RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.06□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 TMEM130Q8N3G9 435 aa13.06□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 SLC4A11Q8NBS3 891 aa13.06□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 OR6B3Q8NGW1 331 aa13.06□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 SLC30A5Q8TAD4 765 aa13.06□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 MSLNLQ96KJ4 702 aa13.06□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 MRPL45Q9BRJ2 306 aaKnown RBP13.06□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 ZNF518BQ9C0D4 1074 aa13.06□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 CWH43Q9H720 699 aa13.06□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 AAASQ9NRG9 546 aa13.06□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 DNAJB4Q9UDY4 337 aa13.06□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 ADAMTS1Q9UHI8 967 aa13.06□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 INTUQ9ULD6 942 aa13.06□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 NENFQ9UMX5 172 aa13.06□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 CEP83Q9Y592 693 aa13.06□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 KIAA1671Q9BY89 1806 aa13.05□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 THAP12O43422 761 aa13.05□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 TADA2AO75478 443 aa13.05□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 MSNP26038 577 aaKnown RBP13.05□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 FMO1Q01740 532 aa13.05□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 SGO2Q562F6 1265 aa13.05□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 WSCD1Q658N2 575 aa13.05□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 GPR65Q8IYL9 337 aa13.05□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 THEM5Q8N1Q8 247 aa13.05□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 OLIG1Q8TAK6 271 aa13.05□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 ZNF606Q8WXB4 792 aa13.05□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 ZNF558Q96NG5 402 aa13.05□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 TWNKQ96RR1 684 aa13.05□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 ACBD6Q9BR61 282 aa13.05□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.05□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 ELOVL4Q9GZR5 314 aa13.05□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 LHX5Q9H2C1 402 aa13.05□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 MARCH5Q9NX47 278 aa13.05□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 NAGPAQ9UK23 515 aa13.05□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 CDH9Q9ULB4 789 aa13.05□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 PYCARDQ9ULZ3 195 aa13.05□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 PRG3Q9Y2Y8 225 aaPredicted RBP13.05□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 RWDD3Q9Y3V2 267 aa13.05□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 PCDHGC5Q9Y5F6 944 aa13.05□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 ADGRG1Q9Y653 693 aa13.05□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 A0A087X0T9 212 aa13.04□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 DDX3XO00571 662 aaKnown RBP eCLIP13.04□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 LINC01565O15544 149 aa13.04□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 OAZ2O95190 189 aa13.04□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 EFEMP2O95967 443 aa13.04□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 CYP1A1P04798 512 aaPredicted RBP13.04□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 ITGB1P05556 798 aa13.04□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 FAM228BP0C875 321 aa13.04□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 SETSIPP0DME0 302 aa13.04□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 CHRNB2P17787 502 aa13.04□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 FGFR3P22607 806 aa13.04□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 CDH5P33151 784 aaPredicted RBP13.04□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 BRCC3P46736 316 aa13.04□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 VAV2P52735 878 aa13.04□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 YWHAHQ04917 246 aaPredicted RBP13.04□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 GFPT1Q06210 699 aaPredicted RBP13.04□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 MTF1Q14872 753 aa13.04□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 MAPRE1Q15691 268 aaKnown RBP13.04□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 CNGA2Q16280 664 aa13.04□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 PAN2Q504Q3 1202 aaKnown RBP13.04□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 OVOS1Q6IE37 1185 aa13.04□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 FUT10Q6P4F1 479 aa13.04□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 ALKBH5Q6P6C2 394 aaKnown RBP13.04□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 KCNT2Q6UVM3 1135 aa13.04□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 TOGARAM2Q6ZUX3 1019 aa13.04□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 GLYCTKQ8IVS8 523 aa13.04□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 RNF168Q8IYW5 571 aaPredicted RBP13.04□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 FIBCD1Q8N539 461 aa13.04□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 B3GALNT2Q8NCR0 500 aa13.04□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 SMRP1Q8NCR6 262 aa13.04□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 LNX1Q8TBB1 728 aaPredicted RBP13.04□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 SLC20A1Q8WUM9 679 aa13.04□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 CLP1Q92989 425 aaKnown RBP13.04□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 TRIM11Q96F44 468 aa13.04□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 IGSF21Q96ID5 467 aa13.04□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 TSGA10Q9BZW7 698 aa13.04□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 PDCL3Q9H2J4 239 aa13.04□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 DDX43Q9NXZ2 648 aaKnown RBP13.04□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.04□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 CACNG4Q9UBN1 327 aa13.04□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 HMGXB4Q9UGU5 601 aa13.04□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.04□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 PPP2R2CQ9Y2T4 447 aa13.04□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 MYO10Q9HD67 2058 aa13.04□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 VWA8A3KMH1 1905 aa13.03□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 FANCMQ8IYD8 2048 aa13.03□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 O00370 1275 aa13.03□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 RTN2O75298 545 aa13.03□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 MMEP08473 750 aa13.03□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 CD19P15391 556 aa13.03□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 GTF2F1P35269 517 aaKnown RBP eCLIP13.03□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 CENPCQ03188 943 aa13.03□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 CLEC16AQ2KHT3 1053 aa13.03□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 ZNF394Q53GI3 561 aa13.03□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 ZNF280DQ6N043 979 aa13.03□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 LCLAT1Q6UWP7 414 aa13.03□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 OSTM1Q86WC4 334 aa13.03□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 CCAR2Q8N163 923 aaKnown RBP13.03□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 SLC39A11Q8N1S5 342 aa13.03□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 TMEM35BQ8NCS4 154 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms