RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 SMG9Q9H0W8 520 aaKnown RBP16.71■□□□□ 0.27
VPS33A-206ENST00000542310 VRTNQ9H8Y1 702 aa16.71■□□□□ 0.27
VPS33A-206ENST00000542310 CRTAC1Q9NQ79 661 aa16.71■□□□□ 0.27
VPS33A-206ENST00000542310 CCL26Q9Y258 94 aa16.71■□□□□ 0.27
VPS33A-206ENST00000542310 GPR179Q6PRD1 2367 aa16.7■□□□□ 0.26
VPS33A-206ENST00000542310 MYO16Q9Y6X6 1858 aa16.7■□□□□ 0.26
VPS33A-206ENST00000542310 TRAV19A0A0A6YYK7 116 aa16.7■□□□□ 0.26
VPS33A-206ENST00000542310 EXOC3O60645 756 aa16.7■□□□□ 0.26
VPS33A-206ENST00000542310 PFKFB1P16118 471 aa16.7■□□□□ 0.26
VPS33A-206ENST00000542310 CMA1P23946 247 aa16.7■□□□□ 0.26
VPS33A-206ENST00000542310 LMO2P25791 158 aa16.7■□□□□ 0.26
VPS33A-206ENST00000542310 CXCL12P48061 93 aa16.7■□□□□ 0.26
VPS33A-206ENST00000542310 KRT85P78386 507 aa16.7■□□□□ 0.26
VPS33A-206ENST00000542310 TNK2Q07912 1038 aa16.7■□□□□ 0.26
VPS33A-206ENST00000542310 GAS6Q14393 721 aa16.7■□□□□ 0.26
VPS33A-206ENST00000542310 PDGFRLQ15198 375 aa16.7■□□□□ 0.26
VPS33A-206ENST00000542310 WDR44Q5JSH3 913 aa16.7■□□□□ 0.26
VPS33A-206ENST00000542310 TSSK4Q6SA08 328 aa16.7■□□□□ 0.26
VPS33A-206ENST00000542310 GPIHBP1Q8IV16 184 aa16.7■□□□□ 0.26
VPS33A-206ENST00000542310 SCN4BQ8IWT1 228 aa16.7■□□□□ 0.26
VPS33A-206ENST00000542310 KIAA0895Q8NCT3 520 aa16.7■□□□□ 0.26
VPS33A-206ENST00000542310 MYCBPAPQ8TBZ2 947 aa16.7■□□□□ 0.26
VPS33A-206ENST00000542310 CCDC127Q96BQ5 260 aa16.7■□□□□ 0.26
VPS33A-206ENST00000542310 GZF1Q9H116 711 aaPredicted RBP16.7■□□□□ 0.26
VPS33A-206ENST00000542310 HPS4Q9NQG7 708 aa16.7■□□□□ 0.26
VPS33A-206ENST00000542310 SERTAD1Q9UHV2 236 aa16.7■□□□□ 0.26
VPS33A-206ENST00000542310 HPSEQ9Y251 543 aa16.7■□□□□ 0.26
VPS33A-206ENST00000542310 ATP2C2O75185 946 aa16.69■□□□□ 0.26
VPS33A-206ENST00000542310 CST3P01034 146 aaPredicted RBP16.69■□□□□ 0.26
VPS33A-206ENST00000542310 USP17L7P0C7H9 530 aa16.69■□□□□ 0.26
VPS33A-206ENST00000542310 ANXA13P27216 316 aa16.69■□□□□ 0.26
VPS33A-206ENST00000542310 ID4P47928 161 aa16.69■□□□□ 0.26
VPS33A-206ENST00000542310 CLDN10P78369 228 aa16.69■□□□□ 0.26
VPS33A-206ENST00000542310 AMPD2Q01433 879 aa16.69■□□□□ 0.26
VPS33A-206ENST00000542310 SATB1Q01826 763 aa16.69■□□□□ 0.26
VPS33A-206ENST00000542310 TRPC3Q13507 836 aa16.69■□□□□ 0.26
VPS33A-206ENST00000542310 RUNX3Q13761 415 aa16.69■□□□□ 0.26
VPS33A-206ENST00000542310 MTF1Q14872 753 aa16.69■□□□□ 0.26
VPS33A-206ENST00000542310 PON2Q15165 354 aa16.69■□□□□ 0.26
VPS33A-206ENST00000542310 ZNF77Q15935 545 aa16.69■□□□□ 0.26
VPS33A-206ENST00000542310 CC2D1AQ6P1N0 951 aaPredicted RBP16.69■□□□□ 0.26
VPS33A-206ENST00000542310 DENND5BQ6ZUT9 1274 aa16.69■□□□□ 0.26
VPS33A-206ENST00000542310 ERMP1Q7Z2K6 904 aa16.69■□□□□ 0.26
VPS33A-206ENST00000542310 GRAMD1CQ8IYS0 662 aa16.69■□□□□ 0.26
VPS33A-206ENST00000542310 GPR161Q8N6U8 529 aaKnown RBP16.69■□□□□ 0.26
VPS33A-206ENST00000542310 EXOC4Q96A65 974 aa16.69■□□□□ 0.26
VPS33A-206ENST00000542310 PAGE5Q96GU1 130 aa16.69■□□□□ 0.26
VPS33A-206ENST00000542310 PCED1BQ96HM7 432 aa16.69■□□□□ 0.26
VPS33A-206ENST00000542310 MRPL45Q9BRJ2 306 aaKnown RBP16.69■□□□□ 0.26
VPS33A-206ENST00000542310 TTLL2Q9BWV7 592 aa16.69■□□□□ 0.26
VPS33A-206ENST00000542310 ELOVL4Q9GZR5 314 aa16.69■□□□□ 0.26
VPS33A-206ENST00000542310 XYLT2Q9H1B5 865 aa16.69■□□□□ 0.26
VPS33A-206ENST00000542310 SNX25Q9H3E2 840 aa16.69■□□□□ 0.26
VPS33A-206ENST00000542310 GKN1Q9NS71 199 aa16.69■□□□□ 0.26
VPS33A-206ENST00000542310 NCDNQ9UBB6 729 aa16.69■□□□□ 0.26
VPS33A-206ENST00000542310 FAM237AA0A1B0GTK4 181 aa16.68■□□□□ 0.26
VPS33A-206ENST00000542310 CKMP06732 381 aa16.68■□□□□ 0.26
VPS33A-206ENST00000542310 BDNFP23560 247 aa16.68■□□□□ 0.26
VPS33A-206ENST00000542310 HOXA6P31267 233 aa16.68■□□□□ 0.26
VPS33A-206ENST00000542310 GNL1P36915 607 aaPredicted RBP16.68■□□□□ 0.26
VPS33A-206ENST00000542310 PPP3CCP48454 512 aa16.68■□□□□ 0.26
VPS33A-206ENST00000542310 NOP14P78316 857 aaKnown RBP16.68■□□□□ 0.26
VPS33A-206ENST00000542310 CYP27A1Q02318 531 aa16.68■□□□□ 0.26
VPS33A-206ENST00000542310 STK4Q13043 487 aa16.68■□□□□ 0.26
VPS33A-206ENST00000542310 KCNB1Q14721 858 aa16.68■□□□□ 0.26
VPS33A-206ENST00000542310 WDR72Q3MJ13 1102 aa16.68■□□□□ 0.26
VPS33A-206ENST00000542310 KMT5BQ4FZB7 885 aa16.68■□□□□ 0.26
VPS33A-206ENST00000542310 TMEM196Q5HYL7 178 aa16.68■□□□□ 0.26
VPS33A-206ENST00000542310 KIAA1958Q8N8K9 716 aa16.68■□□□□ 0.26
VPS33A-206ENST00000542310 RIN3Q8TB24 985 aa16.68■□□□□ 0.26
VPS33A-206ENST00000542310 ZNF516Q92618 1163 aa16.68■□□□□ 0.26
VPS33A-206ENST00000542310 SPATA32Q96LK8 384 aa16.68■□□□□ 0.26
VPS33A-206ENST00000542310 C8orf48Q96LL4 319 aa16.68■□□□□ 0.26
VPS33A-206ENST00000542310 KCTD10Q9H3F6 313 aa16.68■□□□□ 0.26
VPS33A-206ENST00000542310 TRPC7Q9HCX4 862 aa16.68■□□□□ 0.26
VPS33A-206ENST00000542310 RBM12Q9NTZ6 932 aaKnown RBP16.68■□□□□ 0.26
VPS33A-206ENST00000542310 DMAC2Q9NW81 257 aa16.68■□□□□ 0.26
VPS33A-206ENST00000542310 GCNT4Q9P109 453 aa16.68■□□□□ 0.26
VPS33A-206ENST00000542310 ARHGAP26Q9UNA1 814 aa16.68■□□□□ 0.26
VPS33A-206ENST00000542310 WDR87Q6ZQQ6 2873 aa16.67■□□□□ 0.26
VPS33A-206ENST00000542310 PDXKO00764 312 aa16.67■□□□□ 0.26
VPS33A-206ENST00000542310 TRDMT1O14717 391 aaKnown RBP16.67■□□□□ 0.26
VPS33A-206ENST00000542310 KIF20AO95235 890 aa16.67■□□□□ 0.26
VPS33A-206ENST00000542310 CNR2P34972 360 aa16.67■□□□□ 0.26
VPS33A-206ENST00000542310 GRIK1P39086 918 aa16.67■□□□□ 0.26
VPS33A-206ENST00000542310 MYL6P60660 151 aa16.67■□□□□ 0.26
VPS33A-206ENST00000542310 MDH1BQ5I0G3 518 aa16.67■□□□□ 0.26
VPS33A-206ENST00000542310 TDRD10Q5VZ19 366 aaKnown RBP16.67■□□□□ 0.26
VPS33A-206ENST00000542310 Q6ZS52 159 aa16.67■□□□□ 0.26
VPS33A-206ENST00000542310 KIAA2013Q8IYS2 634 aa16.67■□□□□ 0.26
VPS33A-206ENST00000542310 CPA6Q8N4T0 437 aa16.67■□□□□ 0.26
VPS33A-206ENST00000542310 B3GALNT2Q8NCR0 500 aa16.67■□□□□ 0.26
VPS33A-206ENST00000542310 OR6B3Q8NGW1 331 aa16.67■□□□□ 0.26
VPS33A-206ENST00000542310 TTC8Q8TAM2 541 aa16.67■□□□□ 0.26
VPS33A-206ENST00000542310 PARD3BQ8TEW8 1205 aa16.67■□□□□ 0.26
VPS33A-206ENST00000542310 OSCP1Q8WVF1 389 aa16.67■□□□□ 0.26
VPS33A-206ENST00000542310 ATP2A3Q93084 1043 aa16.67■□□□□ 0.26
VPS33A-206ENST00000542310 EBF3Q9H4W6 596 aa16.67■□□□□ 0.26
VPS33A-206ENST00000542310 NME7Q9Y5B8 376 aa16.67■□□□□ 0.26
VPS33A-206ENST00000542310 ATP6V1DQ9Y5K8 247 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms