000542685 MAP2P11137 1827 aaKnown RBP6.46□□□□□ -1.38
XRCC4-206ENST00000542685 ARHGEF10O15013 1369 aa6.45□□□□□ -1.38
XRCC4-206ENST00000542685 RGPD1P0DJD0 1748 aa6.45□□□□□ -1.38
XRCC4-206ENST00000542685 EBAG9O00559 213 aa6.45□□□□□ -1.38
XRCC4-206ENST00000542685 EYA4O95677 639 aa6.45□□□□□ -1.38
XRCC4-206ENST00000542685 OSMP13725 252 aa6.45□□□□□ -1.38
XRCC4-206ENST00000542685 GSPT1P15170 499 aaKnown RBP6.45□□□□□ -1.38
XRCC4-206ENST00000542685 ALDH1B1P30837 517 aa6.45□□□□□ -1.38
XRCC4-206ENST00000542685 ZNF75DP51815 510 aa6.45□□□□□ -1.38
XRCC4-206ENST00000542685 CLNS1AP54105 237 aaKnown RBP6.45□□□□□ -1.38
XRCC4-206ENST00000542685 PPP3CAQ08209 521 aa6.45□□□□□ -1.38
XRCC4-206ENST00000542685 SP140Q13342 867 aa6.45□□□□□ -1.38
XRCC4-206ENST00000542685 DCTN1Q14203 1278 aa6.45□□□□□ -1.38
XRCC4-206ENST00000542685 HSP90AB2PQ58FF8 381 aa6.45□□□□□ -1.38
XRCC4-206ENST00000542685 AGAP9Q5VTM2 703 aa6.45□□□□□ -1.38
XRCC4-206ENST00000542685 HHATQ5VTY9 493 aa6.45□□□□□ -1.38
XRCC4-206ENST00000542685 TSHZ3Q63HK5 1081 aa6.45□□□□□ -1.38
XRCC4-206ENST00000542685 DPY19L2P1Q6NXN4 242 aa6.45□□□□□ -1.38
XRCC4-206ENST00000542685 OLFML1Q6UWY5 402 aa6.45□□□□□ -1.38
XRCC4-206ENST00000542685 LRRC31Q6UY01 552 aa6.45□□□□□ -1.38
XRCC4-206ENST00000542685 B4GALNT4Q76KP1 1039 aa6.45□□□□□ -1.38
XRCC4-206ENST00000542685 SPATA21Q7Z572 469 aa6.45□□□□□ -1.38
XRCC4-206ENST00000542685 CCAR2Q8N163 923 aaKnown RBP6.45□□□□□ -1.38
XRCC4-206ENST00000542685 OR56A1Q8NGH5 318 aa6.45□□□□□ -1.38
XRCC4-206ENST00000542685 COG1Q8WTW3 980 aa6.45□□□□□ -1.38
XRCC4-206ENST00000542685 LZICQ8WZA0 190 aa6.45□□□□□ -1.38
XRCC4-206ENST00000542685 RSRC1Q96IZ7 334 aaKnown RBP6.45□□□□□ -1.38
XRCC4-206ENST00000542685 SLX1AQ9BQ83 275 aa6.45□□□□□ -1.38
XRCC4-206ENST00000542685 PAGR1Q9BTK6 254 aa6.45□□□□□ -1.38
XRCC4-206ENST00000542685 ADI1Q9BV57 179 aa6.45□□□□□ -1.38
XRCC4-206ENST00000542685 SENP6Q9GZR1 1112 aaPredicted RBP6.45□□□□□ -1.38
XRCC4-206ENST00000542685 VIPAS39Q9H9C1 493 aa6.45□□□□□ -1.38
XRCC4-206ENST00000542685 TRPV5Q9NQA5 729 aa6.45□□□□□ -1.38
XRCC4-206ENST00000542685 RNF181Q9P0P0 153 aa6.45□□□□□ -1.38
XRCC4-206ENST00000542685 NOB1Q9ULX3 412 aaKnown RBP6.45□□□□□ -1.38
XRCC4-206ENST00000542685 LRRC37A3O60309 1634 aa6.45□□□□□ -1.38
XRCC4-206ENST00000542685 C3P01024 1663 aa6.45□□□□□ -1.38
XRCC4-206ENST00000542685 TCHHQ07283 1943 aa6.44□□□□□ -1.38
XRCC4-206ENST00000542685 POGZQ7Z3K3 1410 aa6.44□□□□□ -1.38
XRCC4-206ENST00000542685 YTHDC2Q9H6S0 1430 aaKnown RBP6.44□□□□□ -1.38
XRCC4-206ENST00000542685 RIMBP3CA6NJZ7 1639 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms